Literature DB >> 22095100

Salivary transcriptomic biomarkers for detection of ovarian cancer: for serous papillary adenocarcinoma.

Yu-Hsiang Lee1, Jae Hoon Kim, Hui Zhou, Bo Wook Kim, David T Wong.   

Abstract

Ovarian cancer is the most lethal gynecological cancer due to lack of clear symptom and reliable screening biomarker in the early stage. The capability to detect the initiation of malignancy with a sensitive and effective approach is one of the most desirable goals for ovarian cancer therapy. In this study, we spearheaded noninvasive detection of ovarian cancer by salivary transcriptomic biomarkers, and evaluated the clinical utilities of discovered biomarkers using a clinical case-control study. To find salivary mRNA biomarkers, salivary transcriptomes in 11 ovarian cancer patients and 11 matched controls were profiled by Affymetrix HG-U133-Plus-2.0 array. The biomarker candidates selected from the microarray results were then subjected to clinical validation by RT-qPCR using an independent sample cohort including 21 ovarian cancer patients and 35 healthy controls. Seven downregulated mRNA biomarkers were validated. The logistic regression model revealed the combination of five validated biomarkers (AGPAT1, B2M, BASP2, IER3, and IL1B) can significantly discriminate ovarian cancer patients (n = 21) from the healthy controls (n = 35), yielding a receiver operating characteristic plot, area under the curve value of 0.909 with 85.7% sensitivity and 91.4% specificity. In summary, we have demonstrated that the RNA signatures in saliva could serve as biomarkers for detection of ovarian cancer with high sensitivity and specificity. This emerging approach with high-throughput, noninvasive, and effective advantages provides a feasible means for detection of systemic cancer, and opens a new avenue for early disease detection.

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Year:  2011        PMID: 22095100     DOI: 10.1007/s00109-011-0829-0

Source DB:  PubMed          Journal:  J Mol Med (Berl)        ISSN: 0946-2716            Impact factor:   4.599


  34 in total

1.  OVX1, macrophage-colony stimulating factor, and CA-125-II as tumor markers for epithelial ovarian carcinoma: a critical appraisal.

Authors:  C van Haaften-Day; Y Shen; F Xu; Y Yu; A Berchuck; L J Havrilesky; H W de Bruijn; A G van der Zee; R C Bast; N F Hacker
Journal:  Cancer       Date:  2001-12-01       Impact factor: 6.860

2.  Salivary and plasma pharmacokinetics of topotecan in patients with metastatic epithelial ovarian cancer.

Authors:  M Boucaud; F Pinguet; S Poujol; G Romieu; D Cupissol; C Astre; S Culine; F Bressolle
Journal:  Eur J Cancer       Date:  2001-12       Impact factor: 9.162

3.  Analysis of chemotherapy response programs in ovarian cancers by the next-generation sequencing technologies.

Authors:  Lihua Cheng; Wei Lu; Bhushan Kulkarni; Tanja Pejovic; Xiaowei Yan; Jung-Hsien Chiang; Leroy Hood; Kunle Odunsi; Biaoyang Lin
Journal:  Gynecol Oncol       Date:  2010-02-23       Impact factor: 5.482

Review 4.  Tumor immune surveillance and ovarian cancer: lessons on immune mediated tumor rejection or tolerance.

Authors:  Lana E Kandalaft; Gregory T Motz; Jaikumar Duraiswamy; George Coukos
Journal:  Cancer Metastasis Rev       Date:  2011-03       Impact factor: 9.264

5.  Use of proteomic patterns in serum to identify ovarian cancer.

Authors:  Emanuel F Petricoin; Ali M Ardekani; Ben A Hitt; Peter J Levine; Vincent A Fusaro; Seth M Steinberg; Gordon B Mills; Charles Simone; David A Fishman; Elise C Kohn; Lance A Liotta
Journal:  Lancet       Date:  2002-02-16       Impact factor: 79.321

6.  Salivary transcriptomic biomarkers for detection of resectable pancreatic cancer.

Authors:  Lei Zhang; James J Farrell; Hui Zhou; David Elashoff; David Akin; No-Hee Park; David Chia; David T Wong
Journal:  Gastroenterology       Date:  2009-11-18       Impact factor: 22.682

7.  Identification of beta2-microglobulin as a potential target for ovarian cancer.

Authors:  Han Shuo Yang; Yu Li; Hong Xin Deng; Feng Peng
Journal:  Cancer Biol Ther       Date:  2009-12-02       Impact factor: 4.742

8.  Cancer statistics, 2009.

Authors:  Ahmedin Jemal; Rebecca Siegel; Elizabeth Ward; Yongping Hao; Jiaquan Xu; Michael J Thun
Journal:  CA Cancer J Clin       Date:  2009-05-27       Impact factor: 508.702

9.  Discovery and preclinical validation of salivary transcriptomic and proteomic biomarkers for the non-invasive detection of breast cancer.

