| Literature DB >> 22091048 |
Xuan Liu, Daxin Shi, Jianhong Tang, Deli Yang, Jiarong Li.
Abstract
In the title compound, C(21)H(21)N(3)OS·C(3)H(7)NO, the carbonitrile mol-ecule is built up of two fused six-membered rings and one six-membered ring linked through a spiro C atom. The 1,3-diaza ring adopts an envelope conformation and the cyclo-hexane ring adopts a chair conformation. The dihedral angle between the aromatic rings is 46.7 (3)°. In the crystal, the components are linked by N-H⋯O hydrogen bonds.Entities:
Year: 2011 PMID: 22091048 PMCID: PMC3213469 DOI: 10.1107/S1600536811026948
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H21N3OS·C3H7NO | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3507 reflections | |
| θ = 2.5–29.1° | |
| µ = 0.18 mm−1 | |
| α = 95.092 (3)° | |
| β = 98.156 (4)° | Chunk, colorless |
| γ = 109.833 (3)° | 0.31 × 0.31 × 0.12 mm |
| Rigaku AFC10/Saturn724+ diffractometer | 5754 independent reflections |
| Radiation source: Rotating Anode | 4274 reflections with |
| graphite | |
| Detector resolution: 28.5714 pixels mm-1 | θmax = 29.1°, θmin = 2.5° |
| phi and ω scans | |
| Absorption correction: ψ scan (North et al., 1968) | |
| 11758 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5754 reflections | (Δ/σ)max = 0.001 |
| 291 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.30973 (5) | 0.65929 (4) | 0.27438 (3) | 0.02075 (11) | |
| O1 | 0.43889 (14) | 0.57074 (13) | 0.11197 (9) | 0.0275 (3) | |
| N4 | 0.75021 (19) | 0.94951 (17) | 0.28720 (14) | 0.0374 (4) | |
| O2 | 0.6020 (2) | 1.02046 (18) | 0.39412 (16) | 0.0580 (5) | |
| N1 | 0.79059 (16) | 0.52496 (15) | 0.31427 (11) | 0.0197 (3) | |
| N2 | 0.63848 (16) | 0.49735 (14) | 0.13547 (11) | 0.0200 (3) | |
| N3 | 0.99764 (17) | 0.62325 (16) | 0.58365 (11) | 0.0259 (3) | |
| C1 | 0.87655 (18) | 0.44768 (18) | 0.15077 (13) | 0.0221 (3) | |
| H1A | 0.9264 | 0.5415 | 0.1362 | 0.026* | |
| H1B | 0.9511 | 0.4266 | 0.2057 | 0.026* | |
| C2 | 0.8378 (2) | 0.3509 (2) | 0.03980 (14) | 0.0288 (4) | |
| H2A | 0.7780 | 0.3812 | −0.0195 | 0.035* | |
| H2B | 0.9341 | 0.3531 | 0.0145 | 0.035* | |
| C3 | 0.7457 (2) | 0.2069 (2) | 0.05401 (16) | 0.0362 (5) | |
| H3A | 0.8102 | 0.1724 | 0.1062 | 0.043* | |
