Literature DB >> 22126094

Dissecting the kinetic process of amyloid fiber formation through asymptotic analysis.

Liu Hong1, Xianghong Qi, Yang Zhang.   

Abstract

Amyloids are insoluble fibrous protein aggregates which, when abnormally accumulated in the body, can result in amyloidosis and various neurodegenerative diseases. In this work, we describe a new approach to the asymptotic solution of the master equation of amyloid fiber aggregations. It is found that four distinct and successive stages (lag phase, exponential growth phase, breaking phase, and static phase) dominate the fiber formation process. On the basis of the distinctive power-law dependence of the half-time and apparent growth rate of the fiber formation on the initial protein concentration, we propose a novel classification for amyloid proteins theoretically.

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Year:  2011        PMID: 22126094      PMCID: PMC3314729          DOI: 10.1021/jp205702u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  47 in total

1.  Silent prions lying in wait: a two-hit model of prion/amyloid formation and infection.

Authors:  Damien Hall; Herman Edskes
Journal:  J Mol Biol       Date:  2004-02-20       Impact factor: 5.469

2.  The importance of sequence diversity in the aggregation and evolution of proteins.

Authors:  Caroline F Wright; Sarah A Teichmann; Jane Clarke; Christopher M Dobson
Journal:  Nature       Date:  2005-12-08       Impact factor: 49.962

3.  Shear flow induces amyloid fibril formation.

Authors:  Elisabeth K Hill; Benjamin Krebs; Dianna G Goodall; Geoffrey J Howlett; Dave E Dunstan
Journal:  Biomacromolecules       Date:  2006-01       Impact factor: 6.988

4.  The kinetic behavior of insulin fibrillation is determined by heterogeneous nucleation pathways.

Authors:  Fabio Librizzi; Christian Rischel
Journal:  Protein Sci       Date:  2005-12       Impact factor: 6.725

Review 5.  From the globular to the fibrous state: protein structure and structural conversion in amyloid formation.

Authors:  M Sunde; C C Blake
Journal:  Q Rev Biophys       Date:  1998-02       Impact factor: 5.318

6.  Kinetic theory of fibrillogenesis of amyloid beta-protein.

Authors:  A Lomakin; D B Teplow; D A Kirschner; G B Benedek
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

7.  One-dimensional model of yeast prion aggregation.

Authors:  K C Kunes; D L Cox; R R P Singh
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-11-09

8.  On the nucleation and growth of amyloid beta-protein fibrils: detection of nuclei and quantitation of rate constants.

Authors:  A Lomakin; D S Chung; G B Benedek; D A Kirschner; D B Teplow
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-06       Impact factor: 11.205

9.  Kinetics of sickle hemoglobin polymerization. II. A double nucleation mechanism.

Authors:  F A Ferrone; J Hofrichter; W A Eaton
Journal:  J Mol Biol       Date:  1985-06-25       Impact factor: 5.469

10.  Mechanism of prion propagation: amyloid growth occurs by monomer addition.

Authors:  Sean R Collins; Adam Douglass; Ronald D Vale; Jonathan S Weissman
Journal:  PLoS Biol       Date:  2004-09-21       Impact factor: 8.029

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  8 in total

1.  A variational model for oligomer-formation process of GNNQQNY peptide from yeast prion protein Sup35.

Authors:  Xianghong Qi; Liu Hong; Yang Zhang
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

2.  Growth-incompetent monomers of human calcitonin lead to a noncanonical direct relationship between peptide concentration and aggregation lag time.

Authors:  Kian Kamgar-Parsi; Liu Hong; Akira Naito; Charles L Brooks; Ayyalusamy Ramamoorthy
Journal:  J Biol Chem       Date:  2017-07-24       Impact factor: 5.157

3.  Simple moment-closure model for the self-assembly of breakable amyloid filaments.

Authors:  Liu Hong; Wen-An Yong
Journal:  Biophys J       Date:  2013-02-05       Impact factor: 4.033

4.  Gallium nanoparticles as novel inhibitors of Aβ40 aggregation.

Authors:  Kyabeth M Torres; Ambar S Delgado; Erika R Serrano; Nitza V Falcón-Cruz; Anamaris Meléndez; Idalia Ramos; Deguo Du; Rolando Oyola
Journal:  Mater Adv       Date:  2021-07-09

5.  Measurement of Tau Filament Fragmentation Provides Insights into Prion-like Spreading.

Authors:  Franziska Kundel; Liu Hong; Benjamin Falcon; William A McEwan; Thomas C T Michaels; Georg Meisl; Noemi Esteras; Andrey Y Abramov; Tuomas J P Knowles; Michel Goedert; David Klenerman
Journal:  ACS Chem Neurosci       Date:  2018-04-08       Impact factor: 4.418

6.  A necessary condition for coexistence of autocatalytic replicators in a prebiotic environment.

Authors:  Andres F Hernandez; Martha A Grover
Journal:  Life (Basel)       Date:  2013-07-24

Review 7.  Statistical mechanical treatments of protein amyloid formation.

Authors:  John S Schreck; Jian-Min Yuan
Journal:  Int J Mol Sci       Date:  2013-08-23       Impact factor: 5.923

8.  Nanoscale Control of Amyloid Self-Assembly Using Protein Phase Transfer by Host-Guest Chemistry.

Authors:  Tae Su Choi; Hong Hee Lee; Young Ho Ko; Kwang Seob Jeong; Kimoon Kim; Hugh I Kim
Journal:  Sci Rep       Date:  2017-07-18       Impact factor: 4.379

  8 in total

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