Literature DB >> 22095682

Proper calibration of ultrasonic power enabled the quantitative analysis of the ultrasonication-induced amyloid formation process.

Kei-ichi Yamaguchi1, Tomoharu Matsumoto, Kazuo Kuwata.   

Abstract

To elucidate the mechanisms of ultrasonication on the amyloid fibril formation, we quantitatively determined the ultrasonic power using both calorimetry and potassium iodide (KI) oxidation, and under the properly calibrated ultrasonic power, we investigated the ultasonication-induced amyloid formation process of the mouse prion protein (mPrP(23-231)). These methods revealed that the ultrasonic power in our system ranged from 0.3 to 2.7 W but entirely dependent on the positions of the ultrasonic stage. Intriguingly, the nucleation time of the amyloid fibrils was found to be shortened almost proportionally to the ultrasonic power, indicating that the probability of the occurrence of nucleus formation increases proportionally to the ultrasonic power. Moreover, mPrP(23-231) formed two types of aggregates: rigid fibrils and short fibrils with disordered aggregates, depending on the ultrasonic power. The nucleation of rigid fibrils required an ultrasonic power larger than 1.5 W. While at the strong ultrasonic power larger than 2.6 W, amyloid fibrils were formed early, but simultaneously fine fragmentation of fibrils occurred. Thus, an ultrasonic power of approximately 2.0 W would be suitable for the formation of rigid mPrP(23-231) fibrils under the conditions utilized (ultrasonication applied for 30 s every 9 min). As ultrasonication has been widely used to amplify the scrapie form of the prion protein, or other amyloids in vitro, the calorimetry and KI oxidation methods proposed here might help determining the adequate ultrasonic powers necessary to amplify them efficiently.
Copyright © 2011 The Protein Society.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22095682      PMCID: PMC3323779          DOI: 10.1002/pro.755

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  37 in total

1.  Sensitive detection of pathological prion protein by cyclic amplification of protein misfolding.

Authors:  G P Saborio; B Permanne; C Soto
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

2.  Effects of ultrasonic frequency and liquid height on sonochemical efficiency of large-scale sonochemical reactors.

Authors:  Yoshiyuki Asakura; Tomoyuki Nishida; Tatsuro Matsuoka; Shinobu Koda
Journal:  Ultrason Sonochem       Date:  2007-04-22       Impact factor: 7.491

3.  Critical region for amyloid fibril formation of mouse prion protein: unusual amyloidogenic properties of the helix 2 peptide.

Authors:  Kei-ichi Yamaguchi; Tomoharu Matsumoto; Kazuo Kuwata
Journal:  Biochemistry       Date:  2008-12-16       Impact factor: 3.162

4.  Generating a prion with bacterially expressed recombinant prion protein.

Authors:  Fei Wang; Xinhe Wang; Chong-Gang Yuan; Jiyan Ma
Journal:  Science       Date:  2010-01-28       Impact factor: 47.728

5.  Detection of infectious prions in urine.

Authors:  Dennisse Gonzalez-Romero; Marcelo A Barria; Patricia Leon; Rodrigo Morales; Claudio Soto
Journal:  FEBS Lett       Date:  2008-08-13       Impact factor: 4.124

6.  Synthetic mammalian prions.

Authors:  Giuseppe Legname; Ilia V Baskakov; Hoang-Oanh B Nguyen; Detlev Riesner; Fred E Cohen; Stephen J DeArmond; Stanley B Prusiner
Journal:  Science       Date:  2004-07-30       Impact factor: 47.728

7.  Hot spots in prion protein for pathogenic conversion.

Authors:  Kazuo Kuwata; Noriyuki Nishida; Tomoharu Matsumoto; Yuji O Kamatari; Junji Hosokawa-Muto; Kota Kodama; Hironori K Nakamura; Kiminori Kimura; Makoto Kawasaki; Yuka Takakura; Susumu Shirabe; Jiro Takata; Yasufumi Kataoka; Shigeru Katamine
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-06       Impact factor: 11.205

8.  Amyloid fibril formation in the context of full-length protein: effects of proline mutations on the amyloid fibril formation of beta2-microglobulin.

Authors:  Takeshi Chiba; Yoshihisa Hagihara; Takashi Higurashi; Kazuhiro Hasegawa; Hironobu Naiki; Yuji Goto
Journal:  J Biol Chem       Date:  2003-09-04       Impact factor: 5.157

9.  Transmission of prions from mule deer and elk with chronic wasting disease to transgenic mice expressing cervid PrP.

Authors:  Shawn R Browning; Gary L Mason; Tanya Seward; Mike Green; Gwyneth A J Eliason; Candace Mathiason; Michael W Miller; Elizabeth S Williams; Ed Hoover; Glenn C Telling
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

10.  Recombinant prion protein induces a new transmissible prion disease in wild-type animals.

Authors:  Natallia Makarava; Gabor G Kovacs; Olga Bocharova; Regina Savtchenko; Irina Alexeeva; Herbert Budka; Robert G Rohwer; Ilia V Baskakov
Journal:  Acta Neuropathol       Date:  2010-01-06       Impact factor: 17.088

View more
  7 in total

Review 1.  Formation and properties of amyloid fibrils of prion protein.

Authors:  Kei-Ichi Yamaguchi; Kazuo Kuwata
Journal:  Biophys Rev       Date:  2017-12-04

2.  High-throughput analysis of ultrasonication-forced amyloid fibrillation reveals the mechanism underlying the large fluctuation in the lag time.

Authors:  Ayaka Umemoto; Hisashi Yagi; Masatomo So; Yuji Goto
Journal:  J Biol Chem       Date:  2014-08-12       Impact factor: 5.157

3.  Supersaturation-limited and Unlimited Phase Transitions Compete to Produce the Pathway Complexity in Amyloid Fibrillation.

Authors:  Masayuki Adachi; Masatomo So; Kazumasa Sakurai; József Kardos; Yuji Goto
Journal:  J Biol Chem       Date:  2015-06-10       Impact factor: 5.157

4.  Aldehyde Production as a Calibrant of Ultrasonic Power Delivery During Protein Misfolding Cyclic Amplification.

Authors:  Simon C Drew
Journal:  Protein J       Date:  2020-10-03       Impact factor: 2.371

5.  Nucleus factory on cavitation bubble for amyloid β fibril.

Authors:  Kichitaro Nakajima; Hirotsugu Ogi; Kanta Adachi; Kentaro Noi; Masahiko Hirao; Hisashi Yagi; Yuji Goto
Journal:  Sci Rep       Date:  2016-02-25       Impact factor: 4.379

6.  Dispersion of Nanomaterials in Aqueous Media: Towards Protocol Optimization.

Authors:  Inder Kaur; Laura-Jayne Ellis; Isabella Romer; Ratna Tantra; Marie Carriere; Soline Allard; Martine Mayne-L'Hermite; Caterina Minelli; Wolfgang Unger; Annegret Potthoff; Steffi Rades; Eugenia Valsami-Jones
Journal:  J Vis Exp       Date:  2017-12-25       Impact factor: 1.355

7.  Ultrasound-facilitated assembly and disassembly of a pH-sensitive self-assembly peptide.

Authors:  Rong Ni; Jianhui Liu; Ying Chau
Journal:  RSC Adv       Date:  2018-08-20       Impact factor: 3.361

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.