Literature DB >> 22101266

Keeping chromatin quiet: how nucleosome remodeling restores heterochromatin after replication.

Jacqueline E Mermoud1, Samuel P Rowbotham, Patrick D Varga-Weisz.   

Abstract

Disruption of chromatin organization during replication poses a major challenge to the maintenance and integrity of genome organization. It creates the need to accurately reconstruct the chromatin landscape following DNA duplication but there is little mechanistic understanding of how chromatin based modifications are restored on newly synthesized DNA. ATP-dependent chromatin remodeling activities serve multiple roles during replication and recent work underscores their requirement in the maintenance of proper chromatin organization. A new component of chromatin replication, the SWI/SNF-like chromatin remodeler SMARCAD1, acts at replication sites to facilitate deacetylation of newly assembled histones. Deacetylation is a pre-requisite for the restoration of epigenetic signatures in heterochromatin regions following replication. In this way, SMARCAD1, in concert with histone modifying activities and transcriptional repressors, reinforces epigenetic instructions to ensure that silenced loci are correctly perpetuated in each replication cycle. The emerging concept is that remodeling of nucleosomes is an early event imperative to promote the re-establishment of histone modifications following DNA replication.

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Year:  2011        PMID: 22101266      PMCID: PMC3272284          DOI: 10.4161/cc.10.23.18558

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  91 in total

1.  hMSH3 and hMSH6 interact with PCNA and colocalize with it to replication foci.

Authors:  H E Kleczkowska; G Marra; T Lettieri; J Jiricny
Journal:  Genes Dev       Date:  2001-03-15       Impact factor: 11.361

2.  SHREC, an effector complex for heterochromatic transcriptional silencing.

Authors:  Tomoyasu Sugiyama; Hugh P Cam; Rie Sugiyama; Ken-ichi Noma; Martin Zofall; Ryuji Kobayashi; Shiv I S Grewal
Journal:  Cell       Date:  2007-02-09       Impact factor: 41.582

Review 3.  Making copies of chromatin: the challenge of nucleosomal organization and epigenetic information.

Authors:  Armelle Corpet; Geneviève Almouzni
Journal:  Trends Cell Biol       Date:  2008-11-20       Impact factor: 20.808

4.  Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-I.

Authors:  P D Kaufman; R Kobayashi; B Stillman
Journal:  Genes Dev       Date:  1997-02-01       Impact factor: 11.361

5.  Replication stress interferes with histone recycling and predeposition marking of new histones.

Authors:  Zuzana Jasencakova; Annette N D Scharf; Katrine Ask; Armelle Corpet; Axel Imhof; Geneviève Almouzni; Anja Groth
Journal:  Mol Cell       Date:  2010-03-12       Impact factor: 17.970

6.  Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

Authors:  R E Sobel; R G Cook; C A Perry; A T Annunziato; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

7.  CHD1 associates with NCoR and histone deacetylase as well as with RNA splicing proteins.

Authors:  Helen H Tai; Margit Geisterfer; John C Bell; Mariko Moniwa; James R Davie; Lorrie Boucher; Michael W McBurney
Journal:  Biochem Biophys Res Commun       Date:  2003-08-15       Impact factor: 3.575

8.  Deletion analysis of the large subunit p140 in human replication factor C reveals regions required for complex formation and replication activities.

Authors:  F Uhlmann; J Cai; E Gibbs; M O'Donnell; J Hurwitz
Journal:  J Biol Chem       Date:  1997-04-11       Impact factor: 5.157

9.  A small peptide inhibitor of DNA replication defines the site of interaction between the cyclin-dependent kinase inhibitor p21WAF1 and proliferating cell nuclear antigen.

Authors:  E Warbrick; D P Lane; D M Glover; L S Cox
Journal:  Curr Biol       Date:  1995-03-01       Impact factor: 10.834

10.  The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation.

Authors:  Annelie Strålfors; Julian Walfridsson; Hasanuzzaman Bhuiyan; Karl Ekwall
Journal:  PLoS Genet       Date:  2011-03-17       Impact factor: 5.917

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  18 in total

Review 1.  Chromatin remodeling and mismatch repair: Access and excision.

Authors:  Eva M Goellner
Journal:  DNA Repair (Amst)       Date:  2019-10-17

Review 2.  Heterochromatin and the molecular mechanisms of 'parent-of-origin' effects in animals.

Authors:  Prim B Singh
Journal:  J Biosci       Date:  2016-12       Impact factor: 1.826

3.  Role of epigenetic modulation for the treatment of sarcoma.

Authors:  Gregory M Cote; Edwin Choy
Journal:  Curr Treat Options Oncol       Date:  2013-09

Review 4.  Chromatin dynamics: interplay between remodeling enzymes and histone modifications.

Authors:  Sarah G Swygert; Craig L Peterson
Journal:  Biochim Biophys Acta       Date:  2014-02-28

5.  Chromatin remodeling: a collaborative effort.

Authors:  Patrick D Varga-Weisz
Journal:  Nat Struct Mol Biol       Date:  2014-01       Impact factor: 15.369

Review 6.  Epigenetic control of mobile DNA as an interface between experience and genome change.

Authors:  James A Shapiro
Journal:  Front Genet       Date:  2014-04-25       Impact factor: 4.599

7.  DNA methylation and differential gene regulation in photoreceptor cell death.

Authors:  P Farinelli; A Perera; B Arango-Gonzalez; D Trifunovic; M Wagner; T Carell; M Biel; E Zrenner; S Michalakis; F Paquet-Durand; P A R Ekström
Journal:  Cell Death Dis       Date:  2014-12-04       Impact factor: 8.469

Review 8.  Repair of DNA Double-Strand Breaks in Heterochromatin.

Authors:  Felicity Z Watts
Journal:  Biomolecules       Date:  2016-12-16

9.  Targeting EZH2-mediated methylation of H3K27 inhibits proliferation and migration of Synovial Sarcoma in vitro.

Authors:  Jacson K Shen; Gregory M Cote; Yan Gao; Edwin Choy; Henry J Mankin; Francis J Hornicek; Zhenfeng Duan
Journal:  Sci Rep       Date:  2016-04-29       Impact factor: 4.379

10.  SMARCAD1 is an ATP-dependent stimulator of nucleosomal H2A acetylation via CBP, resulting in transcriptional regulation.

Authors:  Masamichi Doiguchi; Takeya Nakagawa; Yuko Imamura; Mitsuhiro Yoneda; Miki Higashi; Kazuishi Kubota; Satoshi Yamashita; Hiroshi Asahara; Midori Iida; Satoshi Fujii; Tsuyoshi Ikura; Ziying Liu; Tulip Nandu; W Lee Kraus; Hitoshi Ueda; Takashi Ito
Journal:  Sci Rep       Date:  2016-02-18       Impact factor: 4.379

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