Literature DB >> 22129199

Analysis of the biological activity of a novel 24-membered macrolide JBIR-19 in Saccharomyces cerevisiae by the morphological imaging program CalMorph.

Shinsuke Ohnuki1, Tomohide Kobayashi, Hayato Ogawa, Ikuko Kozone, Jun-Ya Ueda, Motoki Takagi, Kazuo Shin-Ya, Dai Hirata, Satoru Nogami, Yoshikazu Ohya.   

Abstract

To investigate the biological activity of a novel 24-membered macrolide compound, JBIR-19, isolated from the culture broth of the entomopathogenic fungus Metarhizium sp. fE61, morphological changes in yeast cells were examined using the automated image-processing program CalMorph. Principal components analysis was used to elucidate dynamic changes in the phenotypes, revealing two independent effects of JBIR-19 in yeast cells: bud elongation and increased size of the actin region. Using a fitness assay, we identified the genes required for robust growth in the presence of JBIR-19. Among these were CCW12, YLR111W, and DHH1, which are also involved in abnormal bud morphology. Based on these results and others, we predict intracellular targets of JBIR-19 and its functional interactions.
© 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

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Year:  2012        PMID: 22129199     DOI: 10.1111/j.1567-1364.2011.00770.x

Source DB:  PubMed          Journal:  FEMS Yeast Res        ISSN: 1567-1356            Impact factor:   2.796


  11 in total

1.  From Yeast to Humans: Leveraging New Approaches in Yeast to Accelerate Discovery of Therapeutic Targets for Synucleinopathies.

Authors:  Jeff S Piotrowski; Daniel F Tardiff
Journal:  Methods Mol Biol       Date:  2019

2.  Plant-derived antifungal agent poacic acid targets β-1,3-glucan.

Authors:  Jeff S Piotrowski; Hiroki Okada; Fachuang Lu; Sheena C Li; Li Hinchman; Ashish Ranjan; Damon L Smith; Alan J Higbee; Arne Ulbrich; Joshua J Coon; Raamesh Deshpande; Yury V Bukhman; Sean McIlwain; Irene M Ong; Chad L Myers; Charles Boone; Robert Landick; John Ralph; Mehdi Kabbage; Yoshikazu Ohya
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-09       Impact factor: 11.205

3.  Profilin is required for Ca2+ homeostasis and Ca2+-modulated bud formation in yeast.

Authors:  Mitsunori Yoshida; Shinsuke Ohnuki; Yoko Yashiroda; Yoshikazu Ohya
Journal:  Mol Genet Genomics       Date:  2013-05-26       Impact factor: 3.291

4.  Genetic profiling of protein burden and nuclear export overload.

Authors:  Reiko Kintaka; Koji Makanae; Shotaro Namba; Hisaaki Kato; Keiji Kito; Shinsuke Ohnuki; Yoshikazu Ohya; Brenda J Andrews; Charles Boone; Hisao Moriya
Journal:  Elife       Date:  2020-11-04       Impact factor: 8.140

5.  Distinct roles of cell wall biogenesis in yeast morphogenesis as revealed by multivariate analysis of high-dimensional morphometric data.

Authors:  Hiroki Okada; Shinsuke Ohnuki; Cesar Roncero; James B Konopka; Yoshikazu Ohya
Journal:  Mol Biol Cell       Date:  2013-11-20       Impact factor: 4.138

6.  Unveiling nonessential gene deletions that confer significant morphological phenotypes beyond natural yeast strains.

Authors:  Ming Yang; Shinsuke Ohnuki; Yoshikazu Ohya
Journal:  BMC Genomics       Date:  2014-10-25       Impact factor: 3.969

7.  Phenotypic Diagnosis of Lineage and Differentiation During Sake Yeast Breeding.

Authors:  Shinsuke Ohnuki; Hiroki Okada; Anne Friedrich; Yoichiro Kanno; Tetsuya Goshima; Hirokazu Hasuda; Masaaki Inahashi; Naoto Okazaki; Hiroyasu Tamura; Ryo Nakamura; Dai Hirata; Hisashi Fukuda; Hitoshi Shimoi; Katsuhiko Kitamoto; Daisuke Watanabe; Joseph Schacherer; Takeshi Akao; Yoshikazu Ohya
Journal:  G3 (Bethesda)       Date:  2017-08-07       Impact factor: 3.154

8.  High-throughput platform for yeast morphological profiling predicts the targets of bioactive compounds.

Authors:  Shinsuke Ohnuki; Itsuki Ogawa; Kaori Itto-Nakama; Fachuang Lu; Ashish Ranjan; Mehdi Kabbage; Abraham Abera Gebre; Masao Yamashita; Sheena C Li; Yoko Yashiroda; Satoshi Yoshida; Takeo Usui; Jeff S Piotrowski; Brenda J Andrews; Charles Boone; Grant W Brown; John Ralph; Yoshikazu Ohya
Journal:  NPJ Syst Biol Appl       Date:  2022-01-27

9.  Vanillin inhibits translation and induces messenger ribonucleoprotein (mRNP) granule formation in saccharomyces cerevisiae: application and validation of high-content, image-based profiling.

Authors:  Aya Iwaki; Shinsuke Ohnuki; Yohei Suga; Shingo Izawa; Yoshikazu Ohya
Journal:  PLoS One       Date:  2013-04-24       Impact factor: 3.240

10.  Systematic analysis of Ca2+ homeostasis in Saccharomyces cerevisiae based on chemical-genetic interaction profiles.

Authors:  Farzan Ghanegolmohammadi; Mitsunori Yoshida; Shinsuke Ohnuki; Yuko Sukegawa; Hiroki Okada; Keisuke Obara; Akio Kihara; Kuninori Suzuki; Tetsuya Kojima; Nozomu Yachie; Dai Hirata; Yoshikazu Ohya
Journal:  Mol Biol Cell       Date:  2017-05-31       Impact factor: 4.138

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