Literature DB >> 22090960

Ethyl 3-(4-chloro-phen-yl)-1-(2-oxo-2-phenyl-eth-yl)-1H-pyrazole-5-carboxyl-ate.

Liang-Wen Zheng1, Yin-Rui Liu, Bao-Xiang Zhao.   

Abstract

In the title compound, C(20)H(17)ClN(2)O(3), the dihedral angles between the pyrazole ring and the substituted and unsubstituted benzene rings are 3.64 (13) and 81.15 (17)°, respectively. Mol-ecules are connected via three pairs of weak hydrogen bonds into a centrosymmetric dimer. The crystal structure is stabilized by inter-molecular C-H⋯O and C-H⋯π inter-actions.

Entities:  

Year:  2011        PMID: 22090960      PMCID: PMC3212303          DOI: 10.1107/S1600536811025918

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of pyrazoles, see: Kosuge & Kamiya (1962 ▶); Ganesan (1996 ▶); Farag et al. (2010 ▶); Boschi et al. (2011 ▶); Kasımoğullan et al. (2010 ▶); Christodoulou et al. (2010 ▶); Scanio et al. (2010 ▶); Da Sliva et al. (2010 ▶). For related structures, see: Xie et al. (2009 ▶); Arban et al. (2010 ▶). For the synthesis of ethyl 3-(4-chloro­phen­yl)-1-(2-oxo-2-phenyl­eth­yl)-1H-pyrazole-5-carboxyl­ate, see: Zheng et al. (2010 ▶).