Authors:  Lei Zhang; Hua Xiao; Scott Karlan; Hui Zhou; Jenny Gross; David Elashoff; David Akin; Xinmin Yan; David Chia; Beth Karlan; David T Wong
Journal:  PLoS One       Date:  2010-12-31       Impact factor: 3.240

10.  Pivotal evaluation of the accuracy of a biomarker used for classification or prediction: standards for study design.

Authors:  Margaret S Pepe; Ziding Feng; Holly Janes; Patrick M Bossuyt; John D Potter
Journal:  J Natl Cancer Inst       Date:  2008-10-07       Impact factor: 13.506

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  40 in total

Review 1.  Salivary biomarkers: toward future clinical and diagnostic utilities.

Authors:  Janice M Yoshizawa; Christopher A Schafer; Jason J Schafer; James J Farrell; Bruce J Paster; David T W Wong
Journal:  Clin Microbiol Rev       Date:  2013-10       Impact factor: 26.132

Review 2.  Great expectorations: the potential of salivary 'omic' approaches in neonatal intensive care.

Authors:  J Romano-Keeler; J L Wynn; J L Maron
Journal:  J Perinatol       Date:  2014-01-09       Impact factor: 2.521

3.  IER3 supports KRASG12D-dependent pancreatic cancer development by sustaining ERK1/2 phosphorylation.

Authors:  Maria Noé Garcia; Daniel Grasso; Maria Belen Lopez-Millan; Tewfik Hamidi; Celine Loncle; Richard Tomasini; Gwen Lomberk; Françoise Porteu; Raul Urrutia; Juan L Iovanna
Journal:  J Clin Invest       Date:  2014-09-24       Impact factor: 14.808

Review 4.  Extracellular RNA mediates and marks cancer progression.

Authors:  Jasmina S Redzic; Leonora Balaj; Kristan E van der Vos; Xandra O Breakefield
Journal:  Semin Cancer Biol       Date:  2014-04-28       Impact factor: 15.707

5.  Noninvasive saliva-based EGFR gene mutation detection in patients with lung cancer.

Authors:  Fang Wei; Chien-Chung Lin; Aron Joon; Ziding Feng; Gabriel Troche; Maruja E Lira; David Chia; Mao Mao; Chung-Liang Ho; Wu-Chou Su; David T W Wong
Journal:  Am J Respir Crit Care Med       Date:  2014-11-15       Impact factor: 21.405

6.  Novel approaches for bioinformatic analysis of salivary RNA sequencing data for development.

Authors:  Karolina Elzbieta Kaczor-Urbanowicz; Yong Kim; Feng Li; Timur Galeev; Rob R Kitchen; Mark Gerstein; Kikuye Koyano; Sung-Hee Jeong; Xiaoyan Wang; David Elashoff; So Young Kang; Su Mi Kim; Kyoung Kim; Sung Kim; David Chia; Xinshu Xiao; Joel Rozowsky; David T W Wong
Journal:  Bioinformatics       Date:  2018-01-01       Impact factor: 6.937

7.  Role of pancreatic cancer-derived exosomes in salivary biomarker development.

Authors:  Chang Lau; Yong Kim; David Chia; Nadine Spielmann; Guido Eibl; David Elashoff; Fang Wei; Yi-Ling Lin; Aune Moro; Tristan Grogan; Samantha Chiang; Eric Feinstein; Christopher Schafer; James Farrell; David T W Wong
Journal:  J Biol Chem       Date:  2013-07-23       Impact factor: 5.157

8.  Salivary biomarkers for cancer diagnosis: a meta-analysis.

Authors:  Óscar Rapado-González; Cristina Martínez-Reglero; Ángel Salgado-Barreira; Bahi Takkouche; Rafael López-López; María Mercedes Suárez-Cunqueiro; Laura Muinelo-Romay
Journal:  Ann Med       Date:  2020-04-11       Impact factor: 4.709

Review 9.  Saliva diagnostics - Current views and directions.

Authors:  Karolina Elżbieta Kaczor-Urbanowicz; Carmen Martin Carreras-Presas; Katri Aro; Michael Tu; Franklin Garcia-Godoy; David Tw Wong
Journal:  Exp Biol Med (Maywood)       Date:  2016-12-08

Review 10.  Immediate early response gene X-1, a potential prognostic biomarker in cancers.

Authors:  Mei X Wu; Irina V Ustyugova; Liping Han; Oleg E Akilov
Journal:  Expert Opin Ther Targets       Date:  2013-02-04       Impact factor: 6.902

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