Literature DB >> 22122331

Allosteric modulators can restore function in an amino acid neurotransmitter receptor by slightly altering intra-molecular communication pathways.

Ruth Nussinov1.   

Abstract

Mutations, even if not directly in the ligand binding sites of proteins, can lead to disease. In cell surface receptors, this can happen if they uncouple conformational changes that take place upon agonist (or antagonist) binding to the extracellular domain and the intracellular response. Uncoupling can take place by disrupting a major allosteric propagation pathway between the extra- and intracellular domains. Here I provide a mechanistic explanation: I first describe how propagation takes place; second, what can happen in the presence of a disease-related mutation which is distant from the binding site; and finally, how drugs may overcome this disruption and rescue function. The mutations in the glycine receptor α1 subunit (α1R271Q/L) which cause the neuromotor disorder hyperekplexia are on example of such allosteric mutations. In this issue of the BJP, Shan et al. show that normal function was restored to these mutant receptors by substitution of the segment which contained the mutated position, by a homologous one. An allosteric drug could mimic the effects of such substitution. Within this framework, I highlight the advantages of allosteric drugs and the challenges in their design.
© 2011 The Author. British Journal of Pharmacology © 2011 The British Pharmacological Society.

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Year:  2012        PMID: 22122331      PMCID: PMC3413848          DOI: 10.1111/j.1476-5381.2011.01793.x

Source DB:  PubMed          Journal:  Br J Pharmacol        ISSN: 0007-1188            Impact factor:   8.739


  16 in total

1.  Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces.

Authors:  Buyong Ma; Tal Elkayam; Haim Wolfson; Ruth Nussinov
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-01       Impact factor: 11.205

2.  Function of hyperekplexia-causing α1R271Q/L glycine receptors is restored by shifting the affected residue out of the allosteric signalling pathway.

Authors:  Qiang Shan; Lu Han; Joseph W Lynch
Journal:  Br J Pharmacol       Date:  2012-04       Impact factor: 8.739

Review 3.  Hyperekplexia: a treatable neurogenetic disease.

Authors:  Lan Zhou; Kipp L Chillag; Michael A Nigro
Journal:  Brain Dev       Date:  2002-10       Impact factor: 1.961

Review 4.  Molecular structure and function of the glycine receptor chloride channel.

Authors:  Joseph W Lynch
Journal:  Physiol Rev       Date:  2004-10       Impact factor: 37.312

5.  Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure.

Authors:  John A Capra; Roman A Laskowski; Janet M Thornton; Mona Singh; Thomas A Funkhouser
Journal:  PLoS Comput Biol       Date:  2009-12-04       Impact factor: 4.475

Review 6.  The origin of allosteric functional modulation: multiple pre-existing pathways.

Authors:  Antonio del Sol; Chung-Jung Tsai; Buyong Ma; Ruth Nussinov
Journal:  Structure       Date:  2009-08-12       Impact factor: 5.006

Review 7.  Allosteric modulators of GPCRs: a novel approach for the treatment of CNS disorders.

Authors:  P Jeffrey Conn; Arthur Christopoulos; Craig W Lindsley
Journal:  Nat Rev Drug Discov       Date:  2009-01       Impact factor: 84.694

Review 8.  Acquired resistance to tyrosine kinase inhibitors during cancer therapy.

Authors:  Jeffrey A Engelman; Jeffrey Settleman
Journal:  Curr Opin Genet Dev       Date:  2008-03-05       Impact factor: 5.578

9.  PKC maturation is promoted by nucleotide pocket occupation independently of intrinsic kinase activity.

Authors:  Angus J M Cameron; Cristina Escribano; Adrian T Saurin; Brenda Kostelecky; Peter J Parker
Journal:  Nat Struct Mol Biol       Date:  2009-05-24       Impact factor: 15.369

10.  Inhibitor hijacking of Akt activation.

Authors:  Tatsuya Okuzumi; Dorothea Fiedler; Chao Zhang; Daniel C Gray; Brian Aizenstein; Randy Hoffman; Kevan M Shokat
Journal:  Nat Chem Biol       Date:  2009-05-24       Impact factor: 15.040

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  6 in total

1.  The different ways through which specificity works in orthosteric and allosteric drugs.

Authors:  Ruth Nussinov; Chung-Jung Tsai
Journal:  Curr Pharm Des       Date:  2012       Impact factor: 3.116

2.  The spatial structure of cell signaling systems.

Authors:  Ruth Nussinov
Journal:  Phys Biol       Date:  2013-08-02       Impact factor: 2.583

Review 3.  Recent advances suggest increased influence of selective pressure in allostery.

Authors:  Archana S Bhat; Richard Dustin Schaeffer; Lisa Kinch; Kirill E Medvedev; Nick V Grishin
Journal:  Curr Opin Struct Biol       Date:  2020-04-14       Impact factor: 6.809

Review 4.  The impact of human hyperekplexia mutations on glycine receptor structure and function.

Authors:  Anna Bode; Joseph W Lynch
Journal:  Mol Brain       Date:  2014-01-09       Impact factor: 4.041

Review 5.  Principles of allosteric interactions in cell signaling.

Authors:  Ruth Nussinov; Chung-Jung Tsai; Jin Liu
Journal:  J Am Chem Soc       Date:  2014-12-15       Impact factor: 15.419

6.  Using THz Spectroscopy, Evolutionary Network Analysis Methods, and MD Simulation to Map the Evolution of Allosteric Communication Pathways in c-Type Lysozymes.

Authors:  Kristina N Woods; Juergen Pfeffer
Journal:  Mol Biol Evol       Date:  2015-09-03       Impact factor: 16.240

  6 in total

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