| H3B | 0.7158 | 0.1481 | −0.0204 | 0.043* | |
| C4 | 0.6018 (2) | 0.20061 (19) | 0.10126 (16) | 0.0316 (4) | |
| H4A | 0.5451 | 0.1063 | 0.1114 | 0.038* | |
| H4B | 0.5338 | 0.2292 | 0.0468 | 0.038* | |
| C5 | 0.64463 (19) | 0.29280 (17) | 0.21494 (14) | 0.0226 (3) | |
| H5A | 0.7069 | 0.2603 | 0.2707 | 0.027* | |
| H5B | 0.5499 | 0.2887 | 0.2436 | 0.027* | |
| C6 | 0.73564 (17) | 0.43950 (16) | 0.20362 (12) | 0.0166 (3) | |
| C7 | 0.54013 (18) | 0.54868 (16) | 0.17623 (13) | 0.0187 (3) | |
| C8 | 0.56754 (17) | 0.58920 (16) | 0.30038 (12) | 0.0163 (3) | |
| C9 | 0.47755 (17) | 0.65007 (16) | 0.35316 (13) | 0.0166 (3) | |
| C10 | 0.52394 (17) | 0.70489 (16) | 0.46842 (13) | 0.0178 (3) | |
| H10 | 0.4628 | 0.7455 | 0.5037 | 0.021* | |
| C11 | 0.65724 (17) | 0.70114 (15) | 0.53231 (13) | 0.0165 (3) | |
| C12 | 0.74383 (17) | 0.63548 (16) | 0.48131 (12) | 0.0160 (3) | |
| C13 | 0.69977 (17) | 0.57954 (15) | 0.36522 (13) | 0.0160 (3) | |
| C14 | 0.71051 (17) | 0.77401 (16) | 0.65038 (13) | 0.0168 (3) | |
| C15 | 0.70835 (19) | 0.90471 (17) | 0.67204 (14) | 0.0222 (3) | |
| H15 | 0.6717 | 0.9444 | 0.6119 | 0.027* | |
| C16 | 0.7592 (2) | 0.97693 (18) | 0.78055 (14) | 0.0276 (4) | |
| H16 | 0.7583 | 1.0662 | 0.7942 | 0.033* | |
| C17 | 0.8112 (2) | 0.9198 (2) | 0.86898 (14) | 0.0303 (4) | |
| H17 | 0.8468 | 0.9700 | 0.9431 | 0.036* | |
| C18 | 0.8114 (2) | 0.7890 (2) | 0.84928 (14) | 0.0282 (4) | |
| H18 | 0.8453 | 0.7491 | 0.9103 | 0.034* | |
| C19 | 0.76196 (19) | 0.71616 (18) | 0.74030 (13) | 0.0218 (3) | |
| H19 | 0.7632 | 0.6270 | 0.7270 | 0.026* | |
| C20 | 0.2291 (2) | 0.72814 (19) | 0.38122 (15) | 0.0271 (4) | |
| H20A | 0.2100 | 0.6684 | 0.4393 | 0.033* | |
| H20B | 0.1321 | 0.7352 | 0.3461 | 0.033* | |
| H20C | 0.3013 | 0.8182 | 0.4163 | 0.033* | |
| C21 | 0.88385 (18) | 0.63108 (16) | 0.54123 (13) | 0.0183 (3) | |
| C22 | 0.6208 (3) | 0.9699 (2) | 0.3065 (2) | 0.0446 (6) | |
| H22 | 0.5366 | 0.9415 | 0.2448 | 0.053* | |
| C24 | 0.8796 (3) | 0.9892 (3) | 0.3788 (2) | 0.0567 (7) | |
| H24A | 0.8536 | 1.0275 | 0.4468 | 0.068* | |
| H24B | 0.9676 | 1.0573 | 0.3576 | 0.068* | |
| H24C | 0.9058 | 0.9099 | 0.3944 | 0.068* | |
| C23 | 0.7636 (3) | 0.8852 (3) | 0.1816 (2) | 0.0654 (8) | |
| H23A | 0.6646 | 0.8547 | 0.1295 | 0.078* | |
