Literature DB >> 2211604

Vibrational spectroscopy of bacteriorhodopsin mutants. Evidence for the interaction of aspartic acid 212 with tyrosine 185 and possible role in the proton pump mechanism.

K J Rothschild1, M S Braiman, Y W He, T Marti, H G Khorana.   

Abstract

The role of Asp-212 in the proton pumping mechanism of bacteriorhodopsin (bR) has been studied by a combination of site-directed mutagenesis and Fourier transform infrared difference spectroscopy. Difference spectra were recorded at low temperature for the bR----K and bR----M photoreactions of the mutants Asp-212----Glu, Asp-212----Asn, and Asp-212----Ala. Despite an increased proportion of the 13-cis form of bR (normally associated with dark adaptation), all of the mutants exhibited a light-adapted form containing as a principal component the normal all-trans retinal chromophore. The absence of a shift in the retinal C = C stretching frequency in these mutants indicates that Asp-212 is not a major determinant of the visible absorption wavelength maximum in light-adapted bR. It is unlikely that Asp-212 is the acceptor group for the Schiff base proton since both the Asp-212----Glu and Asp-212----Ala mutants formed an M intermediate. All of the Asp-212 mutants were missing a Fourier transform infrared difference band that had been assigned previously to protonation changes of Tyr-185. These results are discussed in terms of a model in which Tyr-185 and Asp-212 form a polarizable hydrogen bond and are positioned near the C13-Schiff base portion of the chromophore. These 2 residues may be involved in stabilizing the relative orientation of the F and G helices and isomerizing the retinal in a regioselective manner about the C13 = C14 double bond.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2211604

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  Structure of the bacteriorhodopsin mutant F219L N intermediate revealed by electron crystallography.

Authors:  J Vonck
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

2.  Control of the pump cycle in bacteriorhodopsin: mechanisms elucidated by solid-state NMR of the D85N mutant.

Authors:  Mary E Hatcher; Jingui G Hu; Marina Belenky; Peter Verdegem; Johan Lugtenburg; Robert G Griffin; Judith Herzfeld
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

Review 3.  FTIR difference spectroscopy of bacteriorhodopsin: toward a molecular model.

Authors:  K J Rothschild
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

4.  Uv-visible spectroscopy of bacteriorhodopsin mutants: substitution of Arg-82, Asp-85, Tyr-185, and Asp-212 results in abnormal light-dark adaptation.

Authors:  M Duñach; T Marti; H G Khorana; K J Rothschild
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

5.  The reaction of hydroxylamine with bacteriorhodopsin studied with mutants that have altered photocycles: selective reactivity of different photointermediates.

Authors:  S Subramaniam; T Marti; S J Rösselet; K J Rothschild; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

6.  Protein dynamics in the bacteriorhodopsin photocycle: submillisecond Fourier transform infrared spectra of the L, M, and N photointermediates.

Authors:  M S Braiman; O Bousché; K J Rothschild
Journal:  Proc Natl Acad Sci U S A       Date:  1991-03-15       Impact factor: 11.205

7.  Fourier transform infrared spectroscopic analysis of altered reaction pathways in site-directed mutants: the D212N mutant of bacteriorhodopsin expressed in Halobacterium halobium.

Authors:  M S Braiman; A L Klinger; R Doebler
Journal:  Biophys J       Date:  1992-04       Impact factor: 4.033

8.  Characterization of the primary photochemistry of proteorhodopsin with femtosecond spectroscopy.

Authors:  Alisa Rupenyan; Ivo H M van Stokkum; Jos C Arents; Rienk van Grondelle; Klaas Hellingwerf; Marie Louise Groot
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

9.  An in trans interaction at the interface of the helicase and primase domains of the hexameric gene 4 protein of bacteriophage T7 modulates their activities.

Authors:  Bin Zhu; Seung-Joo Lee; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

10.  Proton transfers in a channelrhodopsin-1 studied by Fourier transform infrared (FTIR) difference spectroscopy and site-directed mutagenesis.

Authors:  John I Ogren; Adrian Yi; Sergey Mamaev; Hai Li; John L Spudich; Kenneth J Rothschild
Journal:  J Biol Chem       Date:  2015-03-23       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.