Literature DB >> 22091062

1-Phenyl-isatin.

Deepak Shukla1, Manju Rajeswaran.   

Abstract

In the title compound, C(14)H(9)NO(2), the phenyl ring makes a dihedral angle of 50.59 (5)° with the mean plane of the isatin fragment. In the crystal, mol-ecules are linked through weak inter-molecular C-H⋯O hydrogen bonds. The crystal structure also exhibits two slipped π-π inter-actions between the benzene rings of neighbouring mol-ecules [centroid-centroid distance = 3.968 (3) Å, inter-planar distance = 3.484 (3) Å and slippage = 1.899 (3) Å], and between the phenyl rings of neighbouring mol-ecules [centroid-centroid distance = 3.968 (3) Å, inter-planar distance = 3.638 (3) Å and slippage = 1.584 (3) Å].

Entities:  

Year:  2011        PMID: 22091062      PMCID: PMC3213483          DOI: 10.1107/S1600536811027334

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological properties of isatin derivatives, see: Prakash et al. (2010 ▶). For CC bond lengths in dikotone moieties, see: Rathna & Chandrasekhar, (1991 ▶).

Experimental

Crystal data

C14H9NO2 M = 223.22 Orthorhombic, a = 3.9677 (1) Å b = 13.3259 (4) Å c = 20.3397 (7) Å V = 1075.42 (6) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.37 × 0.30 × 0.15 mm

