Literature DB >> 22091079

3-Cyclo-hexyl-sulfonyl-5-iodo-2,7-dimethyl-1-benzofuran.

Pil Ja Seo, Hong Dae Choi, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(16)H(19)IO(3)S, the cyclo-hexyl ring adopts a chair conformation. In the crystal, pairs of inter-molecular I⋯O contacts [3.269 (2) Å] link the mol-ecules into inversion dimers. These dimers are further stabilized by a slipped π-π inter-action between the benzene and furan rings of adjacent mol-ecules [centroid-centroid distance = 3.701 (3) Å, inter-planar distance = 3.372 (3) Å and slippage = 1.525 (3) Å].

Entities:  

Year:  2011        PMID: 22091079      PMCID: PMC3213500          DOI: 10.1107/S1600536811027395

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For structural studies of related 3-cyclo­hexyl­sulfonyl-5-halo-2-methyl-1-benzofuran derivatives, see: Choi et al. (2011 ▶). For a review on halogen bonding, see: Politzer et al. (2007 ▶).

Experimental

Crystal data

C16H19IO3S M = 418.27 Triclinic, a = 6.8643 (2) Å b = 8.4981 (2) Å c = 14.2323 (3) Å α = 102.512 (1)° β = 99.846 (1)° γ = 92.092 (1)° V = 796.23 (3) Å3 Z = 2 Mo Kα radiation μ = 2.15 mm−1 T = 173 K 0.24 × 0.16 × 0.14 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.629, T max = 0.759 15021 measured reflections 3997 independent reflections 3753 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.058 S = 1.06 3997 reflections 192 parameters H-atom parameters constrained Δρmax = 0.68 e Å−3 Δρmin = −0.63 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811027395/zl2384sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811027395/zl2384Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811027395/zl2384Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H19IO3SZ = 2
Mr = 418.27F(000) = 416
Triclinic, P1Dx = 1.745 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.8643 (2) ÅCell parameters from 8926 reflections
b = 8.4981 (2) Åθ = 2.5–28.4°
c = 14.2323 (3) ŵ = 2.15 mm1
α = 102.512 (1)°T = 173 K
β = 99.846 (1)°Block, colourless
γ = 92.092 (1)°0.24 × 0.16 × 0.14 mm
V = 796.23 (3) Å3
Bruker SMART APEXII CCD diffractometer3997 independent reflections
Radiation source: rotating anode3753 reflections with I > 2σ(I)
graphite multilayerRint = 0.035
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 1.5°
φ and ω scansh = −7→9
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −11→11
Tmin = 0.629, Tmax = 0.759l = −19→18
15021 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.023Hydrogen site location: difference Fourier map
wR(F2) = 0.058H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0291P)2 + 0.2895P] where P = (Fo2 + 2Fc2)/3
3997 reflections(Δ/σ)max = 0.003
192 parametersΔρmax = 0.68 e Å3
0 restraintsΔρmin = −0.63 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.227778 (18)0.565947 (15)0.643317 (9)0.02648 (5)
S10.19017 (7)0.68116 (6)0.21668 (4)0.02476 (10)
O10.6820 (2)0.89122 (16)0.38987 (10)0.0237 (3)
O20.0181 (2)0.67742 (19)0.26177 (12)0.0329 (3)
O30.1832 (3)0.76329 (19)0.13777 (12)0.0350 (4)
C10.3897 (3)0.7652 (2)0.30960 (14)0.0224 (4)
C20.4132 (3)0.7461 (2)0.40933 (14)0.0211 (4)
C30.3023 (3)0.6713 (2)0.46236 (14)0.0234 (4)
H30.17610.61630.43360.028*
