Literature DB >> 22122266

The area under the disease progress stairs: calculation, advantage, and application.

Ivan Simko1, Hans-Peter Piepho.   

Abstract

The area under the disease progress curve (AUDPC) is frequently used to combine multiple observations of disease progress into a single value. However, our analysis shows that this approach severely underestimates the effect of the first and last observation. To get a better estimate of disease progress, we have developed a new formula termed the area under the disease progress stairs (AUDPS). The AUDPS approach improves the estimation of disease progress by giving a weight closer to optimal to the first and last observations. Analysis of real data indicates that AUDPS outperforms AUDPC in most of the tested trials and may be less precise than AUDPC only when assessments in the first or last observations have a comparatively large variance. We propose using AUDPS and its standardized (sAUDPS) and relative (rAUDPS) forms when combining multiple observations from disease progress experiments into a single value.

Mesh:

Substances:

Year:  2012        PMID: 22122266     DOI: 10.1094/PHYTO-07-11-0216

Source DB:  PubMed          Journal:  Phytopathology        ISSN: 0031-949X            Impact factor:   4.025


  43 in total

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3.  A growth-defense trade-off is general across native and exotic grasses.

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4.  Genome-wide association mapping reveals genomic regions frequently associated with lettuce field resistance to downy mildew.

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Journal:  Theor Appl Genet       Date:  2022-04-13       Impact factor: 5.699

5.  Pyramiding of nine transgenes in maize generates high-level resistance against necrotrophic maize pathogens.

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7.  Resistance to Rhynchosporium commune in a collection of European spring barley germplasm.

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Journal:  Theor Appl Genet       Date:  2018-08-27       Impact factor: 5.699

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Journal:  Microorganisms       Date:  2021-04-27

9.  Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4.

Authors:  Mark E Looseley; Lucie L Griffe; Bianca Büttner; Kathryn M Wright; Micha M Bayer; Max Coulter; Jean-Noël Thauvin; Jill Middlefell-Williams; Marta Maluk; Aleksandra Okpo; Nicola Kettles; Peter Werner; Ed Byrne; Anna Avrova
Journal:  Theor Appl Genet       Date:  2020-01-22       Impact factor: 5.699

10.  Phenotyping Flowering in Canola (Brassica napus L.) and Estimating Seed Yield Using an Unmanned Aerial Vehicle-Based Imagery.

Authors:  Ti Zhang; Sally Vail; Hema S N Duddu; Isobel A P Parkin; Xulin Guo; Eric N Johnson; Steven J Shirtliffe
Journal:  Front Plant Sci       Date:  2021-06-17       Impact factor: 5.753

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