Experimental

Crystal data

C20H17ClN2O3 M = 368.81 Triclinic, a = 7.7238 (10) Å b = 8.382 (1) Å c = 15.8143 (18) Å α = 98.667 (2)° β = 93.828 (2)° γ = 113.849 (2)° V = 916.44 (19) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.12 × 0.10 × 0.06 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.973, T max = 0.986 4894 measured reflections 3216 independent reflections 2079 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.123 S = 1.04 3216 reflections 237 parameters H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811025918/vm2105sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025918/vm2105Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811025918/vm2105Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H17ClN2O3Z = 2
Mr = 368.81F(000) = 384
Triclinic, P1Dx = 1.337 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.7238 (10) ÅCell parameters from 1101 reflections
b = 8.382 (1) Åθ = 2.7–22.0°
c = 15.8143 (18) ŵ = 0.23 mm1
α = 98.667 (2)°T = 296 K
β = 93.828 (2)°Block, colorless
γ = 113.849 (2)°0.12 × 0.10 × 0.06 mm
V = 916.44 (19) Å3
Bruker APEXII CCD area-detector diffractometer3216 independent reflections
Radiation source: fine-focus sealed tube2079 reflections with I > 2σ(I)
graphiteRint = 0.018
phi and ω scansθmax = 25.1°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −9→8
Tmin = 0.973, Tmax = 0.986k = −9→9
4894 measured reflectionsl = −18→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048H-atom parameters constrained
wR(F2) = 0.123w = 1/[σ2(Fo2) + (0.0468P)2 + 0.1653P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
3216 reflectionsΔρmax = 0.17 e Å3
237 parametersΔρmin = −0.18 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.008 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl11.39705 (12)0.55340 (11)0.24320 (5)0.0857 (3)
O10.4703 (3)0.6797 (3)0.61211 (13)0.0882 (7)
O20.6629 (2)0.8989 (2)0.71892 (11)0.0689 (5)
O31.0787 (3)0.9089 (2)0.79687 (11)0.0765 (6)
N10.9783 (3)0.9370 (2)0.63117 (12)0.0502 (5)
N21.1032 (3)0.9166 (2)0.58057 (12)0.0516 (5)
C10.5722 (5)1.0065 (5)0.8478 (2)0.1137 (13)
H1A0.66250.97900.88020.171*
H1B0.46750.99570.87950.171*
H1C0.63371.12600.83820.171*
C20.4997 (4)0.8818 (4)0.7639 (2)0.0894 (10)
H2A0.43400.76090.77280.107*
H2B0.41030.91010.73000.107*
C30.6271 (4)0.7888 (3)0.64366 (16)0.0583 (7)
C40.7978 (3)0.8102 (3)0.60278 (14)0.0490 (6)
C50.8081 (3)0.7040 (3)0.53051 (15)0.0510 (6)
H50.70780.60560.49640.061*
C60.9993 (3)0.7733 (3)0.51840 (14)0.0470 (6)
C71.0940 (3)0.7141 (3)0.45134 (14)0.0474 (6)
C80.9962 (4)0.5635 (3)0.38749 (15)0.0532 (6)
H80.86670.49530.38750.064*
C91.0887 (4)0.5136 (3)0.32388 (15)0.0571 (7)
H91.02210.41190.28160.069*
C101.2795 (4)0.6148 (3)0.32337 (16)0.0591 (7)
C111.3793 (4)0.7624 (4)0.38583 (17)0.0725 (8)
H111.50900.82970.38560.087*
C121.2863 (4)0.8106 (4)0.44906 (17)0.0697 (8)
H121.35500.91130.49160.084*