| H23B | 0.7935 | 0.8070 | 0.1947 | 0.078* | |
| H23C | 0.8418 | 0.9496 | 0.1485 | 0.078* | |
| H11 | 0.855 (2) | 0.504 (2) | 0.3564 (16) | 0.029 (5)* | |
| H21 | 0.621 (2) | 0.4760 (19) | 0.0607 (17) | 0.030 (5)* |
| S1 | 0.01842 (19) | 0.0274 (2) | 0.0198 (2) | 0.01458 (16) | 0.00019 (15) | 0.00021 (16) |
| O1 | 0.0315 (7) | 0.0441 (8) | 0.0155 (6) | 0.0282 (6) | −0.0021 (5) | −0.0003 (5) |
| N4 | 0.0314 (9) | 0.0385 (10) | 0.0354 (9) | 0.0042 (7) | 0.0027 (7) | 0.0091 (8) |
| O2 | 0.0584 (11) | 0.0559 (11) | 0.0747 (12) | 0.0312 (9) | 0.0266 (10) | 0.0201 (10) |
| N1 | 0.0200 (7) | 0.0298 (8) | 0.0127 (6) | 0.0164 (6) | −0.0019 (5) | −0.0024 (6) |
| N2 | 0.0241 (7) | 0.0299 (8) | 0.0117 (7) | 0.0179 (6) | 0.0011 (5) | 0.0016 (6) |
| N3 | 0.0253 (7) | 0.0387 (9) | 0.0182 (7) | 0.0192 (7) | 0.0016 (6) | −0.0002 (6) |
| C1 | 0.0196 (7) | 0.0350 (10) | 0.0168 (8) | 0.0153 (7) | 0.0048 (6) | 0.0058 (7) |
| C2 | 0.0305 (9) | 0.0491 (12) | 0.0175 (8) | 0.0277 (9) | 0.0062 (7) | 0.0020 (8) |
| C3 | 0.0482 (12) | 0.0418 (12) | 0.0254 (10) | 0.0303 (10) | 0.0008 (8) | −0.0086 (8) |
| C4 | 0.0362 (10) | 0.0254 (10) | 0.0309 (10) | 0.0125 (8) | 0.0003 (8) | −0.0041 (8) |
| C5 | 0.0231 (8) | 0.0256 (9) | 0.0215 (8) | 0.0118 (7) | 0.0042 (6) | 0.0029 (7) |
| C6 | 0.0189 (7) | 0.0239 (8) | 0.0104 (7) | 0.0130 (6) | 0.0013 (6) | 0.0006 (6) |
| C7 | 0.0210 (7) | 0.0224 (8) | 0.0156 (8) | 0.0126 (6) | 0.0016 (6) | 0.0009 (6) |
| C8 | 0.0169 (7) | 0.0198 (8) | 0.0141 (7) | 0.0095 (6) | 0.0014 (6) | 0.0013 (6) |
| C9 | 0.0155 (7) | 0.0187 (8) | 0.0163 (7) | 0.0076 (6) | 0.0014 (6) | 0.0031 (6) |
| C10 | 0.0182 (7) | 0.0215 (8) | 0.0170 (8) | 0.0112 (6) | 0.0044 (6) | 0.0015 (6) |
| C11 | 0.0172 (7) | 0.0178 (8) | 0.0154 (7) | 0.0072 (6) | 0.0036 (6) | 0.0023 (6) |
| C12 | 0.0166 (7) | 0.0185 (8) | 0.0142 (7) | 0.0087 (6) | 0.0010 (6) | 0.0015 (6) |
| C13 | 0.0167 (7) | 0.0176 (8) | 0.0158 (7) | 0.0087 (6) | 0.0032 (6) | 0.0022 (6) |
| C14 | 0.0162 (7) | 0.0209 (8) | 0.0145 (7) | 0.0083 (6) | 0.0039 (6) | 0.0006 (6) |
| C15 | 0.0251 (8) | 0.0260 (9) | 0.0182 (8) | 0.0131 (7) | 0.0042 (6) | 0.0014 (7) |
| C16 | 0.0341 (10) | 0.0251 (9) | 0.0253 (9) | 0.0147 (8) | 0.0059 (7) | −0.0048 (7) |