C40.3852 (3)0.6808 (2)0.55982 (14)0.0229 (4)
C50.5707 (3)0.7612 (2)0.60332 (14)0.0231 (4)
H50.62070.76420.67020.028*
C60.6829 (3)0.8363 (2)0.55159 (15)0.0225 (4)
C70.5962 (3)0.8262 (2)0.45489 (14)0.0211 (4)
C80.5545 (3)0.8523 (2)0.30207 (14)0.0238 (4)
C90.8856 (3)0.9191 (3)0.59487 (16)0.0278 (4)
H9A0.91510.92140.66500.042*
H9B0.88921.03000.58550.042*
H9C0.98460.86000.56230.042*
C100.6225 (3)0.9118 (3)0.22258 (16)0.0311 (4)
H10A0.64781.02970.24210.047*
H10B0.52010.88270.16330.047*
H10C0.74490.86280.20940.047*
C110.2463 (3)0.4764 (2)0.17566 (14)0.0252 (4)
H110.29520.43370.23490.030*
C120.0574 (3)0.3736 (3)0.11981 (17)0.0342 (5)
H12A−0.04380.38060.16220.041*
H12B0.00300.41450.06140.041*
C130.1052 (4)0.1980 (3)0.0884 (2)0.0461 (6)
H13A0.14850.15500.14730.055*
H13B−0.01600.13240.05000.055*
C140.2662 (4)0.1825 (3)0.0274 (2)0.0446 (6)
H14A0.21800.2151−0.03460.054*
H14B0.29790.06810.01120.054*
C150.4538 (4)0.2879 (3)0.08190 (18)0.0365 (5)
H15A0.55300.28110.03850.044*
H15B0.51110.24700.13990.044*
C160.4094 (3)0.4643 (3)0.11478 (16)0.0303 (4)
H16A0.53100.52830.15410.036*
H16B0.36720.50960.05670.036*
U11U22U33U12U13U23
I10.02413 (8)0.02921 (8)0.02755 (8)0.00073 (5)0.00534 (5)0.00927 (5)
S10.0237 (2)0.0259 (2)0.0223 (2)0.00194 (18)−0.00089 (18)0.00417 (18)
O10.0210 (7)0.0248 (7)0.0242 (7)−0.0001 (5)0.0038 (5)0.0039 (5)
O20.0221 (7)0.0389 (9)0.0338 (8)0.0025 (6)0.0019 (6)0.0022 (6)
O30.0392 (9)0.0337 (8)0.0312 (8)0.0025 (7)−0.0044 (7)0.0138 (6)
C10.0218 (9)0.0223 (9)0.0211 (9)0.0025 (7)0.0017 (7)0.0024 (7)
C20.0201 (9)0.0189 (8)0.0227 (9)0.0030 (7)0.0030 (7)0.0020 (7)
C30.0197 (9)0.0227 (9)0.0256 (9)−0.0006 (7)0.0022 (7)0.0024 (7)
C40.0226 (9)0.0216 (9)0.0254 (9)0.0019 (7)0.0064 (7)0.0054 (7)
C50.0224 (9)0.0237 (9)0.0224 (9)0.0041 (7)0.0017 (7)0.0046 (7)
C60.0204 (9)0.0183 (8)0.0257 (9)0.0030 (7)0.0009 (7)0.0010 (7)
C70.0206 (9)0.0189 (8)0.0239 (9)0.0021 (7)0.0056 (7)0.0039 (7)
C80.0249 (9)0.0223 (9)0.0230 (9)0.0046 (7)0.0025 (7)0.0036 (7)
C90.0202 (9)0.0300 (10)0.0302 (10)−0.0015 (8)−0.0014 (8)0.0054 (8)
C100.0329 (11)0.0346 (11)0.0277 (10)0.0014 (9)0.0071 (9)0.0100 (8)
C110.0289 (10)0.0245 (9)0.0203 (9)−0.0009 (8)0.0019 (8)0.0036 (7)
C120.0302 (11)0.0368 (12)0.0294 (11)−0.0073 (9)0.0045 (9)−0.0034 (9)
C130.0499 (16)0.0352 (13)0.0436 (14)−0.0134 (11)0.0089 (12)−0.0092 (10)
C140.0479 (15)0.0363 (13)0.0398 (13)−0.0014 (11)0.0066 (11)−0.0106 (10)
C150.0369 (13)0.0331 (12)0.0353 (12)0.0053 (9)0.0057 (10)−0.0009 (9)
C160.0304 (11)0.0312 (11)0.0286 (10)0.0011 (8)0.0068 (9)0.0047 (8)
I1—C42.097 (2)C9—H9C0.9800
I1—O2i3.2688 (17)C10—H10A0.9800
S1—O21.4401 (17)C10—H10B0.9800
S1—O31.4403 (16)C10—H10C0.9800
S1—C11.742 (2)C11—C161.522 (3)
S1—C111.790 (2)C11—C121.530 (3)
O1—C81.365 (2)C11—H111.0000
O1—C71.376 (2)C12—C131.527 (3)
C1—C81.361 (3)C12—H12A0.9900
C1—C21.446 (3)C12—H12B0.9900
C2—C31.386 (3)C13—C141.510 (4)
C2—C71.389 (3)C13—H13A0.9900
C3—C41.390 (3)C13—H13B0.9900
C3—H30.9500C14—C151.528 (3)
C4—C51.398 (3)C14—H14A0.9900
C5—C61.380 (3)C14—H14B0.9900
C5—H50.9500C15—C161.529 (3)
C6—C71.386 (3)C15—H15A0.9900
C6—C91.503 (3)C15—H15B0.9900
C8—C101.472 (3)C16—H16A0.9900
C9—H9A0.9800C16—H16B0.9900
C9—H9B0.9800
C4—I1—O2i168.48 (6)H10A—C10—H10B109.5