C131.0477 (3)1.0912 (3)0.70068 (14)0.0530 (6)
H13A0.95351.14030.70300.064*
H13B1.16411.18080.68760.064*
C141.0880 (3)1.0536 (3)0.78837 (15)0.0530 (6)
C151.1408 (3)1.2016 (3)0.86377 (16)0.0556 (7)
C161.1626 (4)1.3698 (4)0.85486 (18)0.0757 (9)
H161.14641.39380.80010.091*
C171.2085 (5)1.5024 (4)0.9269 (2)0.1021 (12)
H171.22231.61530.92050.122*
C181.2337 (6)1.4687 (5)1.0071 (2)0.1132 (13)
H181.26451.55831.05550.136*
C191.2139 (6)1.3030 (5)1.0166 (2)0.1131 (13)
H191.23131.28011.07150.136*
C201.1684 (5)1.1703 (4)0.94532 (18)0.0823 (9)
H201.15611.05820.95230.099*
U11U22U33U12U13U23
Cl10.0942 (6)0.0923 (6)0.0644 (5)0.0382 (5)0.0278 (4)−0.0068 (4)
O10.0441 (11)0.1021 (15)0.0846 (15)0.0121 (11)0.0016 (10)−0.0234 (12)
O20.0548 (11)0.0744 (12)0.0650 (12)0.0223 (9)0.0134 (9)−0.0112 (10)
O30.1026 (16)0.0619 (12)0.0619 (13)0.0395 (11)−0.0061 (10)−0.0036 (9)
N10.0477 (12)0.0485 (11)0.0419 (11)0.0137 (10)0.0032 (9)−0.0072 (9)
N20.0477 (12)0.0529 (12)0.0432 (12)0.0146 (10)0.0045 (9)−0.0031 (9)
C10.105 (3)0.139 (3)0.091 (3)0.057 (3)0.031 (2)−0.017 (2)
C20.064 (2)0.111 (3)0.086 (2)0.0386 (18)0.0236 (17)−0.0116 (19)
C30.0511 (17)0.0620 (16)0.0549 (17)0.0217 (14)0.0052 (13)−0.0024 (13)
C40.0445 (14)0.0495 (14)0.0456 (14)0.0162 (11)0.0006 (11)0.0006 (11)
C50.0455 (14)0.0508 (14)0.0458 (14)0.0141 (11)0.0000 (11)−0.0020 (11)
C60.0460 (14)0.0478 (13)0.0395 (13)0.0148 (11)0.0011 (11)0.0025 (11)
C70.0476 (14)0.0473 (13)0.0397 (13)0.0152 (11)0.0025 (10)0.0016 (10)
C80.0516 (15)0.0459 (13)0.0523 (15)0.0147 (12)0.0016 (12)0.0004 (11)
C90.0685 (18)0.0459 (14)0.0469 (15)0.0202 (13)−0.0006 (12)−0.0052 (11)
C100.0642 (18)0.0605 (16)0.0469 (15)0.0238 (14)0.0112 (12)−0.0006 (12)
C110.0555 (17)0.0782 (19)0.0575 (17)0.0099 (14)0.0136 (13)−0.0126 (14)
C120.0553 (17)0.0687 (17)0.0556 (17)0.0071 (14)0.0071 (13)−0.0184 (13)
C130.0524 (15)0.0494 (14)0.0453 (15)0.0143 (12)0.0044 (11)−0.0038 (11)
C140.0453 (15)0.0537 (15)0.0508 (16)0.0166 (12)0.0034 (11)−0.0033 (12)
C150.0529 (16)0.0596 (16)0.0472 (16)0.0225 (13)0.0028 (12)−0.0047 (12)
C160.096 (2)0.0646 (18)0.0563 (18)0.0314 (16)0.0044 (15)−0.0087 (14)
C170.146 (3)0.069 (2)0.077 (3)0.042 (2)0.009 (2)−0.0134 (18)
C180.161 (4)0.097 (3)0.065 (2)0.055 (3)0.002 (2)−0.028 (2)
C190.167 (4)0.112 (3)0.052 (2)0.063 (3)−0.005 (2)−0.010 (2)
C200.111 (3)0.080 (2)0.0514 (18)0.0417 (19)0.0006 (16)−0.0029 (15)
Cl1—C101.741 (2)C8—H80.9300
O1—C31.199 (3)C9—C101.373 (3)
O2—C31.328 (3)C9—H90.9300
O2—C21.456 (3)C10—C111.363 (3)
O3—C141.214 (3)C11—C121.374 (3)
N1—N21.340 (2)C11—H110.9300
N1—C41.360 (3)C12—H120.9300
N1—C131.449 (3)C13—C141.508 (3)
N2—C61.346 (3)C13—H13A0.9700
C1—C21.475 (4)C13—H13B0.9700
C1—H1A0.9600C14—C151.486 (3)
C1—H1B0.9600C15—C201.374 (4)
C1—H1C0.9600C15—C161.381 (4)
C2—H2A0.9700C16—C171.380 (4)
C2—H2B0.9700C16—H160.9300
C3—C41.465 (3)C17—C181.358 (5)
C4—C51.367 (3)C17—H170.9300
C5—C61.390 (3)C18—C191.368 (5)
C5—H50.9300C18—H180.9300
