Literature DB >> 22126239

The hunt for 5-hydroxymethylcytosine: the sixth base.

Chun-Xiao Song, Chuan He.   

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Year:  2011        PMID： 22126239      PMCID： PMC3708547          DOI： 10.2217/epi.11.74

Source DB:  PubMed          Journal:  Epigenomics        ISSN： 1750-192X            Impact factor:   4.778


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  21 in total

1.  TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity.

Authors:  Kristine Williams; Jesper Christensen; Marianne Terndrup Pedersen; Jens V Johansen; Paul A C Cloos; Juri Rappsilber; Kristian Helin
Journal:  Nature       Date:  2011-04-13       Impact factor: 49.962

2.  Enzymatic labeling of 5-hydroxymethylcytosine in DNA.

Authors:  Claudia Höbartner
Journal:  Angew Chem Int Ed Engl       Date:  2011-04-11       Impact factor: 15.336

3.  Detection of 5-hydroxymethylcytosine in DNA by transferring a keto-glucose by using T4 phage β-glucosyltransferase.

Authors:  Chun-Xiao Song; Yao Sun; Qing Dai; Xing-Yu Lu; Miao Yu; Cai-Guang Yang; Chuan He
Journal:  Chembiochem       Date:  2011-06-07       Impact factor: 3.164

4.  Methyltransferase-directed derivatization of 5-hydroxymethylcytosine in DNA.

Authors:  Zita Liutkevičiūtė; Edita Kriukienė; Indrė Grigaitytė; Viktoras Masevičius; Saulius Klimašauskas
Journal:  Angew Chem Int Ed Engl       Date:  2011-01-26       Impact factor: 15.336

Review 5.  5-Hydroxymethylcytosine, the sixth base of the genome.

Authors:  Martin Münzel; Daniel Globisch; Thomas Carell
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-17       Impact factor: 15.336

6.  Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells.

Authors:  William A Pastor; Utz J Pape; Yun Huang; Hope R Henderson; Ryan Lister; Myunggon Ko; Erin M McLoughlin; Yevgeny Brudno; Sahasransu Mahapatra; Philipp Kapranov; Mamta Tahiliani; George Q Daley; X Shirley Liu; Joseph R Ecker; Patrice M Milos; Suneet Agarwal; Anjana Rao
Journal:  Nature       Date:  2011-05-08       Impact factor: 49.962

7.  Discrimination of methylcytosine from hydroxymethylcytosine in DNA molecules.

Authors:  Meni Wanunu; Devora Cohen-Karni; Robert R Johnson; Lauren Fields; Jack Benner; Neil Peterman; Yu Zheng; Michael L Klein; Marija Drndic
Journal:  J Am Chem Soc       Date:  2010-12-14       Impact factor: 15.419

8.  Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation.

Authors:  Gabriella Ficz; Miguel R Branco; Stefanie Seisenberger; Fátima Santos; Felix Krueger; Timothy A Hore; C Joana Marques; Simon Andrews; Wolf Reik
Journal:  Nature       Date:  2011-04-03       Impact factor: 49.962

9.  A novel method for the efficient and selective identification of 5-hydroxymethylcytosine in genomic DNA.

Authors:  Adam B Robertson; John A Dahl; Cathrine B Vågbø; Pankaj Tripathi; Hans E Krokan; Arne Klungland
Journal:  Nucleic Acids Res       Date:  2011-02-07       Impact factor: 16.971

10.  Genomic mapping of 5-hydroxymethylcytosine in the human brain.

Authors:  Seung-Gi Jin; Xiwei Wu; Arthur X Li; Gerd P Pfeifer
Journal:  Nucleic Acids Res       Date:  2011-03-04       Impact factor: 16.971
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  11 in total

1.  Genome-wide mapping of 5-hydroxymethylcytosine in three rice cultivars reveals its preferential localization in transcriptionally silent transposable element genes.

Authors:  Xi-liang Wang; Shu-hui Song; Yong-Sheng Wu; Yu-Li Li; Ting-ting Chen; Zhi-yuan Huang; Shuo Liu; Thomas L Dunwell; Gerd P Pfeifer; Jim M Dunwell; Raheema Wamaedeesa; Ihsan Ullah; Yinsheng Wang; Song-nian Hu
Journal:  J Exp Bot       Date:  2015-08-13       Impact factor: 6.992

Review 2.  Suicide and the polyamine system.

Authors:  Jeffrey A Gross; Gustavo Turecki
Journal:  CNS Neurol Disord Drug Targets       Date:  2013-11       Impact factor: 4.388

Review 3.  Epigenetic pathways through which experiences become linked with biology.

Authors:  Patrick O McGowan; Tania L Roth
Journal:  Dev Psychopathol       Date:  2015-05

4.  Immunohistochemical Detection of 5-Methylcytosine and 5-Hydroxymethylcytosine in Developing and Postmitotic Mouse Retina.

Authors:  Ratnesh K Singh; Pablo E Diaz; François Binette; Igor O Nasonkin
Journal:  J Vis Exp       Date:  2018-08-29       Impact factor: 1.355

Review 5.  DNA methylation methods: Global DNA methylation and methylomic analyses.

Authors:  Shizhao Li; Trygve O Tollefsbol
Journal:  Methods       Date:  2020-10-09       Impact factor: 3.608

6.  Huntington's disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels.

Authors:  Steve Horvath; Peter Langfelder; Seung Kwak; Jeff Aaronson; Jim Rosinski; Thomas F Vogt; Marika Eszes; Richard L M Faull; Maurice A Curtis; Henry J Waldvogel; Oi-Wa Choi; Spencer Tung; Harry V Vinters; Giovanni Coppola; X William Yang
Journal:  Aging (Albany NY)       Date:  2016-07       Impact factor: 5.682

7.  Evidence for novel epigenetic marks within plants.

Authors:  Asaad M Mahmood; Jim M Dunwell
Journal:  AIMS Genet       Date:  2019-12-24

Review 8.  Modern epigenetics methods in biological research.

Authors:  Yuanyuan Li
Journal:  Methods       Date:  2020-07-06       Impact factor: 3.608

Review 9.  Mapping recently identified nucleotide variants in the genome and transcriptome.

Authors:  Chun-Xiao Song; Chengqi Yi; Chuan He
Journal:  Nat Biotechnol       Date:  2012-11       Impact factor: 54.908

10.  DNA methylation characteristics of primary melanomas with distinct biological behaviour.

Authors:  Szilvia Ecsedi; Hector Hernandez-Vargas; Sheila C Lima; Laura Vizkeleti; Reka Toth; Viktoria Lazar; Viktoria Koroknai; Timea Kiss; Gabriella Emri; Zdenko Herceg; Roza Adany; Margit Balazs
Journal:  PLoS One       Date:  2014-05-15       Impact factor: 3.240
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