Data collection

Nonius KappaCCD diffractometer 7556 measured reflections 1462 independent reflections 1085 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.081 S = 1.06 1462 reflections 155 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.12 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL, Mercury (Allen et al., 2004 ▶) and DIAMOND (Brandenburg, 1998 ▶)’; software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811027334/lx2190sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811027334/lx2190Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811027334/lx2190Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H9NO2F(000) = 464
Mr = 223.22Dx = 1.379 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4093 reflections
a = 3.9677 (1) Åθ = 1.0–27.5°
b = 13.3259 (4) ŵ = 0.09 mm1
c = 20.3397 (7) ÅT = 293 K
V = 1075.42 (6) Å3Rods, orange
Z = 40.37 × 0.30 × 0.15 mm
Nonius KappaCCD diffractometer1085 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.051
graphiteθmax = 27.4°, θmin = 4.3°
Detector resolution: 9 pixels mm-1h = −5→4
φ and ω scansk = −15→17
7556 measured reflectionsl = −26→25
1462 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.081w = 1/[σ2(Fo2) + (0.0318P)2 + 0.1048P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
1462 reflectionsΔρmax = 0.16 e Å3
155 parametersΔρmin = −0.12 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.017 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.3503 (5)0.20706 (10)0.76634 (7)0.0522 (4)
O10.0729 (4)0.36020 (10)0.75768 (7)0.0685 (4)
O20.0940 (5)0.34979 (11)0.90098 (7)0.0861 (6)
C10.1973 (6)0.29305 (13)0.78955 (9)0.0544 (5)
C20.2117 (6)0.28662 (15)0.86534 (9)0.0589 (6)
C30.3830 (6)0.19284 (13)0.87981 (9)0.0550 (5)
C40.4654 (6)0.14811 (16)0.93889 (10)0.0670 (6)
H40.40990.17860.97860.080*
C50.6316 (7)0.05730 (16)0.93787 (11)0.0714 (7)
H50.68910.02580.97710.086*
C60.7124 (7)0.01328 (16)0.87866 (11)0.0672 (6)
H60.8264−0.04770.87890.081*
C70.6296 (6)0.05666 (13)0.81841 (10)0.0572 (5)
H70.68490.02580.77880.069*
C80.4628 (5)0.14699 (13)0.82012 (8)0.0497 (5)
C90.3944 (5)0.18304 (13)0.69803 (8)0.0502 (5)
C100.2965 (6)0.09053 (14)0.67389 (10)0.0591 (6)
H100.20210.04280.70170.071*
C110.3406 (7)0.06987 (17)0.60815 (10)0.0697 (6)
H110.27960.00740.59160.084*
C120.4738 (7)0.14081 (19)0.56704 (11)0.0746 (7)
H120.50120.12640.52260.090*
C130.5670 (7)0.23267 (17)0.59071 (10)0.0706 (7)
H130.65570.28060.56230.085*
C140.5300 (6)0.25464 (15)0.65666 (10)0.0580 (6)
H140.59560.31680.67300.070*
U11U22U33U12U13U23
N10.0648 (11)0.0426 (8)0.0491 (8)0.0002 (9)0.0042 (8)0.0007 (7)
O10.0824 (11)0.0514 (7)0.0717 (9)0.0092 (9)−0.0031 (9)0.0038 (7)
O20.1197 (16)0.0691 (9)0.0694 (9)0.0189 (12)0.0108 (11)−0.0142 (8)
C10.0609 (13)0.0437 (9)0.0585 (11)−0.0030 (10)0.0017 (10)−0.0003 (9)
C20.0685 (15)0.0513 (10)0.0570 (11)−0.0023 (12)0.0054 (11)−0.0071 (9)
C30.0624 (13)0.0509 (10)0.0516 (10)−0.0062 (11)0.0002 (11)−0.0008 (9)
C40.0776 (17)0.0688 (12)0.0547 (12)−0.0082 (13)−0.0035 (11)−0.0005 (10)
C50.0798 (18)0.0711 (13)0.0632 (14)−0.0008 (15)−0.0110 (13)0.0132 (11)
C60.0685 (16)0.0564 (11)0.0767 (14)0.0005 (12)−0.0096 (13)0.0088 (11)
C70.0619 (13)0.0499 (10)0.0598 (12)0.0004 (11)0.0024 (12)−0.0010 (9)
C80.0538 (12)0.0448 (9)0.0507 (10)−0.0079 (10)0.0012 (9)0.0028 (8)
C90.0509 (12)0.0521 (10)0.0477 (10)0.0018 (10)0.0011 (9)0.0003 (8)
C100.0625 (14)0.0527 (11)0.0622 (13)−0.0027 (11)0.0032 (12)−0.0012 (9)
C110.0782 (17)0.0662 (12)0.0646 (14)0.0101 (14)−0.0076 (13)−0.0139 (11)
C120.0856 (19)0.0907 (16)0.0475 (11)0.0272 (16)−0.0009 (12)−0.0046 (12)
C130.0742 (17)0.0805 (15)0.0571 (12)0.0090 (14)0.0097 (13)0.0159 (11)
C140.0598 (14)0.0561 (10)0.0581 (11)−0.0023 (11)0.0022 (11)0.0069 (9)
N1—C11.380 (2)C6—H60.9300
N1—C81.427 (2)C7—C81.374 (3)
N1—C91.436 (2)C7—H70.9300
O1—C11.210 (2)C9—C141.381 (3)
O2—C21.205 (2)C9—C101.383 (3)
C1—C21.545 (3)C10—C111.376 (3)
C2—C31.453 (3)C10—H100.9300
C3—C41.381 (3)C11—C121.368 (3)
C3—C81.395 (3)C11—H110.9300
C4—C51.378 (3)C12—C131.366 (3)
C4—H40.9300C12—H120.9300
C5—C61.377 (3)C13—C141.381 (3)
C5—H50.9300C13—H130.9300
C6—C71.394 (3)C14—H140.9300
C1—N1—C8109.94 (15)C6—C7—H7121.5
C1—N1—C9124.71 (15)C7—C8—C3120.98 (17)
C8—N1—C9125.34 (15)C7—C8—N1128.50 (16)
O1—C1—N1127.60 (18)C3—C8—N1110.52 (16)
O1—C1—C2126.19 (18)C14—C9—C10120.60 (17)
N1—C1—C2106.20 (16)C14—C9—N1118.86 (16)
O2—C2—C3131.34 (19)C10—C9—N1120.53 (17)
O2—C2—C1123.17 (19)C11—C10—C9119.18 (19)
C3—C2—C1105.49 (16)C11—C10—H10120.4
C4—C3—C8120.96 (19)C9—C10—H10120.4
C4—C3—C2131.19 (19)C12—C11—C10120.3 (2)
C8—C3—C2107.85 (16)C12—C11—H11119.8
C5—C4—C3118.6 (2)C10—C11—H11119.8
C5—C4—H4120.7C13—C12—C11120.5 (2)
C3—C4—H4120.7C13—C12—H12119.7
C6—C5—C4119.9 (2)C11—C12—H12119.7
C6—C5—H5120.1C12—C13—C14120.2 (2)
C4—C5—H5120.1C12—C13—H13119.9
C5—C6—C7122.5 (2)C14—C13—H13119.9
C5—C6—H6118.8C13—C14—C9119.12 (19)
C7—C6—H6118.8C13—C14—H14120.4
C8—C7—C6117.03 (19)C9—C14—H14120.4
C8—C7—H7121.5
C8—N1—C1—O1−179.8 (2)C2—C3—C8—C7179.5 (2)
C9—N1—C1—O11.2 (3)C4—C3—C8—N1179.6 (2)
C8—N1—C1—C2−0.4 (2)C2—C3—C8—N10.0 (2)
C9—N1—C1—C2−179.38 (19)C1—N1—C8—C7−179.2 (2)
O1—C1—C2—O20.6 (4)C9—N1—C8—C7−0.3 (3)
N1—C1—C2—O2−178.8 (2)C1—N1—C8—C30.3 (2)
O1—C1—C2—C3179.8 (2)C9—N1—C8—C3179.23 (19)
N1—C1—C2—C30.4 (2)C1—N1—C9—C1449.4 (3)
O2—C2—C3—C4−0.6 (4)C8—N1—C9—C14−129.4 (2)
C1—C2—C3—C4−179.8 (2)C1—N1—C9—C10−129.4 (2)
O2—C2—C3—C8178.9 (3)C8—N1—C9—C1051.9 (3)
C1—C2—C3—C8−0.3 (2)C14—C9—C10—C111.0 (3)
C8—C3—C4—C50.6 (3)N1—C9—C10—C11179.7 (2)
C2—C3—C4—C5−179.9 (2)C9—C10—C11—C12−1.2 (4)
C3—C4—C5—C60.1 (4)C10—C11—C12—C130.5 (4)
C4—C5—C6—C7−0.6 (4)C11—C12—C13—C140.5 (4)
C5—C6—C7—C80.3 (4)C12—C13—C14—C9−0.7 (4)
C6—C7—C8—C30.4 (3)C10—C9—C14—C130.0 (3)
C6—C7—C8—N1179.8 (2)N1—C9—C14—C13−178.8 (2)
C4—C3—C8—C7−0.9 (3)
D—H···AD—HH···AD···AD—H···A
C4—H4···O2i0.932.583.297 (3)134.
C7—H7···O1ii0.932.523.262 (2)137.
C11—H11···O2iii0.932.583.407 (3)149.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4⋯O2i0.932.583.297 (3)134
C7—H7⋯O1ii0.932.523.262 (2)137
C11—H11⋯O2iii0.932.583.407 (3)149

Symmetry codes: (i) ; (ii) ; (iii) .

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