C6—C71.464 (3)C19—C201.373 (4)
C7—C121.381 (3)C19—H190.9300
C7—C81.388 (3)C20—H200.9300
C8—C91.381 (3)
C3—O2—C2116.6 (2)C8—C9—H9120.2
N2—N1—C4111.60 (17)C11—C10—C9120.7 (2)
N2—N1—C13117.93 (18)C11—C10—Cl1119.4 (2)
C4—N1—C13130.3 (2)C9—C10—Cl1119.94 (19)
N1—N2—C6105.50 (18)C10—C11—C12119.3 (2)
C2—C1—H1A109.5C10—C11—H11120.4
C2—C1—H1B109.5C12—C11—H11120.4
H1A—C1—H1B109.5C11—C12—C7122.0 (2)
C2—C1—H1C109.5C11—C12—H12119.0
H1A—C1—H1C109.5C7—C12—H12119.0
H1B—C1—H1C109.5N1—C13—C14114.3 (2)
O2—C2—C1107.8 (2)N1—C13—H13A108.7
O2—C2—H2A110.2C14—C13—H13A108.7
C1—C2—H2A110.2N1—C13—H13B108.7
O2—C2—H2B110.2C14—C13—H13B108.7
C1—C2—H2B110.2H13A—C13—H13B107.6
H2A—C2—H2B108.5O3—C14—C15121.5 (2)
O1—C3—O2123.5 (2)O3—C14—C13121.4 (2)
O1—C3—C4122.6 (2)C15—C14—C13117.1 (2)
O2—C3—C4113.8 (2)C20—C15—C16118.7 (2)
N1—C4—C5106.7 (2)C20—C15—C14119.0 (2)
N1—C4—C3126.4 (2)C16—C15—C14122.3 (2)
C5—C4—C3126.8 (2)C17—C16—C15120.3 (3)
C4—C5—C6105.9 (2)C17—C16—H16119.9
C4—C5—H5127.1C15—C16—H16119.9
C6—C5—H5127.1C18—C17—C16120.2 (3)
N2—C6—C5110.3 (2)C18—C17—H17119.9
N2—C6—C7119.5 (2)C16—C17—H17119.9
C5—C6—C7130.1 (2)C17—C18—C19120.0 (3)
C12—C7—C8117.6 (2)C17—C18—H18120.0
C12—C7—C6120.2 (2)C19—C18—H18120.0
C8—C7—C6122.3 (2)C18—C19—C20120.2 (3)
C9—C8—C7120.8 (2)C18—C19—H19119.9
C9—C8—H8119.6C20—C19—H19119.9
C7—C8—H8119.6C19—C20—C15120.7 (3)
C10—C9—C8119.6 (2)C19—C20—H20119.7
C10—C9—H9120.2C15—C20—H20119.7
C4—N1—N2—C60.1 (3)C7—C8—C9—C10−0.5 (4)
C13—N1—N2—C6−175.2 (2)C8—C9—C10—C111.1 (4)
C3—O2—C2—C1176.2 (3)C8—C9—C10—Cl1−179.8 (2)
C2—O2—C3—O10.3 (4)C9—C10—C11—C12−0.9 (5)
C2—O2—C3—C4−178.7 (2)Cl1—C10—C11—C12−180.0 (2)
N2—N1—C4—C5−0.1 (3)C10—C11—C12—C7−0.1 (5)
C13—N1—C4—C5174.5 (2)C8—C7—C12—C110.7 (4)
N2—N1—C4—C3178.1 (2)C6—C7—C12—C11−178.2 (3)
C13—N1—C4—C3−7.4 (4)N2—N1—C13—C14−100.5 (2)
O1—C3—C4—N1175.6 (3)C4—N1—C13—C1485.2 (3)
O2—C3—C4—N1−5.4 (4)N1—C13—C14—O36.4 (3)
O1—C3—C4—C5−6.6 (4)N1—C13—C14—C15−174.04 (19)
O2—C3—C4—C5172.4 (2)O3—C14—C15—C20−4.0 (4)
N1—C4—C5—C60.1 (3)C13—C14—C15—C20176.4 (2)
C3—C4—C5—C6−178.1 (2)O3—C14—C15—C16176.2 (3)
N1—N2—C6—C50.0 (3)C13—C14—C15—C16−3.4 (4)
N1—N2—C6—C7179.9 (2)C20—C15—C16—C17−0.9 (5)
C4—C5—C6—N20.0 (3)C14—C15—C16—C17178.8 (3)
C4—C5—C6—C7−179.9 (2)C15—C16—C17—C180.4 (5)
N2—C6—C7—C12−3.7 (4)C16—C17—C18—C190.1 (6)
C5—C6—C7—C12176.1 (3)C17—C18—C19—C200.0 (7)
N2—C6—C7—C8177.5 (2)C18—C19—C20—C15−0.5 (6)
C5—C6—C7—C8−2.7 (4)C16—C15—C20—C191.0 (5)
C12—C7—C8—C9−0.4 (4)C14—C15—C20—C19−178.8 (3)
C6—C7—C8—C9178.4 (2)
Cg1 is the centroid of the C7–C12 ring.
D—H···AD—HH···AD···AD—H···A
C5—H5···O1i0.932.523.410 (3)161
C8—H8···O1i0.932.423.348 (4)180
C9—H9···O3ii0.932.563.434 (3)157
C13—H13A···Cg1iii0.972.803.605 (3)140
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C7–C12 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O1i0.932.523.410 (3)161
C8—H8⋯O1i0.932.423.348 (4)180
C9—H9⋯O3ii0.932.563.434 (3)157
C13—H13ACg1iii0.972.803.605 (3)140

