Literature DB >> 22131394

A single-base substitution in the seed region of miR-184 causes EDICT syndrome.

Benjamin W Iliff1, S Amer Riazuddin, John D Gottsch.   

Abstract

PURPOSE: To investigate the cause of the syndrome characterized by endothelial dystrophy, iris hypoplasia, congenital cataract, and stromal thinning (EDICT).
METHODS: Previously a multigenerational family was reported that comprised 10 individuals affected by syndromal anterior segment dysgenesis. Blood samples were re-collected from eight affected and two unaffected individuals, and genomic DNA was extracted. A total of 24 candidate genes and 4 microRNAs residing within the critical interval were sequenced bidirectionally. In silico analyses were performed to examine the effect of the causal variant on the stability of the pre-microRNA structure.
RESULTS: Bidirectional sequencing identified the single-base substitution +57C>T in miR-184. This variation segregated with the disease phenotype and was absent in the 1000 Genomes project, 1130 control chromosomes, and 28 nonhuman vertebrates.
CONCLUSIONS: The single-base-pair substitution in the seed region of miR-184 is responsible for the disease phenotype observed in EDICT syndrome.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22131394      PMCID: PMC3292370          DOI: 10.1167/iovs.11-8783

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  43 in total

1.  Asymmetry in the assembly of the RNAi enzyme complex.

Authors:  Dianne S Schwarz; György Hutvágner; Tingting Du; Zuoshang Xu; Neil Aronin; Phillip D Zamore
Journal:  Cell       Date:  2003-10-17       Impact factor: 41.582

2.  Functional siRNAs and miRNAs exhibit strand bias.

Authors:  Anastasia Khvorova; Angela Reynolds; Sumedha D Jayasena
Journal:  Cell       Date:  2003-10-17       Impact factor: 41.582

3.  Familial keratoconus with cataract: linkage to the long arm of chromosome 15 and exclusion of candidate genes.

Authors:  Anne E Hughes; Durga P Dash; A Jonathan Jackson; David G Frazer; Giuliana Silvestri
Journal:  Invest Ophthalmol Vis Sci       Date:  2003-12       Impact factor: 4.799

4.  Serial analysis of gene expression in the corneal endothelium of Fuchs' dystrophy.

Authors:  John D Gottsch; Amanda L Bowers; Elliott H Margulies; Gerami D Seitzman; Sean W Kim; Saurabh Saha; Albert S Jun; Walter J Stark; Sammy H Liu
Journal:  Invest Ophthalmol Vis Sci       Date:  2003-02       Impact factor: 4.799

Review 5.  MicroRNAs: small RNAs with a big role in gene regulation.

Authors:  Lin He; Gregory J Hannon
Journal:  Nat Rev Genet       Date:  2004-07       Impact factor: 53.242

6.  Structural features of microRNA (miRNA) precursors and their relevance to miRNA biogenesis and small interfering RNA/short hairpin RNA design.

Authors:  Jacek Krol; Krzysztof Sobczak; Urszula Wilczynska; Maria Drath; Anna Jasinska; Danuta Kaczynska; Wlodzimierz J Krzyzosiak
Journal:  J Biol Chem       Date:  2004-08-02       Impact factor: 5.157

7.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

8.  Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs.

Authors:  Lee P Lim; Nelson C Lau; Philip Garrett-Engele; Andrew Grimson; Janell M Schelter; John Castle; David P Bartel; Peter S Linsley; Jason M Johnson
Journal:  Nature       Date:  2005-01-30       Impact factor: 49.962

9.  Clinical and ultrastructural features of a novel hereditary anterior segment dysgenesis.

Authors:  E K Akpek; Albert S Jun; Daniel F Goodman; W Richard Green; John D Gottsch
Journal:  Ophthalmology       Date:  2002-03       Impact factor: 12.079

10.  Endothelial dystrophy, iris hypoplasia, congenital cataract, and stromal thinning (edict) syndrome maps to chromosome 15q22.1-q25.3.

Authors:  Albert S Jun; Karl W Broman; Diana V Do; Esen K Akpek; Walter J Stark; John D Gottsch
Journal:  Am J Ophthalmol       Date:  2002-08       Impact factor: 5.258

View more
  37 in total

1.  Knowledge-based analysis of functional impacts of mutations in microRNA seed regions.

Authors:  Anindya Bhattacharya; Yan Cui
Journal:  J Biosci       Date:  2015-10       Impact factor: 1.826

2.  microRNAs and inherited retinal dystrophies.

Authors:  Shunbin Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-09       Impact factor: 11.205

3.  Documenting the corneal phenotype associated with the MIR184 c.57C>T mutation.

Authors:  Benjamin W Iliff; S Amer Riazuddin; John D Gottsch
Journal:  Am J Hum Genet       Date:  2012-05-04       Impact factor: 11.025

Review 4.  Inherited Congenital Cataract: A Guide to Suspect the Genetic Etiology in the Cataract Genesis.

Authors:  Olga Messina-Baas; Sergio A Cuevas-Covarrubias
Journal:  Mol Syndromol       Date:  2017-02-07

5.  Endothelial cell microRNA expression in human late-onset Fuchs' dystrophy.

Authors:  Mario Matthaei; Jianfei Hu; Laura Kallay; Charles G Eberhart; Claus Cursiefen; Jiang Qian; Eva-Maria Lackner; Albert S Jun
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-01-09       Impact factor: 4.799

6.  Independent origin of c.57 C > T mutation in MIR184 associated with inherited corneal and lens abnormalities.

Authors:  Yelena Bykhovskaya; Michael F Seldin; Yutao Liu; Michael Ransom; Xiaohui Li; Yaron S Rabinowitz
Journal:  Ophthalmic Genet       Date:  2014-11-06       Impact factor: 1.803

7.  MicroRNA-184 modulates canonical Wnt signaling through the regulation of frizzled-7 expression in the retina with ischemia-induced neovascularization.

Authors:  Yusuke Takahashi; Qian Chen; Raju V S Rajala; Jian-Xing Ma
Journal:  FEBS Lett       Date:  2015-03-18       Impact factor: 4.124

8.  Expression analysis of miR-221-3p and its target genes in horses.

Authors:  So-Won Kim; Ara Jo; Jennifer Im; Hee-Eun Lee; Heui-Soo Kim
Journal:  Genes Genomics       Date:  2019-01-02       Impact factor: 1.839

9.  The genetics of Fuchs' corneal dystrophy.

Authors:  Benjamin W Iliff; S Amer Riazuddin; John D Gottsch
Journal:  Expert Rev Ophthalmol       Date:  2012-08

10.  Transcriptome Profiling of Developing Murine Lens Through RNA Sequencing.

Authors:  Shahid Y Khan; Sean F Hackett; Mei-Chong W Lee; Nader Pourmand; C Conover Talbot; S Amer Riazuddin
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-07       Impact factor: 4.799

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.