Literature DB >> 22127438

Turing instabilities in a mathematical model for signaling networks.

Andreas Rätz1, Matthias Röger.   

Abstract

GTPase molecules are important regulators in cells that continuously run through an activation/deactivation and membrane-attachment/membrane-detachment cycle. Activated GTPase is able to localize in parts of the membranes and to induce cell polarity. As feedback loops contribute to the GTPase cycle and as the coupling between membrane-bound and cytoplasmic processes introduces different diffusion coefficients a Turing mechanism is a natural candidate for this symmetry breaking. We formulate a mathematical model that couples a reaction-diffusion system in the inner volume to a reaction-diffusion system on the membrane via a flux condition and an attachment/detachment law at the membrane. We present a reduction to a simpler non-local reaction-diffusion model and perform a stability analysis and numerical simulations for this reduction. Our model in principle does support Turing instabilities but only if the lateral diffusion of inactivated GTPase is much faster than the diffusion of activated GTPase.

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Year:  2011        PMID: 22127438     DOI: 10.1007/s00285-011-0495-4

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  21 in total

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3.  Single-molecule diffusion measurements of H-Ras at the plasma membrane of live cells reveal microdomain localization upon activation.

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4.  Alternative mechanisms of structuring biomembranes: self-assembly versus self-organization.

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7.  Wave-pinning and cell polarity from a bistable reaction-diffusion system.

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  9 in total

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4.  Spherical Caps in Cell Polarization.

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5.  Simple Rho GTPase Dynamics Generate a Complex Regulatory Landscape Associated with Cell Shape.

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Journal:  Biophys J       Date:  2020-02-04       Impact factor: 4.033

6.  Stability analysis and simulations of coupled bulk-surface reaction-diffusion systems.

Authors:  Anotida Madzvamuse; Andy H W Chung; Chandrasekhar Venkataraman
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7.  Long time behavior and stable patterns in high-dimensional polarity models of asymmetric cell division.

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8.  A computational method for the coupled solution of reaction-diffusion equations on evolving domains and manifolds: Application to a model of cell migration and chemotaxis.

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9.  Spatial modeling of the membrane-cytosolic interface in protein kinase signal transduction.

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Journal:  PLoS Comput Biol       Date:  2018-04-09       Impact factor: 4.475

  9 in total

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