O2—S1—O3118.27 (10)C8—C10—H10C109.5
O2—S1—C1107.00 (9)H10A—C10—H10C109.5
O3—S1—C1109.53 (10)H10B—C10—H10C109.5
O2—S1—C11107.41 (10)C16—C11—C12111.79 (17)
O3—S1—C11109.40 (10)C16—C11—S1111.94 (14)
C1—S1—C11104.32 (9)C12—C11—S1109.81 (15)
C8—O1—C7107.13 (15)C16—C11—H11107.7
C8—C1—C2107.46 (17)C12—C11—H11107.7
C8—C1—S1127.49 (16)S1—C11—H11107.7
C2—C1—S1124.98 (15)C13—C12—C11109.4 (2)
C3—C2—C7119.59 (18)C13—C12—H12A109.8
C3—C2—C1135.79 (18)C11—C12—H12A109.8
C7—C2—C1104.61 (17)C13—C12—H12B109.8
C2—C3—C4116.60 (18)C11—C12—H12B109.8
C2—C3—H3121.7H12A—C12—H12B108.2
C4—C3—H3121.7C14—C13—C12111.6 (2)
C3—C4—C5122.42 (19)C14—C13—H13A109.3
C3—C4—I1118.52 (14)C12—C13—H13A109.3
C5—C4—I1119.05 (14)C14—C13—H13B109.3
C6—C5—C4121.71 (18)C12—C13—H13B109.3
C6—C5—H5119.1H13A—C13—H13B108.0
C4—C5—H5119.1C13—C14—C15111.3 (2)
C5—C6—C7114.71 (17)C13—C14—H14A109.4
C5—C6—C9123.24 (19)C15—C14—H14A109.4
C7—C6—C9122.03 (19)C13—C14—H14B109.4
O1—C7—C6124.57 (17)C15—C14—H14B109.4
O1—C7—C2110.47 (16)H14A—C14—H14B108.0
C6—C7—C2124.95 (19)C14—C15—C16111.3 (2)
C1—C8—O1110.33 (17)C14—C15—H15A109.4
C1—C8—C10134.78 (19)C16—C15—H15A109.4
O1—C8—C10114.89 (18)C14—C15—H15B109.4
C6—C9—H9A109.5C16—C15—H15B109.4
C6—C9—H9B109.5H15A—C15—H15B108.0
H9A—C9—H9B109.5C11—C16—C15110.27 (19)
C6—C9—H9C109.5C11—C16—H16A109.6
H9A—C9—H9C109.5C15—C16—H16A109.6
H9B—C9—H9C109.5C11—C16—H16B109.6
C8—C10—H10A109.5C15—C16—H16B109.6
C8—C10—H10B109.5H16A—C16—H16B108.1
O2—S1—C1—C8−150.57 (18)C9—C6—C7—C2177.36 (18)
O3—S1—C1—C8−21.2 (2)C3—C2—C7—O1179.81 (16)
C11—S1—C1—C895.78 (19)C1—C2—C7—O10.2 (2)
O2—S1—C1—C232.94 (19)C3—C2—C7—C61.2 (3)
O3—S1—C1—C2162.28 (16)C1—C2—C7—C6−178.46 (18)
C11—S1—C1—C2−80.70 (18)C2—C1—C8—O1−0.2 (2)
C8—C1—C2—C3−179.5 (2)S1—C1—C8—O1−177.21 (14)
S1—C1—C2—C3−2.4 (3)C2—C1—C8—C10179.9 (2)
C8—C1—C2—C70.0 (2)S1—C1—C8—C102.9 (4)
S1—C1—C2—C7177.11 (14)C7—O1—C8—C10.3 (2)
C7—C2—C3—C4−0.5 (3)C7—O1—C8—C10−179.77 (16)
C1—C2—C3—C4179.0 (2)O2—S1—C11—C16172.45 (14)
C2—C3—C4—C50.0 (3)O3—S1—C11—C1642.91 (17)
C2—C3—C4—I1−178.70 (13)C1—S1—C11—C16−74.20 (16)
O2i—I1—C4—C354.4 (4)O2—S1—C11—C1247.67 (17)
O2i—I1—C4—C5−124.3 (3)O3—S1—C11—C12−81.87 (17)
C3—C4—C5—C60.0 (3)C1—S1—C11—C12161.02 (15)
I1—C4—C5—C6178.69 (14)C16—C11—C12—C1357.2 (3)
C4—C5—C6—C70.5 (3)S1—C11—C12—C13−177.91 (17)
C4—C5—C6—C9−177.95 (18)C11—C12—C13—C14−56.7 (3)
C8—O1—C7—C6178.33 (18)C12—C13—C14—C1556.3 (3)
C8—O1—C7—C2−0.3 (2)C13—C14—C15—C16−55.2 (3)
C5—C6—C7—O1−179.56 (17)C12—C11—C16—C15−56.8 (2)
C9—C6—C7—O1−1.1 (3)S1—C11—C16—C15179.57 (15)
C5—C6—C7—C2−1.1 (3)C14—C15—C16—C1155.0 (3)
  10 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  An overview of halogen bonding.

Authors:  Peter Politzer; Pat Lane; Monica C Concha; Yuguang Ma; Jane S Murray
Journal:  J Mol Model       Date:  2006-09-30       Impact factor: 1.810

5.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

8.  3-Cyclo-hexyl-sulfonyl-5-fluoro-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12

9.  5-Chloro-3-cyclo-hexyl-sulfonyl-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-09

10.  5-Bromo-3-cyclo-hexyl-sulfonyl-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-02
  10 in total

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