| Literature DB >> 22152674 |
Ellen Tijsse-Klasen1, Marieta Braks, Ernst-Jan Scholte, Hein Sprong.
Abstract
BACKGROUND: Ixodiphagus hookeri is a parasitic wasp of ixodid ticks around the world. It has been studied as a potential bio-control agent for several tick species. We suspected that the presence of Wolbachia infected I. hookeri eggs in ticks is responsible for incidental detection of Wolbachia DNA in tick samples.Entities:
Mesh:
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Year: 2011 PMID: 22152674 PMCID: PMC3248373 DOI: 10.1186/1756-3305-4-228
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Primers used for amplification and sequencing of Ixodiphagus hookeri (Howard) DNA
| Primer | Target | sequence 5' → 3' | original name | Reference |
|---|---|---|---|---|
| 16S-F1 | 16S rRNA | cacctgtttatcaaaaacat | 16SWb | [ |
| 16S-F2 | 16S rRNA | ctgcagtattttgactgtacaaaggtagcataatc | -- | This study |
| 16S-R1 | 16S rRNA | cttaattcaacatcgaggtcgc | -- | modified from [ |
| 28S-F1 | 28S rRNA | aagagagagttcaagagtacgtg | -- | [ |
| 28S-F2 | 28S rRNA | actttcaggacccgtcttga | -- | R/C of 28S-R1 |
| 28S-R1 | 28S rRNA | tcaagacgggtcctgaaagt | D2-4057 R | [ |
| 28S-R2 | 28S rRNA | tagttcaccatctttcgggtccc | 28S-PM | [ |
| 28S-R3 | 28S rRNA | tcggaaggaaccagctacta | D3-4413 R | [ |
R/C: reverse-complement
Primers used for amplification and sequencing of Wolbachia DNA
| Primer | Target | sequence 5' → 3' | original name | Reference |
|---|---|---|---|---|
| wsp 81F | wsp gene | tggtccaataagtgatgaagaaac | wsp 81F | [ |
| wsp 691R | wsp gene | aaaaattaaacgctactcca | wsp 691R | [ |
| wspF2a | wsp gene | aaggccacagacattcataatccattaaaagcatc | -- | This study |
| wspF2b | wsp gene | gcaacaggcaaagaaaaggatagtccct | -- | This study |
| wspR2a | wsp gene | acagtgctgtaaaggactgtatgtcctcctttg | -- | This study |
| wspR2b | wsp gene | acagtgctgtaaaggactgtatgtcctcctttg | -- | This study |
Figure 1.
Figure 2Phylogenetic analysis of . Neighbor-joining trees with Kimura correction were based on wsp genes from this study and mined from GeneBank. Bootstrap proportions were calculated based on 500 replicates, only values < 80 are indicated.
Figure 3Locations in the Netherlands with PCR verified presence of . Drents-Friese Wold; 2. Boswachterij Hardenberg; 3. Landgoed Singraven; 4. Duin en Kruidberg; 5. Pyramide van Austerlitz; 6. Koninklijke Houtvesterijen Hoog Soeren; 7. Hullenberg; 8. Rijk van Nijmegen; 9. Kop van Schouwen; 10. Vrouwenpolder; 11. Dintelse Gorzen; 12. Vijlenerbos; Two of these sites (7 and 10) were found positive in the pilot study; the remaining sites were investigated in the prevalence study.
Figure 4Prevalence of the parasitic wasp . Error bars indicate 95% confidence intervals calculated with Mid-P exact test.
Association of Wolbachia wsp and I.hookeri 28S rRNA PCR results
| positive | 15 | 2 | 17 | |
| negative | 2 | 124 | 128 | |
| 17 | 128 | 143 | ||