| Literature DB >> 22091100 |
Muhammad Shafiq, Islam Ullah Khan, Muhammad Zia-Ur-Rehman, Muhammad Nadeem Arshad, Abdullah M Asiri.
Abstract
In the title mol-ecule, C(9)H(10)BrN(3)O(2)S, the thia-zine ring has an envelope conformation with the S atom at the flap. The geometry around the S atom is distorted tetra-hedral. In the crystal, inversion dimers linked by pairs of N-H⋯N hydrogen bonds occur, generating R(2) (2)(6) ring motifs. N-H⋯O hydrogen bonds and C-H⋯O inter-actions connect the dimers, forming a three-dimentional network structure.Entities:
Year: 2011 PMID: 22091100 PMCID: PMC3213521 DOI: 10.1107/S1600536811027930
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H10BrN3O2S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3531 reflections |
| θ = 2.7–24.7° | |
| µ = 3.93 mm−1 | |
| β = 92.278 (2)° | Needle, yellow |
| 0.21 × 0.09 × 0.07 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2719 independent reflections |
| Radiation source: fine-focus sealed tube | 1972 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 12176 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2719 reflections | (Δ/σ)max = 0.001 |
| 152 parameters | Δρmax = 0.40 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Br1 | 0.94817 (3) | 0.62148 (3) | 1.15166 (3) | 0.04753 (12) | |
| S1 | 0.86913 (6) | 1.05109 (6) | 0.65175 (5) | 0.03060 (16) | |
| O1 | 0.81377 (18) | 0.92236 (19) | 0.60884 (16) | 0.0413 (4) | |
| O2 | 0.90132 (19) | 1.15392 (19) | 0.56664 (16) | 0.0433 (5) | |
| N1 | 1.00013 (19) | 1.0224 (2) | 0.73776 (18) | 0.0321 (5) | |
| N2 | 0.6567 (2) | 1.0222 (2) | 0.9307 (2) | 0.0400 (5) | |
| N3 | 0.5556 (3) | 1.1148 (3) | 0.9019 (3) | 0.0551 (7) | |
| H32 | 0.507 (4) | 1.115 (3) | 0.962 (3) | 0.066* | |
| H31 | 0.586 (3) | 1.199 (4) | 0.881 (3) | 0.066* | |
| C1 | 0.9838 (2) | 0.9263 (2) | 0.8314 (2) | 0.0290 (5) | |
| C2 | 1.0852 (3) | 0.8338 (3) | 0.8633 (2) | 0.0363 (6) | |
| H2 | 1.1616 | 0.8335 | 0.8202 | 0.044* | |
| C3 | 1.0743 (3) | 0.7436 (3) | 0.9567 (2) | 0.0377 (6) | |
| H3 | 1.1427 | 0.6829 | 0.9774 | 0.045* | |
| C4 | 0.9602 (3) | 0.7443 (2) | 1.0195 (2) | 0.0341 (6) | |
| C5 | 0.8576 (2) | 0.8322 (2) | 0.9895 (2) | 0.0319 (6) | |
| H5 | 0.7813 | 0.8299 | 1.0328 | 0.038* | |
| C6 | 0.8669 (2) | 0.9253 (2) | 0.8943 (2) | 0.0274 (5) | |
| C7 | 0.7567 (2) | 1.0212 (2) | 0.8646 (2) | 0.0290 (5) | |
| C8 | 0.7637 (3) | 1.1175 (2) | 0.7582 (2) | 0.0343 (6) | |
