| Literature DB >> 22091157 |
Ayyaz Mahmood1, Islam Ullah Khan, Muhammad Nadeem Arshad, Jamil Ahmed.
Abstract
In the title mol-ecule, C(8)H(10)N(5)O(2)S, the amino-(azido)-methyl and p-toluene-sulfonyl moieties are inclined almost at right angles with respect to each other, making a dihedral angle of 83.49 (6)°. An intra-molecular N-H⋯O hydrogen bond gives rise to the formation of six-membered ring with graph-set motif S(6). In the crystal, inter-molecular N-H⋯O hydrogen bonding is responsible for the formation of dimers about inversion centers, which are linked through another N-H⋯O inter-action along the b axis.Entities:
Year: 2011 PMID: 22091157 PMCID: PMC3213580 DOI: 10.1107/S1600536811026973
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H9N5O2S | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point: 444(2) K |
| Mo | |
| Cell parameters from 7120 reflections | |
| θ = 3.0–28.3° | |
| α = 92.244 (1)° | µ = 0.30 mm−1 |
| β = 93.615 (1)° | |
| γ = 110.505 (1)° | Needle, colourless |
| 0.34 × 0.17 × 0.17 mm |
| Bruker APEXII CCD diffractometer | 2343 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 28.3°, θmin = 3.2° |
| φ and ω scans | |
| 8664 measured reflections | |
| 2549 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2549 reflections | (Δ/σ)max = 0.004 |
| 152 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.77484 (4) | 0.16023 (4) | 0.12702 (3) | 0.02808 (11) | |
| O1 | 0.70020 (17) | 0.32207 (14) | 0.13239 (11) | 0.0459 (3) | |
| O2 | 0.87648 (15) | 0.13621 (15) | 0.02394 (8) | 0.0370 (2) | |
| N1 | 0.57940 (16) | −0.03376 (15) | 0.14825 (9) | 0.0291 (2) | |
| N2 | 0.7254 (2) | −0.27167 (18) | 0.08497 (12) | 0.0383 (3) | |
| H2N | 0.825 (3) | −0.194 (3) | 0.0593 (18) | 0.057* | |
| H3N | 0.710 (3) | −0.399 (3) | 0.0848 (18) | 0.057* | |
| N3 | 0.40903 (18) | −0.37488 (16) | 0.15282 (11) | 0.0368 (3) | |
| N4 | 0.27278 (18) | −0.32615 (17) | 0.19944 (11) | 0.0381 (3) | |
| N5 | 0.1395 (2) | −0.3067 (2) | 0.24161 (15) | 0.0586 (4) | |
| C1 | 1.3707 (4) | 0.2513 (3) | 0.55842 (19) | 0.0833 (8) | |
| H1A | 1.3230 | 0.1326 | 0.6002 | 0.125* | |
| H1B | 1.3738 | 0.3624 | 0.6088 | 0.125* | |
| H1C | 1.5079 | 0.2718 | 0.5354 | 0.125* | |
| C2 | 1.2249 (3) | 0.2310 (2) | 0.44945 (14) | 0.0514 (4) | |