| C17 | 0.0343 (10) | 0.0404 (11) | 0.0159 (8) | 0.0176 (8) | 0.0002 (7) | −0.0078 (7) |
| C18 | 0.0320 (9) | 0.0418 (11) | 0.0165 (8) | 0.0213 (8) | 0.0022 (7) | 0.0046 (8) |
| C19 | 0.0248 (8) | 0.0260 (9) | 0.0189 (8) | 0.0136 (7) | 0.0063 (6) | 0.0043 (7) |
| C20 | 0.0240 (8) | 0.0369 (11) | 0.0274 (9) | 0.0203 (8) | 0.0055 (7) | 0.0013 (8) |
| C21 | 0.0229 (8) | 0.0220 (8) | 0.0121 (7) | 0.0117 (6) | 0.0032 (6) | −0.0017 (6) |
| C22 | 0.0348 (11) | 0.0402 (13) | 0.0534 (14) | 0.0054 (9) | 0.0004 (10) | 0.0248 (11) |
| C24 | 0.0370 (12) | 0.0674 (18) | 0.0595 (16) | 0.0165 (12) | −0.0021 (11) | 0.0040 (13) |
| C23 | 0.079 (2) | 0.0561 (17) | 0.0461 (15) | 0.0015 (14) | 0.0222 (14) | 0.0024 (12) |
| S1—C9 | 1.7611 (16) | C8—C9 | 1.411 (2) |
| S1—C20 | 1.8033 (17) | C8—C13 | 1.412 (2) |
| O1—C7 | 1.2394 (18) | C9—C10 | 1.402 (2) |
| N4—C22 | 1.355 (3) | C10—C11 | 1.391 (2) |
| N4—C23 | 1.431 (3) | C10—H10 | 0.9500 |
| N4—C24 | 1.437 (3) | C11—C12 | 1.407 (2) |
| O2—C22 | 1.204 (3) | C11—C14 | 1.486 (2) |
| N1—C13 | 1.3655 (19) | C12—C13 | 1.414 (2) |
| N1—C6 | 1.4616 (19) | C12—C21 | 1.428 (2) |
| N1—H11 | 0.84 (2) | C14—C15 | 1.396 (2) |
| N2—C7 | 1.349 (2) | C14—C19 | 1.398 (2) |
| N2—C6 | 1.4644 (19) | C15—C16 | 1.385 (2) |
| N2—H21 | 0.89 (2) | C15—H15 | 0.9500 |
| N3—C21 | 1.152 (2) | C16—C17 | 1.381 (3) |
| C1—C2 | 1.529 (2) | C16—H16 | 0.9500 |
| C1—C6 | 1.531 (2) | C17—C18 | 1.389 (3) |
| C1—H1A | 0.9900 | C17—H17 | 0.9500 |
| C1—H1B | 0.9900 | C18—C19 | 1.392 (2) |
| C2—C3 | 1.519 (3) | C18—H18 | 0.9500 |
| C2—H2A | 0.9900 | C19—H19 | 0.9500 |
| C2—H2B | 0.9900 | C20—H20A | 0.9800 |
| C3—C4 | 1.525 (3) | C20—H20B | 0.9800 |
| C3—H3A | 0.9900 | C20—H20C | 0.9800 |
| C3—H3B | 0.9900 | C22—H22 | 0.9500 |
| C4—C5 | 1.527 (2) | C24—H24A | 0.9800 |
| C4—H4A | 0.9900 | C24—H24B | 0.9800 |
| C4—H4B | 0.9900 | C24—H24C | 0.9800 |
| C5—C6 | 1.531 (2) | C23—H23A | 0.9800 |
| C5—H5A | 0.9900 | C23—H23B | 0.9800 |
| C5—H5B | 0.9900 | C23—H23C | 0.9800 |
| C7—C8 | 1.479 (2) | ||
| C9—S1—C20 | 102.83 (8) | C8—C9—S1 | 120.24 (11) |
| C22—N4—C23 | 123.6 (2) | C11—C10—C9 | 121.56 (14) |
| C22—N4—C24 | 118.59 (19) | C11—C10—H10 | 119.2 |
| C23—N4—C24 | 117.7 (2) | C9—C10—H10 | 119.2 |
| C13—N1—C6 | 122.09 (13) | C10—C11—C12 | 119.13 (14) |
