Literature DB >> 22134358

Potential drug targets on insomnia and intervention effects of Jujuboside A through metabolic pathway analysis as revealed by UPLC/ESI-SYNAPT-HDMS coupled with pattern recognition approach.

Xijun Wang1, Bo Yang, Aihua Zhang, Hui Sun, Guangli Yan.   

Abstract

Potential metabolites from the metabolic pathways could be therapeutic targets and useful for the discovery of broad spectrum drugs. UPLC/ESI-SYNAPT-HDMS coupled with pattern recognition methods including PCA, PLS-DA, OPLS-DA and Heatmap were integrated to examine the global metabolic signature of insomnia and intervention effects of Jujuboside A (JuA). Six unique pathways of the insomnia were identified using Ingenuity Pathway Analysis (IPA) software. The VIP-value threshold cutoff of the metabolites was set to 10, above this threshold, were filtered out as potential target biomarkers. Sixteen distinct metabolites were identified from these pathways, and 6 of them can be considered for rational drug design. It was further experimental validation that the changes in metabolic profiling were restored to their baseline values after JuA treatment according to the multivariate data analysis. Potential metabolite network of the insomnia was preliminarily predicted JuA-target interaction networks, and could be further explored for in silico docking studies with suitable drugs. Thus, our method is an efficient procedure for drug target identification through metabolic analysis. It can guide testable predictions, provide insights into drug action mechanisms and enable us to increase research productivity toward metabolomic drug discovery.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 22134358     DOI: 10.1016/j.jprot.2011.11.011

Source DB:  PubMed          Journal:  J Proteomics        ISSN: 1874-3919            Impact factor:   4.044


  28 in total

1.  Metabolomics study of type 2 diabetes using ultra-performance LC-ESI/quadrupole-TOF high-definition MS coupled with pattern recognition methods.

Authors:  Ai-hua Zhang; Hui Sun; Guang-li Yan; Ye Yuan; Ying Han; Xi-jun Wang
Journal:  J Physiol Biochem       Date:  2013-08-24       Impact factor: 4.158

2.  Berberine ameliorates nonbacterial prostatitis via multi-target metabolic network regulation.

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3.  Metabolomics of papillary thyroid carcinoma tissues: potential biomarkers for diagnosis and promising targets for therapy.

Authors:  Xingchen Shang; Xia Zhong; Xingsong Tian
Journal:  Tumour Biol       Date:  2016-03-02

4.  Metabolomic analysis of key regulatory metabolites in hepatitis C virus-infected tree shrews.

Authors:  Hui Sun; Aihua Zhang; Guangli Yan; Chengyu Piao; Weiyun Li; Chang Sun; Xiuhong Wu; Xinghua Li; Yun Chen; Xijun Wang
Journal:  Mol Cell Proteomics       Date:  2012-12-20       Impact factor: 5.911

5.  Consolidation of network and experimental pharmacology to divulge the antidiabetic action of Ficus benghalensis L. bark.

Authors:  Pukar Khanal; B M Patil
Journal:  3 Biotech       Date:  2021-04-25       Impact factor: 2.406

6.  Predicting new molecular targets for rhein using network pharmacology.

Authors:  Aihua Zhang; Hui Sun; Bo Yang; Xijun Wang
Journal:  BMC Syst Biol       Date:  2012-03-21

7.  Increasing proline and myo-inositol improves tolerance of Saccharomyces cerevisiae to the mixture of multiple lignocellulose-derived inhibitors.

Authors:  Xin Wang; Xue Bai; Dong-Fang Chen; Fu-Zan Chen; Bing-Zhi Li; Ying-Jin Yuan
Journal:  Biotechnol Biofuels       Date:  2015-09-15       Impact factor: 6.040

8.  Comparative Metabolomic Analysis of the Neuroprotective Effects of Scutellarin and Scutellarein against Ischemic Insult.

Authors:  Hao Tang; Yuping Tang; Nian-Guang Li; Hang Lin; Weixia Li; Qianping Shi; Wei Zhang; Pengxuan Zhang; Zexi Dong; Minzhe Shen; Ting Gu; Jin-Ao Duan
Journal:  PLoS One       Date:  2015-07-06       Impact factor: 3.240

9.  Calcium-deficiency assessment and biomarker identification by an integrated urinary metabonomics analysis.

Authors:  Maoqing Wang; Xue Yang; Fan Wang; Ran Li; Hua Ning; Lixin Na; Yifan Huang; Yue Song; Liyan Liu; Hongzhi Pan; Qiuju Zhang; Lijun Fan; Ying Li; Changhao Sun
Journal:  BMC Med       Date:  2013-03-28       Impact factor: 8.775

10.  Urinary metabolic biomarker and pathway study of hepatitis B virus infected patients based on UPLC-MS system.

Authors:  Aihua Zhang; Hui Sun; Ying Han; Guangli Yan; Xijun Wang
Journal:  PLoS One       Date:  2013-05-16       Impact factor: 3.240

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