Literature DB >> 22098720

Super-resolution fluorescence microscopy as a tool to study the nanoscale organization of chromosomes.

Cristina Flors1, William C Earnshaw.   

Abstract

Chromatin organization spans a wide range of structural complexity. Substructures at the 10-200nm scale are poorly characterized, especially in living cells, due to the limitations of electron microscopy and standard optical microscopy. Recently developed super-resolution fluorescence microscopy methods represent an exciting opportunity to access those substructures, and recent progress with these techniques has yielded insights into chromatin organization at different condensation stages. Recent studies have focused on confronting the challenges that are specific to chromatin super-resolution imaging, such as the high packing density of mitotic chromosomes and difficulties in interpreting interphase chromatin images. Building on these first results and with ongoing rapid technical advances in super-resolution fluorescence imaging there is great potential to uncover new features with unprecedented detail.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 22098720     DOI: 10.1016/j.cbpa.2011.10.004

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  13 in total

Review 1.  Contribution of advanced fluorescence nano microscopy towards revealing mitotic chromosome structure.

Authors:  S W Botchway; S Farooq; A Sajid; I K Robinson; M Yusuf
Journal:  Chromosome Res       Date:  2021-03-09       Impact factor: 5.239

2.  Versatile design and synthesis platform for visualizing genomes with Oligopaint FISH probes.

Authors:  Brian J Beliveau; Eric F Joyce; Nicholas Apostolopoulos; Feyza Yilmaz; Chamith Y Fonseka; Ruth B McCole; Yiming Chang; Jin Billy Li; Tharanga Niroshini Senaratne; Benjamin R Williams; Jean-Marie Rouillard; Chao-ting Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-11       Impact factor: 11.205

3.  Ordered arrays of native chromatin molecules for high-resolution imaging and analysis.

Authors:  Aline Cerf; Harvey C Tian; Harold G Craighead
Journal:  ACS Nano       Date:  2012-08-01       Impact factor: 15.881

Review 4.  Visualizing cell structure and function with point-localization superresolution imaging.

Authors:  Prabuddha Sengupta; Schuyler Van Engelenburg; Jennifer Lippincott-Schwartz
Journal:  Dev Cell       Date:  2012-12-11       Impact factor: 12.270

5.  Quantifying spatial organization in point-localization superresolution images using pair correlation analysis.

Authors:  Prabuddha Sengupta; Tijana Jovanovic-Talisman; Jennifer Lippincott-Schwartz
Journal:  Nat Protoc       Date:  2013-01-24       Impact factor: 13.491

6.  Synthesis and evaluation of fluorescent cap analogues for mRNA labelling.

Authors:  Marcin Ziemniak; Mariusz Szabelski; Maciej Lukaszewicz; Anna Nowicka; Edward Darzynkiewicz; Robert E Rhoads; Zbigniew Wieczorek; Jacek Jemielity
Journal:  RSC Adv       Date:  2013       Impact factor: 3.361

7.  Localized, non-random differences in chromatin accessibility between homologous metaphase chromosomes.

Authors:  Wahab A Khan; Peter K Rogan; Joan Hm Knoll
Journal:  Mol Cytogenet       Date:  2014-11-19       Impact factor: 2.009

8.  Single-molecule super-resolution imaging of chromosomes and in situ haplotype visualization using Oligopaint FISH probes.

Authors:  Brian J Beliveau; Alistair N Boettiger; Maier S Avendaño; Ralf Jungmann; Ruth B McCole; Eric F Joyce; Caroline Kim-Kiselak; Frédéric Bantignies; Chamith Y Fonseka; Jelena Erceg; Mohammed A Hannan; Hien G Hoang; David Colognori; Jeannie T Lee; William M Shih; Peng Yin; Xiaowei Zhuang; Chao-ting Wu
Journal:  Nat Commun       Date:  2015-05-12       Impact factor: 14.919

9.  Reversible fluorescence photoswitching in DNA.

Authors:  Darren A Smith; Philipp Holliger; Cristina Flors
Journal:  J Phys Chem B       Date:  2012-08-16       Impact factor: 2.991

Review 10.  Advanced fluorescence microscopy methods for the real-time study of transcription and chromatin dynamics.

Authors:  Paolo Annibale; Enrico Gratton
Journal:  Transcription       Date:  2014
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