Literature DB >> 22148388

A stepwise solvent-promoted SNi reaction of α-D-glucopyranosyl fluoride: mechanistic implications for retaining glycosyltransferases.

Jefferson Chan1, Ariel Tang, Andrew J Bennet.   

Abstract

The solvolysis of α-d-glucopyranosyl fluoride in hexafluoro-2-propanol gives two products, 1,1,1,3,3,3-hexafluoropropan-2-yl α-d-glucopyranoside and 1,6-anhydro-β-D-glucopyranose. The ratio of these two products is essentially unchanged for reactions that are performed between 56 and 100 °C. The activation parameters for the solvolysis reaction are as follows: ΔH(++) = 81.4 ± 1.7 kJ mol(-1), and ΔS(++) = -90.3 ± 4.6 J mol(-1) K(-1). To characterize, by use of multiple kinetic isotope effect (KIE) measurements, the TS for the solvolysis reaction in hexafluoro-2-propanol, we synthesized a series of isotopically labeled α-d-glucopyranosyl fluorides. The measured KIEs for the C1 deuterium, C2 deuterium, C5 deuterium, anomeric carbon, ring oxygen, O6, and solvent deuterium are 1.185 ± 0.006, 1.080 ± 0.010, 0.987 ± 0.007, 1.008 ± 0.007, 0.997 ± 0.006, 1.003 ± 0.007, and 1.68 ± 0.07, respectively. The transition state for the solvolysis reaction was modeled computationally using the experimental KIE values as constraints. Taken together, the reported data are consistent with the retained solvolysis product being formed in an S(N)i (D(N)(++)*A(Nss)) reaction with a late transition state in which cleavage of the glycosidic bond is coupled to the transfer of a proton from a solvating hexafluoro-2-propanol molecule. In comparison, the inverted product, 1,6-anhydro-β-D-glucopyranose, is formed by intramolecular capture of a solvent-equilibrated glucopyranosylium ion, which results from dissociation of the solvent-separated ion pair formed in the rate-limiting ionization reaction (D(N)(++) + A(N)). The implications that this model reaction have for the mode of action of retaining glycosyltransferases are discussed.
© 2011 American Chemical Society

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Year:  2011        PMID: 22148388     DOI: 10.1021/ja209339j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

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Review 3.  Synthesis and Glycosidation of Anomeric Halides: Evolution from Early Studies to Modern Methods of the 21st Century.

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Review 5.  A propos of glycosyl cations and the mechanism of chemical glycosylation; the current state of the art.

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Journal:  Carbohydr Res       Date:  2014-07-01       Impact factor: 2.104

6.  A front-face 'SNi synthase' engineered from a retaining 'double-SN2' hydrolase.

Authors:  Javier Iglesias-Fernández; Susan M Hancock; Seung Seo Lee; Maola Khan; Jo Kirkpatrick; Neil J Oldham; Katherine McAuley; Anthony Fordham-Skelton; Carme Rovira; Benjamin G Davis
Journal:  Nat Chem Biol       Date:  2017-06-12       Impact factor: 15.040

7.  Ab Initio Molecular Dynamics Simulations of the SN1/SN2 Mechanistic Continuum in Glycosylation Reactions.

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Journal:  J Am Chem Soc       Date:  2021-01-13       Impact factor: 15.419

8.  Glycosyl Oxocarbenium Ions: Structure, Conformation, Reactivity, and Interactions.

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9.  Geometric attributes of retaining glycosyltransferase enzymes favor an orthogonal mechanism.

Authors:  Brock Schuman; Stephen V Evans; Thomas M Fyles
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240

Review 10.  Advances in kinetic isotope effect measurement techniques for enzyme mechanism study.

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Journal:  Molecules       Date:  2013-08-02       Impact factor: 4.411

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