Literature DB >> 22142312

Systems medicine and metabolic modelling.

A Mardinoglu1, J Nielsen.   

Abstract

Several complex diseases are caused by the malfunction of human metabolism, and deciphering the underlying molecular mechanisms can elucidate their aetiology. Systems biology is an integrative approach combining experimental and computational biology to identify and describe the molecular mechanisms of complex biological systems. Systems medicine has the potential to elucidate the onset and progression of complex metabolic diseases through the use of computational approaches. Advances in biotechnology have resulted in the provision of high-throughput data, which provide information about different metabolic processes. The systems medicine approach can utilize such data to reconstruct genome-scale metabolic models that can be used to study the function of specific enzymes and pathways in the context of the complete metabolic network. In this review, we outline the importance of genome-scale models in systems medicine and discuss how they may contribute towards the development of personalized medicine.
© 2011 The Association for the Publication of the Journal of Internal Medicine.

Entities:  

Mesh:

Year:  2012        PMID: 22142312     DOI: 10.1111/j.1365-2796.2011.02493.x

Source DB:  PubMed          Journal:  J Intern Med        ISSN: 0954-6820            Impact factor:   8.989


  46 in total

Review 1.  The emerging paradigm of network medicine in the study of human disease.

Authors:  Stephen Y Chan; Joseph Loscalzo
Journal:  Circ Res       Date:  2012-07-20       Impact factor: 17.367

2.  Analyzing LC/MS metabolic profiling data in the context of existing metabolic networks.

Authors:  Tianwei Yu; Yun Bai
Journal:  Curr Metabolomics       Date:  2013-01-01

3.  IDENTIFYING CANCER SPECIFIC METABOLIC SIGNATURES USING CONSTRAINT-BASED MODELS.

Authors:  A Schultz; S Mehta; C W Hu; F W Hoff; T M Horton; S M Kornblau; A A Qutub
Journal:  Pac Symp Biocomput       Date:  2017

4.  A conceptual review on systems biology in health and diseases: from biological networks to modern therapeutics.

Authors:  Pramod Rajaram Somvanshi; K V Venkatesh
Journal:  Syst Synth Biol       Date:  2013-09-18

5.  Live sequence charts to model medical information.

Authors:  Eric Aslakson; Smadar Szekely; Suzanne D Vernon; Lucinda Bateman; Jan Baumbach; Yaki Setty
Journal:  Theor Biol Med Model       Date:  2012-06-15       Impact factor: 2.432

6.  Message Passing and Metabolism.

Authors:  Thomas Parr
Journal:  Entropy (Basel)       Date:  2021-05-14       Impact factor: 2.524

7.  Stratification of patients with clear cell renal cell carcinoma to facilitate drug repositioning.

Authors:  Xiangyu Li; Woonghee Kim; Kajetan Juszczak; Muhammad Arif; Yusuke Sato; Haruki Kume; Seishi Ogawa; Hasan Turkez; Jan Boren; Jens Nielsen; Mathias Uhlen; Cheng Zhang; Adil Mardinoglu
Journal:  iScience       Date:  2021-06-12

8.  Novel insights into obesity and diabetes through genome-scale metabolic modeling.

Authors:  Leif Väremo; Intawat Nookaew; Jens Nielsen
Journal:  Front Physiol       Date:  2013-04-25       Impact factor: 4.566

9.  Integration of clinical data with a genome-scale metabolic model of the human adipocyte.

Authors:  Adil Mardinoglu; Rasmus Agren; Caroline Kampf; Anna Asplund; Intawat Nookaew; Peter Jacobson; Andrew J Walley; Philippe Froguel; Lena M Carlsson; Mathias Uhlen; Jens Nielsen
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

10.  Understanding the interactions between bacteria in the human gut through metabolic modeling.

Authors:  Saeed Shoaie; Fredrik Karlsson; Adil Mardinoglu; Intawat Nookaew; Sergio Bordel; Jens Nielsen
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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