Literature DB >> 22133901

NMR-based conformational analysis of sphingomyelin in bicelles.

Toshiyuki Yamaguchi1, Takashi Suzuki, Tomokazu Yasuda, Tohru Oishi, Nobuaki Matsumori, Michio Murata.   

Abstract

Sphingomyelin (SM) is a common sphingolipid in mammalian membranes and is known to be substantially involved in cellular events such as the formation of lipid rafts. Despite its biological significance, conformation of SM in a membrane environment remains unclear because the noncrystalline property and anisotropic environment of lipid bilayers hampers the application of X-ray crystallography and NMR measurements. In this study, to elucidate the conformation of SM in membranes, we utilized bicelles as a substitute for a lipid bilayer membrane. First, we demonstrated through (31)P NMR, (2)H NMR, and dynamic light scattering experiments that SM forms both oriented and isotropic bicelles by changing the ratio of SM/dihexanoyl phosphatidylcholine. Then, we determined the conformation of SM in isotropic bicelles on the basis of coupling constants and NOE correlations in (1)H NMR and found that the C2-C6 and amide groups of SM take a relatively rigid conformation in bicelles.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22133901     DOI: 10.1016/j.bmc.2011.11.001

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  9 in total

Review 1.  Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy.

Authors:  Akira Naito; Nobuaki Matsumori; Ayyalusamy Ramamoorthy
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-06-06       Impact factor: 3.770

2.  Detailed comparison of deuterium quadrupole profiles between sphingomyelin and phosphatidylcholine bilayers.

Authors:  Tomokazu Yasuda; Masanao Kinoshita; Michio Murata; Nobuaki Matsumori
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

3.  Bicelles Rich in both Sphingolipids and Cholesterol and Their Use in Studies of Membrane Proteins.

Authors:  James M Hutchison; Kuo-Chih Shih; Holger A Scheidt; Sarah M Fantin; Kristine F Parson; George A Pantelopulos; Haley R Harrington; Kathleen F Mittendorf; Shuo Qian; Richard A Stein; Scott E Collier; Melissa G Chambers; John Katsaras; Markus W Voehler; Brandon T Ruotolo; Daniel Huster; Robert L McFeeters; John E Straub; Mu-Ping Nieh; Charles R Sanders
Journal:  J Am Chem Soc       Date:  2020-07-08       Impact factor: 15.419

4.  Orientation and Order of the Amide Group of Sphingomyelin in Bilayers Determined by Solid-State NMR.

Authors:  Nobuaki Matsumori; Toshiyuki Yamaguchi; Yoshiko Maeta; Michio Murata
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

5.  CHARMM all-atom additive force field for sphingomyelin: elucidation of hydrogen bonding and of positive curvature.

Authors:  Richard M Venable; Alexander J Sodt; Brent Rogaski; Huan Rui; Elizabeth Hatcher; Alexander D MacKerell; Richard W Pastor; Jeffery B Klauda
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

6.  Molecular substructure of the liquid-ordered phase formed by sphingomyelin and cholesterol: sphingomyelin clusters forming nano-subdomains are a characteristic feature.

Authors:  Michio Murata; Nobuaki Matsumori; Masanao Kinoshita; Erwin London
Journal:  Biophys Rev       Date:  2022-06-11

Review 7.  When detergent meets bilayer: birth and coming of age of lipid bicelles.

Authors:  Ulrich H N Dürr; Ronald Soong; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-01-23       Impact factor: 9.795

8.  Impact of bilayer lipid composition on the structure and topology of the transmembrane amyloid precursor C99 protein.

Authors:  Yuanli Song; Kathleen F Mittendorf; Zhenwei Lu; Charles R Sanders
Journal:  J Am Chem Soc       Date:  2014-03-11       Impact factor: 15.419

9.  Combination of Roll Grinding and High-Pressure Homogenization Can Prepare Stable Bicelles for Drug Delivery.

Authors:  Seira Matsuo; Kenjirou Higashi; Kunikazu Moribe; Shin-Ichiro Kimura; Shigeru Itai; Hiromu Kondo; Yasunori Iwao
Journal:  Nanomaterials (Basel)       Date:  2018-12-03       Impact factor: 5.076

  9 in total

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