Literature DB >> 22133021

Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea.

David Kamanda Ngugi1, André Antunes, Andreas Brune, Ulrich Stingl.   

Abstract

The Red Sea is a unique marine ecosystem with contrasting gradients of temperature and salinity along its north-to-south axis. It is an extremely oligotrophic environment that is characterized by perpetual year-round water column stratification, high annual solar irradiation, and negligible riverine and precipitation inputs. In this study, we investigated whether the contemporary environmental conditions shape community assemblages by pyrosequencing 16S rRNA genes of bacteria in surface water samples collected from the northeastern half of this water body. A combined total of 1855 operational taxonomic units (OTUs) were recovered from the 'small-cell' and 'large-cell' fractions. Here, a few major OTUs affiliated with Cyanobacteria and Proteobacteria accounted for ∼93% of all sequences, whereas a tail of 'rare' OTUs represented most of the diversity. OTUs allied to Surface 1a/b SAR11 clades and Prochlorococcus related to the high-light-adapted (HL2) ecotype were the most widespread and predominant sequence types. Interestingly, the frequency of taxa that are typically found in the upper mesopelagic zone was significantly elevated in the northern transects compared with those in the central, presumably as a direct effect of deep convective mixing in the Gulf of Aqaba and water exchange with the northern Red Sea. Although temperature was the best predictor of species richness across all major lineages, both spatial and environmental distances correlated strongly with phylogenetic distances. Our results suggest that the bacterial diversity of the Red Sea is as high as in other tropical seas and provide evidence for fundamental differences in the biogeography of pelagic communities between the northern and central regions.
© 2011 Blackwell Publishing Ltd.

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Year:  2011        PMID: 22133021     DOI: 10.1111/j.1365-294X.2011.05378.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  33 in total

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Authors:  Chih-Ching Chung; Gwo-Ching Gong; Chin-Yi Huang; Jer-Young Lin; Yun-Chi Lin
Journal:  Microb Ecol       Date:  2015-04-09       Impact factor: 4.552

2.  Red Sea SAR11 and Prochlorococcus Single-Cell Genomes Reflect Globally Distributed Pangenomes.

Authors:  Luke R Thompson; Mohamed F Haroon; Ahmed A Shibl; Matt J Cahill; David K Ngugi; Gareth J Williams; James T Morton; Rob Knight; Kelly D Goodwin; Ulrich Stingl
Journal:  Appl Environ Microbiol       Date:  2019-06-17       Impact factor: 4.792

3.  Reconstruction of novel cyanobacterial siphovirus genomes from Mediterranean metagenomic fosmids.

Authors:  Carolina Megumi Mizuno; Francisco Rodriguez-Valera; Inmaculada Garcia-Heredia; Ana-Belen Martin-Cuadrado; Rohit Ghai
Journal:  Appl Environ Microbiol       Date:  2012-11-16       Impact factor: 4.792

4.  Metagenomic covariation along densely sampled environmental gradients in the Red Sea.

Authors:  Luke R Thompson; Gareth J Williams; Mohamed F Haroon; Ahmed Shibl; Peter Larsen; Joshua Shorenstein; Rob Knight; Ulrich Stingl
Journal:  ISME J       Date:  2016-07-15       Impact factor: 10.302

5.  Composition and Predictive Functional Analysis of Bacterial Communities in Seawater, Sediment and Sponges in the Spermonde Archipelago, Indonesia.

Authors:  Daniel F R Cleary; Nicole J de Voogd; Ana R M Polónia; Rossana Freitas; Newton C M Gomes
Journal:  Microb Ecol       Date:  2015-06-14       Impact factor: 4.552

6.  Comprehensive Genomic Analyses of the OM43 Clade, Including a Novel Species from the Red Sea, Indicate Ecotype Differentiation among Marine Methylotrophs.

Authors:  Francy Jimenez-Infante; David Kamanda Ngugi; Manikandan Vinu; Intikhab Alam; Allan Anthony Kamau; Jochen Blom; Vladimir B Bajic; Ulrich Stingl
Journal:  Appl Environ Microbiol       Date:  2015-12-11       Impact factor: 4.792

7.  High-Frequency Variability of Bacterioplankton in Response to Environmental Drivers in Red Sea Coastal Waters.

Authors:  Mohd Ikram Ansari; Maria Li Calleja; Luis Silva; Miguel Viegas; David Kamanda Ngugi; Tamara Megan Huete-Stauffer; Xosé Anxelu G Morán
Journal:  Front Microbiol       Date:  2022-03-31       Impact factor: 5.640

8.  Temperature Responses of Heterotrophic Bacteria in Co-culture With a Red Sea Synechococcus Strain.

Authors:  Abbrar Labban; Antonio S Palacio; Francisca C García; Ghaida Hadaidi; Mohd I Ansari; Ángel López-Urrutia; Laura Alonso-Sáez; Pei-Ying Hong; Xosé Anxelu G Morán
Journal:  Front Microbiol       Date:  2021-05-10       Impact factor: 5.640

9.  Patterns of ecological specialization among microbial populations in the Red Sea and diverse oligotrophic marine environments.

Authors:  Luke R Thompson; Chris Field; Tamara Romanuk; David Ngugi; Rania Siam; Hamza El Dorry; Ulrich Stingl
Journal:  Ecol Evol       Date:  2013-05-11       Impact factor: 2.912

10.  Combined analyses of the ITS loci and the corresponding 16S rRNA genes reveal high micro- and macrodiversity of SAR11 populations in the Red Sea.

Authors:  David Kamanda Ngugi; Ulrich Stingl
Journal:  PLoS One       Date:  2012-11-20       Impact factor: 3.240

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