Literature DB >> 22102240

Crystallization, high-resolution data collection and preliminary crystallographic analysis of Aura virus capsid protease and its complex with dioxane.

Megha Aggarwal1, Sonali Dhindwal, Shivendra Pratap, Richard J Kuhn, Pravindra Kumar, Shailly Tomar.   

Abstract

The C-terminal protease domain of capsid protein from Aura virus expressed in a bacterial expression system has been purified to homogeneity and crystallized. Crystals suitable for X-ray diffraction analysis were obtained by the vapour-diffusion method using 0.1 M bis-tris and polyethylene glycol monomethyl ether 2000. Crystals of the C-terminal protease domain of capsid protein in complex with dioxane were also produced and crystal data were obtained. Both crystals belonged to space group C2, with unit-cell parameters a = 79.6, b = 35.2, c = 49.5 Å. High-resolution data sets were collected to a resolution of 1.81 Å for the native protein and 1.98 Å for the complex. Preliminary crystallographic studies suggested the presence of a single molecule in the crystallographic asymmetric unit, with a solvent content of 38.5%.
© 2011 International Union of Crystallography. All rights reserved.

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Year:  2011        PMID: 22102240      PMCID: PMC3212459          DOI: 10.1107/S174430911103404X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  30 in total

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Authors:  R Perera; K E Owen; T L Tellinghuisen; A E Gorbalenya; R J Kuhn
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

2.  In vitro-assembled alphavirus core-like particles maintain a structure similar to that of nucleocapsid cores in mature virus.

Authors:  Suchetana Mukhopadhyay; Paul R Chipman; Eunmee M Hong; Richard J Kuhn; Michael G Rossmann
Journal:  J Virol       Date:  2002-11       Impact factor: 5.103

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Journal:  Gene       Date:  1990-11-30       Impact factor: 3.688

4.  Catalytic core of alphavirus nonstructural protein nsP4 possesses terminal adenylyltransferase activity.

Authors:  Shailly Tomar; Richard W Hardy; Janet L Smith; Richard J Kuhn
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

5.  Nucleotide sequence of the 26 S mRNA of the virulent Trinidad donkey strain of Venezuelan equine encephalitis virus and deduced sequence of the encoded structural proteins.

Authors:  R M Kinney; B J Johnson; V L Brown; D W Trent
Journal:  Virology       Date:  1986-07-30       Impact factor: 3.616

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Journal:  Virology       Date:  1988-04       Impact factor: 3.616

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Authors:  G Aliperti; M J Schlesinger
Journal:  Virology       Date:  1978-10-15       Impact factor: 3.616

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Authors:  R S Levinson; J H Strauss; E G Strauss
Journal:  Virology       Date:  1990-03       Impact factor: 3.616

9.  Structure of Sindbis virus core protein reveals a chymotrypsin-like serine proteinase and the organization of the virion.

Authors:  H K Choi; L Tong; W Minor; P Dumas; U Boege; M G Rossmann; G Wengler
Journal:  Nature       Date:  1991-11-07       Impact factor: 49.962

10.  The cytoplasmic domain of alphavirus E2 glycoprotein contains a short linear recognition signal required for viral budding.

Authors:  M Kail; M Hollinshead; W Ansorge; R Pepperkok; R Frank; G Griffiths; D Vaux
Journal:  EMBO J       Date:  1991-09       Impact factor: 11.598

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  3 in total

1.  trans-Protease activity and structural insights into the active form of the alphavirus capsid protease.

Authors:  Megha Aggarwal; Sonali Dhindwal; Pravindra Kumar; Richard J Kuhn; Shailly Tomar
Journal:  J Virol       Date:  2014-08-06       Impact factor: 5.103

2.  Kinetic characterization of trans-proteolytic activity of Chikungunya virus capsid protease and development of a FRET-based HTS assay.

Authors:  Megha Aggarwal; Rajesh Sharma; Pravindra Kumar; Manmohan Parida; Shailly Tomar
Journal:  Sci Rep       Date:  2015-10-06       Impact factor: 4.379

3.  Crystal structure of aura virus capsid protease and its complex with dioxane: new insights into capsid-glycoprotein molecular contacts.

Authors:  Megha Aggarwal; Satya Tapas; Anjul Siwach; Pravindra Kumar; Richard J Kuhn; Shailly Tomar
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

  3 in total

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