Literature DB >> 22139000

Characterization of DC1, a broad-host-range Bcep22-like podovirus.

Karlene H Lynch1, Paul Stothard, Jonathan J Dennis.   

Abstract

Bcep22-like phages are a recently described group of podoviruses that infect strains of Burkholderia cenocepacia. We have isolated and characterized a novel member of this group named DC1. This podovirus shows many genomic similarities to BcepIL02 and Bcep22, but it infects strains belonging to multiple Burkholderia cepacia complex (BCC) species.

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Year:  2011        PMID： 22139000      PMCID： PMC3264122          DOI： 10.1128/AEM.07097-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  25 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  Diagnostically and experimentally useful panel of strains from the Burkholderia cepacia complex.

Authors:  E Mahenthiralingam; T Coenye; J W Chung; D P Speert; J R Govan; P Taylor; P Vandamme
Journal:  J Clin Microbiol       Date:  2000-02       Impact factor: 5.948

3.  Fast algorithms for large-scale genome alignment and comparison.

Authors:  Arthur L Delcher; Adam Phillippy; Jane Carlton; Steven L Salzberg
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

4.  Prediction of lipoprotein signal peptides in Gram-negative bacteria.

Authors:  Agnieszka S Juncker; Hanni Willenbrock; Gunnar Von Heijne; Søren Brunak; Henrik Nielsen; Anders Krogh
Journal:  Protein Sci       Date:  2003-08       Impact factor: 6.725

5.  GeneMark.hmm: new solutions for gene finding.

Authors:  A V Lukashin; M Borodovsky
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

Review 6.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

7.  Biofilm formation and dispersal under the influence of the global regulator CsrA of Escherichia coli.

Authors:  Debra W Jackson; Kazushi Suzuki; Lawrence Oakford; Jerry W Simecka; Mark E Hart; Tony Romeo
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

8.  Reduction in exopolysaccharide viscosity as an aid to bacteriophage penetration through Pseudomonas aeruginosa biofilms.

Authors:  G W Hanlon; S P Denyer; C J Olliff; L J Ibrahim
Journal:  Appl Environ Microbiol       Date:  2001-06       Impact factor: 4.792

9.  Genomes and characterization of phages Bcep22 and BcepIL02, founders of a novel phage type in Burkholderia cenocepacia.

Authors:  Jason J Gill; Elizabeth J Summer; William K Russell; Stephanie M Cologna; Thomas M Carlile; Alicia C Fuller; Kate Kitsopoulos; Leslie M Mebane; Brandi N Parkinson; David Sullivan; Lisa A Carmody; Carlos F Gonzalez; John J LiPuma; Ry Young
Journal:  J Bacteriol       Date:  2011-07-29       Impact factor: 3.490

10.  CoreGenes: a computational tool for identifying and cataloging "core" genes in a set of small genomes.

Authors:  Nikhat Zafar; Raja Mazumder; Donald Seto
Journal:  BMC Bioinformatics       Date:  2002-04-24       Impact factor: 3.169
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  9 in total

1.  Cyanophage A-1(L) Adsorbs to Lipopolysaccharides of Anabaena sp. Strain PCC 7120 via the Tail Protein Lipopolysaccharide-Interacting Protein (ORF36).

Authors:  Zhenzhen Xiong; Yali Wang; Yanling Dong; Qiya Zhang; Xudong Xu
Journal:  J Bacteriol       Date:  2019-01-11       Impact factor: 3.490

2.  Aerosol phage therapy efficacy in Burkholderia cepacia complex respiratory infections.

Authors:  Diana D Semler; Amanda D Goudie; Warren H Finlay; Jonathan J Dennis
Journal:  Antimicrob Agents Chemother       Date:  2014-05-05       Impact factor: 5.191

3.  The Isolation and Characterization of a Broad Host Range Bcep22-like Podovirus JC1.

Authors:  Carly M Davis; Marta K Ruest; Jamie H Cole; Jonathan J Dennis
Journal:  Viruses       Date:  2022-04-29       Impact factor: 5.818

4.  Comparative analysis of two phenotypically-similar but genomically-distinct Burkholderia cenocepacia-specific bacteriophages.

Authors:  Karlene H Lynch; Paul Stothard; Jonathan J Dennis
Journal:  BMC Genomics       Date:  2012-06-07       Impact factor: 3.969

5.  Prevalence, Host Range, and Comparative Genomic Analysis of Temperate Ochrobactrum Phages.

Authors:  Claudia Jäckel; Stefan Hertwig; Holger C Scholz; Karsten Nöckler; Jochen Reetz; Jens A Hammerl
Journal:  Front Microbiol       Date:  2017-06-30       Impact factor: 5.640

Review 6.  The promise of bacteriophage therapy for Burkholderia cepacia complex respiratory infections.

Authors:  Diana D Semler; Karlene H Lynch; Jonathan J Dennis
Journal:  Front Cell Infect Microbiol       Date:  2012-01-20       Impact factor: 5.293

7.  Genomic characterization of JG068, a novel virulent podovirus active against Burkholderia cenocepacia.

Authors:  Karlene H Lynch; Ashraf H Abdu; Max Schobert; Jonathan J Dennis
Journal:  BMC Genomics       Date:  2013-08-27       Impact factor: 3.969

8.  Extensive gene remodeling in the viral world: new evidence for nongradual evolution in the mobilome network.

Authors:  Pierre-Alain Jachiet; Philippe Colson; Philippe Lopez; Eric Bapteste
Journal:  Genome Biol Evol       Date:  2014-08-07       Impact factor: 3.416

9.  Impacts of Antibiotic and Bacteriophage Treatments on the Gut-Symbiont-Associated Blissus insularis (Hemiptera: Blissidae).

Authors:  Yao Xu; Eileen A Buss; Drion G Boucias
Journal:  Insects       Date:  2016-11-03       Impact factor: 2.769
  9 in total

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