Literature DB >> 22151277

DFT-based QSAR models to predict the antimycobacterial activity of chalcones.

Nilakshi Barua1, Pubalee Sarmah, Iftikar Hussain, Ramesh C Deka, Alak K Buragohain.   

Abstract

In this study, antimycobacterial activity of a set of synthesized chalcone derivatives against Mycobacterium tuberculosis H37Rv was investigated by quantitative structure-activity relationship (QSAR) analysis using density functional theory (DFT) and molecular mechanics (MM+)-based descriptors in both gas and solvent phases. The best molecular descriptors identified were hardness, E(HOMO) , MR(A-4) and MR(B-4') that contributed to the antimycobacterial activity of the chalcones as independent factors. The correlation of these four descriptors with their antimycobacterial activity increases with the inclusion of solvent medium, indicating their importance in studying biological activity. QSAR models revealed that in gas phase, lower values of E(HOMO) , MR(A-4) and MR(B-4') increase the antimycobacterial activity of the chalcone molecules. However, in solvent phase, lower values of E(HOMO) and MR(B-4') and higher values of MR(A-4) increase their activity.
© 2011 John Wiley & Sons A/S.

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Year:  2012        PMID: 22151277     DOI: 10.1111/j.1747-0285.2011.01289.x

Source DB:  PubMed          Journal:  Chem Biol Drug Des        ISSN: 1747-0277            Impact factor:   2.817


  4 in total

1.  Oxidation of disinfectants with Cl-substituted structure by a Fenton-like system Cu(2+)/H2O2 and analysis on their structure-reactivity relationship.

Authors:  Jianbiao Peng; Jianhua Li; Huanhuan Shi; Zunyao Wang; Shixiang Gao
Journal:  Environ Sci Pollut Res Int       Date:  2015-09-26       Impact factor: 4.223

2.  Synthesis, Spectra, and Theoretical Investigations of 1,3,5-Triazines Compounds as Ultraviolet Rays Absorber Based on Time-Dependent Density Functional Calculations and three-Dimensional Quantitative Structure-Property Relationship.

Authors:  Xueding Wang; Yilian Xu; Lu Yang; Xiang Lu; Hao Zou; Weiqing Yang; Yuanyuan Zhang; Zicheng Li; Menglin Ma
Journal:  J Fluoresc       Date:  2018-05-02       Impact factor: 2.217

3.  Structure-Activity Relationship of Dialkoxychalcones to Combat Fish Pathogen Saprolegnia australis.

Authors:  Iván Montenegro; Ociel Muñoz; Joan Villena; Enrique Werner; Marco Mellado; Ingrid Ramírez; Nelson Caro; Susana Flores; Alejandro Madrid
Journal:  Molecules       Date:  2018-06-07       Impact factor: 4.411

4.  DFT-based reactivity and combined QSAR, molecular docking of 1,2,4,5-Tetrazine derivatives as inhibitors of Pim-1 kinase.

Authors:  Halima Hazhazi; Nadjib Melkemi; Toufik Salah; Mohammed Bouachrine
Journal:  Heliyon       Date:  2019-09-26
  4 in total

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