| C3 | 1.0431 (3) | 0.2697 (3) | 0.45779 (14) | 0.0578 (5) | |
| H3 | 1.0116 | 0.3084 | 0.5309 | 0.069* | |
| C4 | 0.9072 (3) | 0.2521 (2) | 0.35961 (14) | 0.0468 (4) | |
| H4 | 0.7868 | 0.2807 | 0.3664 | 0.056* | |
| C5 | 0.95280 (19) | 0.19123 (17) | 0.25110 (11) | 0.0301 (3) | |
| C6 | 1.1336 (2) | 0.1525 (2) | 0.24079 (13) | 0.0391 (3) | |
| H6 | 1.1648 | 0.1128 | 0.1678 | 0.047* | |
| C7 | 1.2684 (3) | 0.1733 (3) | 0.34053 (15) | 0.0508 (4) | |
| H7 | 1.3904 | 0.1478 | 0.3335 | 0.061* | |
| C8 | 0.58221 (18) | −0.21318 (17) | 0.12696 (10) | 0.0275 (2) |
| S1 | 0.02984 (17) | 0.02068 (16) | 0.03386 (18) | 0.00862 (11) | 0.00265 (11) | 0.00626 (11) |
| O1 | 0.0493 (6) | 0.0259 (5) | 0.0674 (7) | 0.0189 (4) | 0.0042 (5) | 0.0108 (5) |
| O2 | 0.0366 (5) | 0.0402 (5) | 0.0313 (5) | 0.0090 (4) | 0.0053 (4) | 0.0083 (4) |
| N1 | 0.0278 (5) | 0.0233 (5) | 0.0357 (5) | 0.0081 (4) | 0.0037 (4) | 0.0035 (4) |
| N2 | 0.0397 (6) | 0.0250 (5) | 0.0526 (7) | 0.0129 (5) | 0.0117 (5) | 0.0047 (5) |
| N3 | 0.0366 (6) | 0.0243 (5) | 0.0458 (6) | 0.0054 (4) | 0.0072 (5) | 0.0039 (4) |
| N4 | 0.0360 (6) | 0.0283 (5) | 0.0438 (6) | 0.0028 (4) | 0.0057 (5) | 0.0077 (5) |
| N5 | 0.0480 (8) | 0.0493 (8) | 0.0766 (10) | 0.0108 (6) | 0.0250 (7) | 0.0119 (7) |
| C1 | 0.0957 (16) | 0.0691 (13) | 0.0535 (11) | −0.0045 (12) | −0.0346 (11) | 0.0146 (10) |
| C2 | 0.0585 (10) | 0.0377 (8) | 0.0402 (8) | −0.0029 (7) | −0.0128 (7) | 0.0082 (6) |
| C3 | 0.0735 (12) | 0.0533 (10) | 0.0311 (7) | 0.0038 (8) | 0.0057 (7) | −0.0045 (7) |
| C4 | 0.0470 (8) | 0.0470 (8) | 0.0410 (8) | 0.0101 (7) | 0.0089 (6) | −0.0059 (6) |
| C5 | 0.0334 (6) | 0.0212 (5) | 0.0317 (6) | 0.0045 (4) | 0.0024 (5) | 0.0021 (4) |
| C6 | 0.0391 (7) | 0.0417 (7) | 0.0366 (7) | 0.0153 (6) | −0.0015 (5) | −0.0002 (6) |
| C7 | 0.0441 (8) | 0.0537 (9) | 0.0513 (9) | 0.0154 (7) | −0.0110 (7) | 0.0039 (7) |
| C8 | 0.0301 (6) | 0.0233 (5) | 0.0271 (5) | 0.0073 (4) | −0.0009 (4) | 0.0036 (4) |
| S1—O1 | 1.4324 (10) | C1—H1B | 0.9600 |
| S1—O2 | 1.4387 (10) | C1—H1C | 0.9600 |
| S1—N1 | 1.6064 (10) | C2—C7 | 1.376 (3) |
| S1—C5 | 1.7648 (13) | C2—C3 | 1.385 (3) |
| N1—C8 | 1.3147 (15) | C3—C4 | 1.384 (3) |
| N2—C8 | 1.3104 (17) | C3—H3 | 0.9300 |
| N2—H2N | 0.80 (2) | C4—C5 | 1.385 (2) |
