Literature DB >> 22132811

Rapid determination of perv copy number from porcine genomic DNA by real-time polymerase chain reaction.

Donghee Lee1, Jungeun Lee, Jong-Kwang Yoon, Na Young Kim, Gye-Woong Kim, Chankyu Park, Yu-Kyoung Oh, Young Bong Kim.   

Abstract

Here, we report the quantification of porcine endogenous retrovirus (PERV) copy numbers using real time PCR. After generating standard curves using plasmid DNA, copy numbers were determined for PERV pol and for a housekeeping gene, porcine estrogen receptor2 (ER2) with the same amount of genomic DNA. Using this method, we examined 6 pig breeds in Korea including two breeds of miniature pig, one domestic pig from Jeju, and imported pig breeds, Duroc, Landrace, and Yorkshire. All breeds showed PERV copy numbers ranging from 9 to 50. This method will be useful for monitoring of PERVs in a porcine xenograft.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22132811     DOI: 10.1080/10495398.2011.595294

Source DB:  PubMed          Journal:  Anim Biotechnol        ISSN: 1049-5398            Impact factor:   2.282


  6 in total

1.  Identification of Porcine Endogenous Retrovirus (PERV) packaging sequence and development of PERV packaging viral vector system.

Authors:  Jiwon Choi; Hoon-mi Kim; Jong Kwang Yoon; Yeondong Cho; Hee-Jung Lee; Kang Chang Kim; Chang-Kyu Kim; Gye-Woong Kim; Young Bong Kim
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

Review 2.  Transplant genetics and genomics.

Authors:  Joshua Y C Yang; Minnie M Sarwal
Journal:  Nat Rev Genet       Date:  2017-03-13       Impact factor: 53.242

3.  Scan of the endogenous retrovirus sequences across the swine genome and survey of their copy number variation and sequence diversity among various Chinese and Western pig breeds.

Authors:  Jia-Qi Chen; Ming-Peng Zhang; Xin-Kai Tong; Jing-Quan Li; Zhou Zhang; Fei Huang; Hui-Peng Du; Meng Zhou; Hua-Shui Ai; Lu-Sheng Huang
Journal:  Zool Res       Date:  2022-05-18

4.  A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections.

Authors:  Samuele Bovo; Gianluca Mazzoni; Anisa Ribani; Valerio Joe Utzeri; Francesca Bertolini; Giuseppina Schiavo; Luca Fontanesi
Journal:  PLoS One       Date:  2017-06-29       Impact factor: 3.240

5.  The Relationship between Embryonic Development and the Efficiency of Target Mutations in Porcine Endogenous Retroviruses (PERVs) Pol Genes in Porcine Embryos.

Authors:  Maki Hirata; Manita Wittayarat; Takayuki Hirano; Nhien Thi Nguyen; Quynh Anh Le; Zhao Namula; Mokhamad Fahrudin; Fuminori Tanihara; Takeshige Otoi
Journal:  Animals (Basel)       Date:  2019-08-22       Impact factor: 2.752

Review 6.  How Active Are Porcine Endogenous Retroviruses (PERVs)?

Authors:  Joachim Denner
Journal:  Viruses       Date:  2016-08-03       Impact factor: 5.048

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.