| H8A | 0.7954 | 1.2077 | 0.7848 | 0.041* | |
| H8B | 0.6761 | 1.1295 | 0.7219 | 0.041* | |
| C9 | 1.1299 (3) | 1.0488 (3) | 0.6900 (3) | 0.0457 (7) | |
| H9A | 1.1927 | 1.0658 | 0.7546 | 0.069* | |
| H9B | 1.1250 | 1.1284 | 0.6385 | 0.069* | |
| H9C | 1.1571 | 0.9694 | 0.6454 | 0.069* |
| Br1 | 0.04682 (19) | 0.04001 (17) | 0.0552 (2) | −0.00435 (13) | −0.00552 (14) | 0.01513 (13) |
| S1 | 0.0277 (3) | 0.0349 (3) | 0.0292 (3) | 0.0003 (3) | 0.0004 (3) | 0.0005 (2) |
| O1 | 0.0432 (11) | 0.0436 (10) | 0.0366 (10) | −0.0068 (9) | −0.0041 (8) | −0.0078 (8) |
| O2 | 0.0411 (11) | 0.0484 (11) | 0.0406 (11) | 0.0029 (9) | 0.0046 (9) | 0.0129 (8) |
| N1 | 0.0234 (11) | 0.0400 (11) | 0.0330 (12) | −0.0015 (9) | 0.0008 (9) | 0.0032 (9) |
| N2 | 0.0375 (13) | 0.0384 (12) | 0.0447 (14) | 0.0089 (10) | 0.0113 (11) | 0.0073 (10) |
| N3 | 0.0439 (16) | 0.0518 (16) | 0.071 (2) | 0.0180 (13) | 0.0243 (14) | 0.0177 (14) |
| C1 | 0.0265 (13) | 0.0311 (12) | 0.0290 (13) | −0.0005 (10) | −0.0034 (10) | −0.0058 (10) |
| C2 | 0.0283 (14) | 0.0411 (14) | 0.0394 (16) | 0.0041 (11) | 0.0000 (12) | −0.0047 (11) |
| C3 | 0.0337 (15) | 0.0352 (13) | 0.0436 (16) | 0.0073 (11) | −0.0062 (12) | −0.0033 (11) |
| C4 | 0.0395 (15) | 0.0257 (11) | 0.0362 (14) | −0.0052 (10) | −0.0086 (12) | −0.0002 (10) |
| C5 | 0.0300 (14) | 0.0319 (12) | 0.0335 (14) | −0.0037 (10) | −0.0015 (11) | −0.0033 (10) |
| C6 | 0.0283 (13) | 0.0259 (11) | 0.0279 (13) | −0.0023 (10) | −0.0021 (10) | −0.0050 (9) |
| C7 | 0.0276 (13) | 0.0293 (12) | 0.0302 (13) | −0.0001 (10) | 0.0022 (10) | −0.0035 (10) |
| C8 | 0.0322 (14) | 0.0348 (13) | 0.0360 (14) | 0.0045 (11) | 0.0028 (11) | 0.0017 (11) |
| C9 | 0.0265 (14) | 0.0676 (19) | 0.0432 (16) | −0.0013 (13) | 0.0049 (12) | 0.0035 (14) |
| Br1—C4 | 1.904 (2) | C2—H2 | 0.9300 |
| S1—O2 | 1.4228 (19) | C3—C4 | 1.380 (4) |
| S1—O1 | 1.4369 (19) | C3—H3 | 0.9300 |
| S1—N1 | 1.635 (2) | C4—C5 | 1.374 (3) |
| S1—C8 | 1.755 (3) | C5—C6 | 1.400 (3) |
| N1—C1 | 1.415 (3) | C5—H5 | 0.9300 |
| N1—C9 | 1.464 (3) | C6—C7 | 1.479 (3) |
| N2—C7 | 1.280 (3) | C7—C8 | 1.515 (3) |
| N2—N3 | 1.388 (3) | C8—H8A | 0.9700 |
| N3—H32 | 0.85 (4) | C8—H8B | 0.9700 |
| N3—H31 | 0.90 (4) | C9—H9A | 0.9600 |
| C1—C2 | 1.397 (4) | C9—H9B | 0.9600 |
| C1—C6 | 1.404 (3) | C9—H9C | 0.9600 |
| C2—C3 | 1.369 (4) | ||
| O2—S1—O1 | 118.29 (11) | C5—C4—Br1 | 120.2 (2) |