Symmetry codes: (i) ; (ii) ; (iii) .

  10 in total

1.  Discovery of a pyrazine in a natural product: tetramethylpyrazine from cultures of a strain of Bacillus subtilis.

Authors:  T KOSUGE; H KAMIYA
Journal:  Nature       Date:  1962-02-24       Impact factor: 49.962

2.  Synthesis of novel oxime-containing pyrazole derivatives and discovery of regulators for apoptosis and autophagy in A549 lung cancer cells.

Authors:  Liang-Wen Zheng; Ying Li; Di Ge; Bao-Xiang Zhao; Ying-Rui Liu; Hong-Shui Lv; Jun Ding; Jun-Ying Miao
Journal:  Bioorg Med Chem Lett       Date:  2010-06-26       Impact factor: 2.823

3.  Synthesis, characterization and antiglaucoma activity of some novel pyrazole derivatives of 5-amino-1,3,4-thiadiazole-2-sulfonamide.

Authors:  Rahmi Kasımoğulları; Metin Bülbül; B Seçkin Arslan; Başak Gökçe
Journal:  Eur J Med Chem       Date:  2010-07-24       Impact factor: 6.514

4.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

5.  Pyrrolo[1,2-a]pyrazine and pyrazolo[1,5-a]pyrazine: novel, potent, and selective series of Vasopressin 1b receptor antagonists.

Authors:  Roberto Arban; Federica Bianchi; Alberto Buson; Susanna Cremonesi; Romano Di Fabio; Gabriella Gentile; Fabrizio Micheli; Alessandra Pasquarello; Alfonso Pozzan; Luca Tarsi; Silvia Terreni; Federica Tonelli
Journal:  Bioorg Med Chem Lett       Date:  2010-07-14       Impact factor: 2.823

6.  Synthesis and pharmacological evaluation of pyrazine N-acylhydrazone derivatives designed as novel analgesic and anti-inflammatory drug candidates.

Authors:  Yolanda Karla Cupertino da Silva; Cristina Villarinho Augusto; Maria Letícia de Castro Barbosa; Gabriela Muniz de Albuquerque Melo; Aline Cavalcanti de Queiroz; Thays de Lima Matos Freire Dias; Walfrido Bispo Júnior; Eliezer J Barreiro; Lídia Moreira Lima; Magna Suzana Alexandre-Moreira
Journal:  Bioorg Med Chem       Date:  2010-06-08       Impact factor: 3.641

7.  Synthesis and in vitro antimicrobial activities of new (cyano-NNO-azoxy)pyrazole derivatives.

Authors:  Donatella Boschi; Stefano Guglielmo; Stefania Aiello; Giulia Morace; Elisa Borghi; Roberta Fruttero
Journal:  Bioorg Med Chem Lett       Date:  2011-04-05       Impact factor: 2.823

8.  Discovery and biological evaluation of potent, selective, orally bioavailable, pyrazine-based blockers of the Na(v)1.8 sodium channel with efficacy in a model of neuropathic pain.

Authors:  Marc J C Scanio; Lei Shi; Irene Drizin; Robert J Gregg; Robert N Atkinson; James B Thomas; Matthew S Johnson; Mark L Chapman; Dong Liu; Michael J Krambis; Yi Liu; Char-Chang Shieh; Xufeng Zhang; Gricelda H Simler; Shailen Joshi; Prisca Honore; Kennan C Marsh; Alison Knox; Stephen Werness; Brett Antonio; Douglas S Krafte; Michael F Jarvis; Connie R Faltynek; Brian E Marron; Michael E Kort
Journal:  Bioorg Med Chem       Date:  2010-09-29       Impact factor: 3.641

9.  Novel pyrazole derivatives: synthesis and evaluation of anti-angiogenic activity.

Authors:  Michael S Christodoulou; Sandra Liekens; Konstantinos M Kasiotis; Serkos A Haroutounian
Journal:  Bioorg Med Chem       Date:  2010-05-20       Impact factor: 3.641

10.  Design, synthesis and structure-activity relationship study of novel pyrazole-based heterocycles as potential antitumor agents.

Authors:  Ahmad M Farag; Korany A K Ali; Taha M A El-Debss; Abdelrahman S Mayhoub; Abdel-Galil E Amr; Naglaa A Abdel-Hafez; Mohamed M Abdulla
Journal:  Eur J Med Chem       Date:  2010-10-01       Impact factor: 6.514

  10 in total

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