| N2—H3N | 0.89 (2) | C4—H4 | 0.9300 |
| N3—N4 | 1.2523 (17) | C5—C6 | 1.381 (2) |
| N3—C8 | 1.4034 (15) | C6—C7 | 1.389 (2) |
| N4—N5 | 1.112 (2) | C6—H6 | 0.9300 |
| C1—C2 | 1.515 (2) | C7—H7 | 0.9300 |
| C1—H1A | 0.9600 | ||
| O1—S1—O2 | 117.13 (6) | C3—C2—C1 | 120.33 (19) |
| O1—S1—N1 | 105.65 (6) | C4—C3—C2 | 121.43 (15) |
| O2—S1—N1 | 112.85 (6) | C4—C3—H3 | 119.3 |
| O1—S1—C5 | 107.75 (6) | C2—C3—H3 | 119.3 |
| O2—S1—C5 | 107.55 (6) | C3—C4—C5 | 119.15 (16) |
| N1—S1—C5 | 105.20 (6) | C3—C4—H4 | 120.4 |
| C8—N1—S1 | 121.49 (9) | C5—C4—H4 | 120.4 |
| C8—N2—H2N | 120.4 (15) | C6—C5—C4 | 120.34 (13) |
| C8—N2—H3N | 119.0 (13) | C6—C5—S1 | 120.58 (10) |
| H2N—N2—H3N | 120.6 (19) | C4—C5—S1 | 119.08 (11) |
| N4—N3—C8 | 113.81 (11) | C5—C6—C7 | 119.34 (14) |
| N5—N4—N3 | 171.56 (14) | C5—C6—H6 | 120.3 |
| C2—C1—H1A | 109.5 | C7—C6—H6 | 120.3 |
| C2—C1—H1B | 109.5 | C2—C7—C6 | 121.31 (16) |
| H1A—C1—H1B | 109.5 | C2—C7—H7 | 119.3 |
| C2—C1—H1C | 109.5 | C6—C7—H7 | 119.3 |
| H1A—C1—H1C | 109.5 | N2—C8—N1 | 130.52 (12) |
| H1B—C1—H1C | 109.5 | N2—C8—N3 | 111.45 (11) |
| C7—C2—C3 | 118.41 (15) | N1—C8—N3 | 118.03 (11) |
| C7—C2—C1 | 121.3 (2) | ||
| O1—S1—N1—C8 | 166.90 (10) | O1—S1—C5—C4 | 41.58 (13) |
| O2—S1—N1—C8 | 37.71 (12) | O2—S1—C5—C4 | 168.70 (11) |
| C5—S1—N1—C8 | −79.26 (11) | N1—S1—C5—C4 | −70.78 (12) |
| C8—N3—N4—N5 | −177.3 (11) | C4—C5—C6—C7 | 0.6 (2) |
| C7—C2—C3—C4 | −0.2 (3) | S1—C5—C6—C7 | −178.38 (12) |
| C1—C2—C3—C4 | −179.94 (16) | C3—C2—C7—C6 | −0.5 (3) |
| C2—C3—C4—C5 | 1.0 (3) | C1—C2—C7—C6 | 179.26 (16) |
| C3—C4—C5—C6 | −1.2 (2) | C5—C6—C7—C2 | 0.3 (2) |
| C3—C4—C5—S1 | 177.75 (12) | S1—N1—C8—N2 | −2.0 (2) |
| O1—S1—C5—C6 | −139.43 (11) | S1—N1—C8—N3 | 177.16 (9) |
| O2—S1—C5—C6 | −12.31 (13) | N4—N3—C8—N2 | 176.19 (12) |
| N1—S1—C5—C6 | 108.21 (11) | N4—N3—C8—N1 | −3.12 (18) |
| H··· | ||||
| N2—H2N···O2i | 0.80 (2) | 2.24 (2) | 2.9459 (16) | 148 (2) |
| N2—H3N···O1ii | 0.89 (2) | 2.08 (2) | 2.9481 (15) | 164 (2) |
| N2—H2N···O2 | 0.80 (2) | 2.34 (2) | 2.8862 (16) | 127 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.80 (2) | 2.24 (2) | 2.9459 (16) | 148 (2) |
| N2—H3 | 0.89 (2) | 2.08 (2) | 2.9481 (15) | 164 (2) |
| N2—H2 | 0.80 (2) | 2.34 (2) | 2.8862 (16) | 127 (2) |
Symmetry codes: (i) ; (ii) .