Literature DB >> 22154393

Molecular phylogeny and morphological evolution of the Acantharia (Radiolaria).

Johan Decelle1, Noritoshi Suzuki, Fredéric Mahé, Colomban de Vargas, Fabrice Not.   

Abstract

Acantharia are ubiquitous and abundant rhizarian protists in the world ocean. The skeleton made of strontium sulphate and the fact that certain harbour microalgal endosymbionts make them key planktonic players for the ecology of marine ecosystems. Based on morphological criteria, the current taxonomy of Acantharia was established by W.T. Schewiakoff in 1926, since when no major revision has been undertaken. Here, we established the first comprehensive molecular phylogeny from single morphologically-identified acantharian cells, isolated from various oceans. Our phylogenetic analyses based on 78 18S rDNA and 107 partial 28S rDNA revealed the existence of 6 main clades, sub-divided into 13 sub-clades. The polyphyletic nature of acantharian families and genera demonstrates the need for revision of the current taxonomy. This molecular phylogeny, which highlights the taxonomic relevance of specific morphological criteria, such as the presence of a shell and the organisation of the central junction, provides a robust phylogenetic framework for future taxonomic emendation. Finally, mapping all the existing environmental sequences available to date from different marine ecosystems onto our reference phylogeny unveiled another 3 clades and improved the understanding of the biogeography and ecology of Acantharia.
Copyright © 2011 Elsevier GmbH. All rights reserved.

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Year:  2011        PMID: 22154393     DOI: 10.1016/j.protis.2011.10.002

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  12 in total

1.  An original mode of symbiosis in open ocean plankton.

Authors:  Johan Decelle; Ian Probert; Lucie Bittner; Yves Desdevises; Sébastien Colin; Colomban de Vargas; Martí Galí; Rafel Simó; Fabrice Not
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

2.  Ancient DNA complements microfossil record in deep-sea subsurface sediments.

Authors:  Franck Lejzerowicz; Philippe Esling; Wojciech Majewski; Witold Szczuciński; Johan Decelle; Cyril Obadia; Pedro Martinez Arbizu; Jan Pawlowski
Journal:  Biol Lett       Date:  2013-05-08       Impact factor: 3.703

3.  Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria.

Authors:  Thomas Cavalier-Smith; Ema E Chao; Rhodri Lewis
Journal:  Protoplasma       Date:  2018-04-17       Impact factor: 3.356

4.  A de novo approach to disentangle partner identity and function in holobiont systems.

Authors:  Arnaud Meng; Camille Marchet; Erwan Corre; Pierre Peterlongo; Adriana Alberti; Corinne Da Silva; Patrick Wincker; Eric Pelletier; Ian Probert; Johan Decelle; Stéphane Le Crom; Fabrice Not; Lucie Bittner
Journal:  Microbiome       Date:  2018-06-09       Impact factor: 14.650

5.  Intra-host Symbiont Diversity and Extended Symbiont Maintenance in Photosymbiotic Acantharea (Clade F).

Authors:  Margaret Mars Brisbin; Lisa Y Mesrop; Mary M Grossmann; Satoshi Mitarai
Journal:  Front Microbiol       Date:  2018-08-27       Impact factor: 5.640

6.  Resolving cryptic species complexes in marine protists: phylogenetic haplotype networks meet global DNA metabarcoding datasets.

Authors:  Daniele De Luca; Roberta Piredda; Diana Sarno; Wiebe H C F Kooistra
Journal:  ISME J       Date:  2021-02-15       Impact factor: 10.302

7.  CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms.

Authors:  Jan Pawlowski; Stéphane Audic; Sina Adl; David Bass; Lassaâd Belbahri; Cédric Berney; Samuel S Bowser; Ivan Cepicka; Johan Decelle; Micah Dunthorn; Anna Maria Fiore-Donno; Gillian H Gile; Maria Holzmann; Regine Jahn; Miloslav Jirků; Patrick J Keeling; Martin Kostka; Alexander Kudryavtsev; Enrique Lara; Julius Lukeš; David G Mann; Edward A D Mitchell; Frank Nitsche; Maria Romeralo; Gary W Saunders; Alastair G B Simpson; Alexey V Smirnov; John L Spouge; Rowena F Stern; Thorsten Stoeck; Jonas Zimmermann; David Schindel; Colomban de Vargas
Journal:  PLoS Biol       Date:  2012-11-06       Impact factor: 8.029

8.  Diversity, ecology and biogeochemistry of cyst-forming acantharia (radiolaria) in the oceans.

Authors:  Johan Decelle; Patrick Martin; Katsiaryna Paborstava; David W Pond; Geraint Tarling; Frédéric Mahé; Colomban de Vargas; Richard Lampitt; Fabrice Not
Journal:  PLoS One       Date:  2013-01-11       Impact factor: 3.240

9.  Intracellular diversity of the V4 and V9 regions of the 18S rRNA in marine protists (radiolarians) assessed by high-throughput sequencing.

Authors:  Johan Decelle; Sarah Romac; Eriko Sasaki; Fabrice Not; Frédéric Mahé
Journal:  PLoS One       Date:  2014-08-04       Impact factor: 3.240

10.  The First Record and Classification of Planktonic Radiolarian (Phylum Retaria) and Phaeodarian (Phylum Cercozoa) in the Eastern Indian Ocean.

Authors:  Sonia Munir; Jun Sun; Steve L Morton
Journal:  Biology (Basel)       Date:  2021-03-08
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