Literature DB >> 22140162

Flavobacterium dankookense sp. nov., isolated from a freshwater reservoir, and emended descriptions of Flavobacterium cheonanense, F. chungnamense, F. koreense and F. aquatile.

Siwon Lee1, Hang-Yeon Weon2, Kyudong Han3, Tae-Young Ahn1.   

Abstract

A novel yellow-pigmented bacterial strain, designated ARSA-19(T), was isolated from a freshwater reservoir in Cheonan, Korea. Cells were Gram-staining-negative, rod-shaped, strictly aerobic and positive for catalase and oxidase. The phylogenetic tree based on 16S rRNA gene sequences showed that strain ARSA-19(T) belonged to the genus Flavobacterium and was related to Flavobacterium macrobrachii an-8(T) (96.5% sequence similarity), F. koreense KACC 14969(T) (96.2%), F. chungnamense KACC 14971(T) (96.1%), F. cheonanense KACC 14972(T) (96.4%) and F. aquatile ATCC 11947(T) (95.6%). The isolate contained MK-6 as the predominant menaquinone and iso-C(15:0) (21.8%), iso-C(16:0) 3-OH (10.4%), iso-C(15:1) G (9.3%), summed feature 3 (iso-C(15:0) 2-OH and/or C(16:1)ω7c; 8.2%), iso-C(15:0) 3-OH (7.7%) and iso-C(16:0) (7.3%) as the major fatty acids. The polar lipids of strain ARSA-19(T) were phosphatidylethanolamine, four unknown aminolipids and two unidentified polar lipids. The DNA G+C content of strain ARSA-19(T) was 33.3 mol%. Based on its phenotypic and genotypic characteristics and on the phylogenetic evidence presented, strain ARSA-19(T) is considered to represent a novel species in the genus Flavobacterium, for which the name Flavobacterium dankookense sp. nov. is proposed. The type strain is ARSA-19(T) ( = KCTC 23179(T)  = JCM 17065(T)  = KACC 14968(T)). Emended descriptions of Flavobacterium cheonanense, Flavobacterium chungnamense, Flavobacterium koreense and Flavobacterium aquatile are also proposed.

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Year:  2011        PMID: 22140162     DOI: 10.1099/ijs.0.032698-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake.

Authors:  Michaela M Salcher; Thomas Posch; Jakob Pernthaler
Journal:  ISME J       Date:  2012-12-13       Impact factor: 10.302

2.  Effects of PCR cycle number and DNA polymerase type on the 16S rRNA gene pyrosequencing analysis of bacterial communities.

Authors:  Jae-Hyung Ahn; Byung-Yong Kim; Jaekyeong Song; Hang-Yeon Weon
Journal:  J Microbiol       Date:  2012-12-30       Impact factor: 3.422

3.  Flavobacterium aquaticum sp. nov., a member of the Bacteroidetes isolated from a freshwater reservoir.

Authors:  Siwon Lee; Jungnam Lee; Tae-Young Ahn
Journal:  J Microbiol       Date:  2013-04-26       Impact factor: 3.422

4.  Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream.

Authors:  Wan-Hoe Kim; Do-Hak Kim; Keunsoo Kang; Tae-Young Ahn
Journal:  J Microbiol       Date:  2016-05-27       Impact factor: 3.422

5.  Phylogeny of flavobacteria group isolated from freshwater using multilocus sequencing analysis.

Authors:  Seyoung Mun; Jungnam Lee; Siwon Lee; Kyudong Han; Tae-Young Ahn
Journal:  Genomics Inform       Date:  2013-12-31
  5 in total

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