Literature DB >> 22130576

COI barcoding of Nebelid testate amoebae (Amoebozoa: Arcellinida): extensive cryptic diversity and redefinition of the Hyalospheniidae Schultze.

Anush Kosakyan1, Thierry J Heger, Brian S Leander, Milcho Todorov, Edward A D Mitchell, Enrique Lara.   

Abstract

We used Cytochrome Oxidase Subunit 1 (COI) to assess the phylogenetic relationships and taxonomy of Nebela sensu stricto and similar taxa (Nebela group, Arcellinida) in order to clarify the taxonomic validity of morphological characters. The COI data not only successfully separated all studied morphospecies but also revealed the existence of several potential cryptic species. The taxonomic implications of the results are: (1) Genus Nebela is paraphyletic and will need to be split into at least two monophyletic assemblages when taxon sampling is further expanded. (2) Genus Quadrulella, one of the few arcellinid genera building its shell from self-secreted siliceous elements, and the mixotrophic Hyalosphenia papilio branch within the Nebela group in agreement with the general morphology of their shell and the presence of an organic rim around the aperture (synapomorphy for Hyalospheniidae). We thus synonymise Hyalospheniidae and Nebelidae. Hyalospheniidae takes precedence and now includes Hyalosphenia, Quadrulella (previously in the Lesquereusiidae) and all Nebelidae with the exception of Argynnia and Physochila. Leptochlamys is Arcellinida incertae sedis. We describe a new genus Padaungiella Lara et Todorov and a new species Nebela meisterfeldi n. sp. Heger et Mitchell and revise the taxonomic position (and rank) of several taxa. These results show that the traditional morphology-based taxonomy underestimates the diversity within the Nebela group, and that phylogenetic relationships are best inferred from shell shape rather than from the material used to build the shell.
Copyright © 2011 Elsevier GmbH. All rights reserved.

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Year:  2011        PMID: 22130576     DOI: 10.1016/j.protis.2011.10.003

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  8 in total

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Authors:  Daniel J G Lahr; Haywood Dail Laughinghouse; Angela M Oliverio; Feng Gao; Laura A Katz
Journal:  Bioessays       Date:  2014-08-25       Impact factor: 4.345

2.  Old lineages in a new ecosystem: diversification of arcellinid amoebae (Amoebozoa) and peatland mosses.

Authors:  Omar Fiz-Palacios; Brian S Leander; Thierry J Heger
Journal:  PLoS One       Date:  2014-04-24       Impact factor: 3.240

3.  Are microbes fundamentally different than macroorganisms? Convergence and a possible case for neutral phenotypic evolution in testate amoeba (Amoebozoa: Arcellinida).

Authors:  Angela M Oliverio; Daniel J G Lahr; Jessica Grant; Laura A Katz
Journal:  R Soc Open Sci       Date:  2015-12-16       Impact factor: 2.963

4.  A practical implementation of large transcriptomic data analysis to resolve cryptic species diversity problems in microbial eukaryotes.

Authors:  Yonas I Tekle; Fiona C Wood
Journal:  BMC Evol Biol       Date:  2018-11-16       Impact factor: 3.260

5.  CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms.

Authors:  Jan Pawlowski; Stéphane Audic; Sina Adl; David Bass; Lassaâd Belbahri; Cédric Berney; Samuel S Bowser; Ivan Cepicka; Johan Decelle; Micah Dunthorn; Anna Maria Fiore-Donno; Gillian H Gile; Maria Holzmann; Regine Jahn; Miloslav Jirků; Patrick J Keeling; Martin Kostka; Alexander Kudryavtsev; Enrique Lara; Julius Lukeš; David G Mann; Edward A D Mitchell; Frank Nitsche; Maria Romeralo; Gary W Saunders; Alastair G B Simpson; Alexey V Smirnov; John L Spouge; Rowena F Stern; Thorsten Stoeck; Jonas Zimmermann; David Schindel; Colomban de Vargas
Journal:  PLoS Biol       Date:  2012-11-06       Impact factor: 8.029

6.  The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems.

Authors:  Daniel J G Lahr; Tanja Bosak; Enrique Lara; Edward A D Mitchell
Journal:  PeerJ       Date:  2015-09-08       Impact factor: 2.984

7.  Checklist of Sphagnum-dwelling testate amoebae in Bulgaria.

Authors:  Nikola Bankov; Milcho Todorov; Anna Ganeva
Journal:  Biodivers Data J       Date:  2018-05-22

8.  Superficially described and ignored for 92 years, rediscovered and emended: Apodera angatakere (Amoebozoa: Arcellinida: Hyalospheniformes) is a new flagship testate amoeba taxon from Aotearoa (New Zealand).

Authors:  Clément Duckert; Quentin Blandenier; Michelle McKeown; Holden Hohaia; Stefan Luketa; Janet Wilmshurst; Enrique Lara; Edward A D Mitchell
Journal:  J Eukaryot Microbiol       Date:  2021-09-04       Impact factor: 3.880

  8 in total

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