Literature DB >> 22095844

Quality control in tRNA charging.

Hieronim Jakubowski1.   

Abstract

Faithful translation of the genetic code during protein synthesis is fundamental to the growth, development, and function of living organisms. Aminoacyl-tRNA synthetases (AARSs), which define the genetic code by correctly pairing amino acids with their cognate tRNAs, are responsible for 'quality control' in the flow of information from a gene to a protein. When differences in binding energies of amino acids to an AARS are inadequate, editing is used to achieve high selectivity. Editing occurs at the synthetic active site by hydrolysis of noncognate aminoacyl-adenylates (pretransfer editing) and at a dedicated editing site located in a separate domain by deacylation of mischarged aminoacyl-tRNA (posttransfer editing). Access of nonprotein amino acids, such as homocysteine or ornithine, to the genetic code is prevented by the editing function of AARSs, which functionally partitions amino acids present in living cells into protein and nonprotein amino acids. Continuous editing is part of the tRNA aminoacylation process in living organisms from bacteria to human beings. Preventing mistranslation by the clearance of misactivated amino acids is crucial to cellular homeostasis and has a role in etiology of disease. Although there is a strong selective pressure to minimize mistranslation, some organisms possess error-prone AARSs that cause mistranslation. Elevated levels of mistranslation and the synthesis of statistical proteins can be beneficial for pathogens by increasing phenotypic variation essential for the evasion of host defenses.
Copyright © 2011 John Wiley & Sons, Ltd.

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Year:  2011        PMID: 22095844     DOI: 10.1002/wrna.122

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  23 in total

1.  Kinetic partitioning between synthetic and editing pathways in class I aminoacyl-tRNA synthetases occurs at both pre-transfer and post-transfer hydrolytic steps.

Authors:  Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

2.  Quality control by trans-editing factor prevents global mistranslation of non-protein amino acid α-aminobutyrate.

Authors:  Jo Marie Bacusmo; Alexandra B Kuzmishin; William A Cantara; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

3.  Not an inside job: non-coded amino acids compromise the genetic code.

Authors:  Lluís Ribas de Pouplana
Journal:  EMBO J       Date:  2014-06-21       Impact factor: 11.598

Review 4.  Stress Response and Adaptation Mediated by Amino Acid Misincorporation during Protein Synthesis.

Authors:  Xiaoyun Wang; Tao Pan
Journal:  Adv Nutr       Date:  2016-07-15       Impact factor: 8.701

5.  MS-READ: Quantitative measurement of amino acid incorporation.

Authors:  Kyle Mohler; Hans-Rudolf Aerni; Brandon Gassaway; Jiqiang Ling; Michael Ibba; Jesse Rinehart
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-01-24       Impact factor: 3.770

6.  Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation.

Authors:  Ziwei Liu; Oscar Vargas-Rodriguez; Yuki Goto; Eva Maria Novoa; Lluís Ribas de Pouplana; Hiroaki Suga; Karin Musier-Forsyth
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

Review 7.  Controlling translation via modulation of tRNA levels.

Authors:  Jeremy E Wilusz
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-04-28       Impact factor: 9.957

8.  A WHEP Domain Regulates the Dynamic Structure and Activity of Caenorhabditis elegans Glycyl-tRNA Synthetase.

Authors:  Chih-Yao Chang; Chin-I Chien; Chia-Pei Chang; Bo-Chun Lin; Chien-Chia Wang
Journal:  J Biol Chem       Date:  2016-06-13       Impact factor: 5.157

9.  Identification and Characterization of Chemical Compounds that Inhibit Leucyl-tRNA Synthetase from Pseudomonas aeruginosa.

Authors:  Regina Zamacona; Pamela N Chavero; Eduardo Medellin; Yanmei Hu; Casey A Hughes; Nathalie Quach; Megan Keniry; James M Bullard
Journal:  Curr Drug Discov Technol       Date:  2020

10.  Structural changes of fibrinogen molecule mediated by the N-homocysteinylation reaction.

Authors:  Valeria Genoud; Paula G Quintana; Silvana Gionco; Alicia Baldessari; Irene Quintana
Journal:  J Thromb Thrombolysis       Date:  2018-01       Impact factor: 2.300

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