| C13—N1—H11 | 117.5 (13) | C10—C11—C14 | 119.37 (13) |
| C6—N1—H11 | 112.7 (13) | C12—C11—C14 | 121.38 (14) |
| C7—N2—C6 | 124.20 (13) | C11—C12—C13 | 120.40 (14) |
| C7—N2—H21 | 114.8 (13) | C11—C12—C21 | 121.94 (14) |
| C6—N2—H21 | 118.3 (13) | C13—C12—C21 | 117.50 (13) |
| C2—C1—C6 | 113.17 (14) | N1—C13—C8 | 120.12 (13) |
| C2—C1—H1A | 108.9 | N1—C13—C12 | 120.04 (14) |
| C6—C1—H1A | 108.9 | C8—C13—C12 | 119.68 (13) |
| C2—C1—H1B | 108.9 | C15—C14—C19 | 118.98 (15) |
| C6—C1—H1B | 108.9 | C15—C14—C11 | 118.66 (14) |
| H1A—C1—H1B | 107.8 | C19—C14—C11 | 122.36 (14) |
| C3—C2—C1 | 111.36 (15) | C16—C15—C14 | 120.51 (16) |
| C3—C2—H2A | 109.4 | C16—C15—H15 | 119.7 |
| C1—C2—H2A | 109.4 | C14—C15—H15 | 119.7 |
| C3—C2—H2B | 109.4 | C17—C16—C15 | 120.32 (17) |
| C1—C2—H2B | 109.4 | C17—C16—H16 | 119.8 |
| H2A—C2—H2B | 108.0 | C15—C16—H16 | 119.8 |
| C2—C3—C4 | 111.08 (15) | C16—C17—C18 | 119.89 (16) |
| C2—C3—H3A | 109.4 | C16—C17—H17 | 120.1 |
| C4—C3—H3A | 109.4 | C18—C17—H17 | 120.1 |
| C2—C3—H3B | 109.4 | C17—C18—C19 | 120.19 (16) |
| C4—C3—H3B | 109.4 | C17—C18—H18 | 119.9 |
| H3A—C3—H3B | 108.0 | C19—C18—H18 | 119.9 |
| C3—C4—C5 | 110.48 (15) | C18—C19—C14 | 120.10 (16) |
| C3—C4—H4A | 109.6 | C18—C19—H19 | 120.0 |
| C5—C4—H4A | 109.6 | C14—C19—H19 | 120.0 |
| C3—C4—H4B | 109.6 | S1—C20—H20A | 109.5 |
| C5—C4—H4B | 109.6 | S1—C20—H20B | 109.5 |
| H4A—C4—H4B | 108.1 | H20A—C20—H20B | 109.5 |
| C4—C5—C6 | 111.32 (14) | S1—C20—H20C | 109.5 |
| C4—C5—H5A | 109.4 | H20A—C20—H20C | 109.5 |
| C6—C5—H5A | 109.4 | H20B—C20—H20C | 109.5 |
| C4—C5—H5B | 109.4 | N3—C21—C12 | 175.83 (16) |
| C6—C5—H5B | 109.4 | O2—C22—N4 | 126.4 (2) |
| H5A—C5—H5B | 108.0 | O2—C22—H22 | 116.8 |
| N1—C6—N2 | 106.52 (12) | N4—C22—H22 | 116.8 |
| N1—C6—C5 | 111.29 (13) | N4—C24—H24A | 109.5 |
| N2—C6—C5 | 110.69 (13) | N4—C24—H24B | 109.5 |
| N1—C6—C1 | 107.40 (13) | H24A—C24—H24B | 109.5 |
| N2—C6—C1 | 110.23 (13) | N4—C24—H24C | 109.5 |
| C5—C6—C1 | 110.60 (13) | H24A—C24—H24C | 109.5 |
| O1—C7—N2 | 121.46 (14) | H24B—C24—H24C | 109.5 |
| O1—C7—C8 | 121.36 (14) | N4—C23—H23A | 109.5 |
| N2—C7—C8 | 116.94 (14) | N4—C23—H23B | 109.5 |
| C9—C8—C13 | 119.62 (13) | H23A—C23—H23B | 109.5 |
| C9—C8—C7 | 122.55 (14) | N4—C23—H23C | 109.5 |