| O2—S1—N1 | 108.09 (11) | C3—C4—Br1 | 118.40 (19) |
| O1—S1—N1 | 110.45 (11) | C4—C5—C6 | 120.6 (2) |
| O2—S1—C8 | 111.38 (11) | C4—C5—H5 | 119.7 |
| O1—S1—C8 | 107.55 (12) | C6—C5—H5 | 119.7 |
| N1—S1—C8 | 99.44 (11) | C5—C6—C1 | 118.1 (2) |
| C1—N1—C9 | 121.3 (2) | C5—C6—C7 | 120.0 (2) |
| C1—N1—S1 | 115.59 (16) | C1—C6—C7 | 121.9 (2) |
| C9—N1—S1 | 118.49 (17) | N2—C7—C6 | 118.9 (2) |
| C7—N2—N3 | 117.8 (2) | N2—C7—C8 | 120.9 (2) |
| N2—N3—H32 | 105 (2) | C6—C7—C8 | 120.1 (2) |
| N2—N3—H31 | 112 (2) | C7—C8—S1 | 111.17 (16) |
| H32—N3—H31 | 115 (3) | C7—C8—H8A | 109.4 |
| C2—C1—C6 | 119.7 (2) | S1—C8—H8A | 109.4 |
| C2—C1—N1 | 120.0 (2) | C7—C8—H8B | 109.4 |
| C6—C1—N1 | 120.2 (2) | S1—C8—H8B | 109.4 |
| C3—C2—C1 | 121.4 (2) | H8A—C8—H8B | 108.0 |
| C3—C2—H2 | 119.3 | N1—C9—H9A | 109.5 |
| C1—C2—H2 | 119.3 | N1—C9—H9B | 109.5 |
| C2—C3—C4 | 118.8 (2) | H9A—C9—H9B | 109.5 |
| C2—C3—H3 | 120.6 | N1—C9—H9C | 109.5 |
| C4—C3—H3 | 120.6 | H9A—C9—H9C | 109.5 |
| C5—C4—C3 | 121.4 (2) | H9B—C9—H9C | 109.5 |
| O2—S1—N1—C1 | 177.43 (17) | C4—C5—C6—C1 | −0.3 (3) |
| O1—S1—N1—C1 | −51.7 (2) | C4—C5—C6—C7 | −178.8 (2) |
| C8—S1—N1—C1 | 61.13 (19) | C2—C1—C6—C5 | 1.4 (3) |
| O2—S1—N1—C9 | −26.3 (2) | N1—C1—C6—C5 | −177.3 (2) |
| O1—S1—N1—C9 | 104.5 (2) | C2—C1—C6—C7 | 179.8 (2) |
| C8—S1—N1—C9 | −142.6 (2) | N1—C1—C6—C7 | 1.1 (3) |
| C9—N1—C1—C2 | −13.4 (3) | N3—N2—C7—C6 | 179.0 (2) |
| S1—N1—C1—C2 | 142.1 (2) | N3—N2—C7—C8 | −0.3 (4) |
| C9—N1—C1—C6 | 165.3 (2) | C5—C6—C7—N2 | 3.4 (3) |
| S1—N1—C1—C6 | −39.2 (3) | C1—C6—C7—N2 | −174.9 (2) |
| C6—C1—C2—C3 | −1.4 (4) | C5—C6—C7—C8 | −177.2 (2) |
| N1—C1—C2—C3 | 177.3 (2) | C1—C6—C7—C8 | 4.4 (3) |
| C1—C2—C3—C4 | 0.4 (4) | N2—C7—C8—S1 | −155.8 (2) |
| C2—C3—C4—C5 | 0.6 (4) | C6—C7—C8—S1 | 24.9 (3) |
| C2—C3—C4—Br1 | −178.47 (19) | O2—S1—C8—C7 | −165.88 (17) |
| C3—C4—C5—C6 | −0.7 (4) | O1—S1—C8—C7 | 63.0 (2) |
| Br1—C4—C5—C6 | 178.42 (17) | N1—S1—C8—C7 | −52.11 (19) |
| H··· | ||||
| N3—H32···N2i | 0.85 (4) | 2.47 (4) | 3.198 (4) | 144 (3) |
| N3—H31···O1ii | 0.90 (4) | 2.38 (4) | 3.252 (4) | 162 (3) |
| C3—H3···O1iii | 0.93 | 2.45 | 3.323 (3) | 156. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N3—H32⋯N2i | 0.85 (4) | 2.47 (4) | 3.198 (4) | 144 (3) |
| N3—H31⋯O1ii | 0.90 (4) | 2.38 (4) | 3.252 (4) | 162 (3) |
| C3—H3⋯O1iii | 0.93 | 2.45 | 3.323 (3) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) .