| C13—C8—C7 | 117.44 (13) | H23A—C23—H23C | 109.5 |
| C10—C9—C8 | 119.49 (14) | H23B—C23—H23C | 109.5 |
| C10—C9—S1 | 120.26 (11) | ||
| C6—C1—C2—C3 | −52.6 (2) | C9—C10—C11—C12 | −2.9 (2) |
| C1—C2—C3—C4 | 54.9 (2) | C9—C10—C11—C14 | 173.20 (14) |
| C2—C3—C4—C5 | −57.9 (2) | C10—C11—C12—C13 | 2.9 (2) |
| C3—C4—C5—C6 | 58.0 (2) | C14—C11—C12—C13 | −173.08 (14) |
| C13—N1—C6—N2 | 37.8 (2) | C10—C11—C12—C21 | 178.32 (14) |
| C13—N1—C6—C5 | −82.94 (18) | C14—C11—C12—C21 | 2.3 (2) |
| C13—N1—C6—C1 | 155.88 (15) | C6—N1—C13—C8 | −18.7 (2) |
| C7—N2—C6—N1 | −39.4 (2) | C6—N1—C13—C12 | 165.86 (14) |
| C7—N2—C6—C5 | 81.73 (18) | C9—C8—C13—N1 | −177.79 (14) |
| C7—N2—C6—C1 | −155.59 (15) | C7—C8—C13—N1 | −4.8 (2) |
| C4—C5—C6—N1 | −173.96 (13) | C9—C8—C13—C12 | −2.4 (2) |
| C4—C5—C6—N2 | 67.79 (16) | C7—C8—C13—C12 | 170.62 (14) |
| C4—C5—C6—C1 | −54.67 (18) | C11—C12—C13—N1 | 175.10 (15) |
| C2—C1—C6—N1 | 173.76 (14) | C21—C12—C13—N1 | −0.5 (2) |
| C2—C1—C6—N2 | −70.58 (18) | C11—C12—C13—C8 | −0.3 (2) |
| C2—C1—C6—C5 | 52.15 (18) | C21—C12—C13—C8 | −175.91 (14) |
| C6—N2—C7—O1 | −165.03 (15) | C10—C11—C14—C15 | −44.1 (2) |
| C6—N2—C7—C8 | 20.5 (2) | C12—C11—C14—C15 | 131.86 (16) |
| O1—C7—C8—C9 | 2.4 (3) | C10—C11—C14—C19 | 135.62 (16) |
| N2—C7—C8—C9 | 176.94 (15) | C12—C11—C14—C19 | −48.4 (2) |
| O1—C7—C8—C13 | −170.34 (16) | C19—C14—C15—C16 | 1.2 (2) |
| N2—C7—C8—C13 | 4.2 (2) | C11—C14—C15—C16 | −179.02 (15) |
| C13—C8—C9—C10 | 2.5 (2) | C14—C15—C16—C17 | −0.7 (3) |
| C7—C8—C9—C10 | −170.18 (14) | C15—C16—C17—C18 | −0.5 (3) |
| C13—C8—C9—S1 | −178.45 (12) | C16—C17—C18—C19 | 1.2 (3) |
| C7—C8—C9—S1 | 8.9 (2) | C17—C18—C19—C14 | −0.6 (3) |
| C20—S1—C9—C10 | −6.48 (15) | C15—C14—C19—C18 | −0.6 (2) |
| C20—S1—C9—C8 | 174.42 (13) | C11—C14—C19—C18 | 179.68 (15) |
| C8—C9—C10—C11 | 0.2 (2) | C23—N4—C22—O2 | 178.2 (2) |
| S1—C9—C10—C11 | −178.91 (12) | C24—N4—C22—O2 | 0.9 (3) |
| H··· | ||||
| N1—H11···N3i | 0.838 (10) | 2.328 (14) | 3.120 (2) | 157.96 (3) |
| N2—H21···O1ii | 0.886 (10) | 2.044 (18) | 2.927 (3) | 174.94 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H11⋯N3i | 0.838 (10) | 2.328 (14) | 3.120 (2) | 157.96 (3) |
| N2—H21⋯O1ii | 0.886 (10) | 2.044 (18) | 2.927 (3) | 174.94 (3) |
Symmetry codes: (i) ; (ii) .