Literature DB >> 22090957

4,8-Dimeth-oxy-furo[2,3-b]quinoline (γ-fagarine).

Yong Liu, Kou Wei, Jianshe Yang.   

Abstract

The title mol-ecule, C(13)H(11)NO(3), a natural compound extracted from Phellodendron chinense, exhibits a near planar framework: the mean deviations from the furo[2,3-b]quinoline ring system and from the whole mol-ecule (not including the H atoms) are 0.006 and 0.062 Å, respectively.

Entities:  

Year:  2011        PMID: 22090957      PMCID: PMC3212300          DOI: 10.1107/S1600536811025062

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the anti-HIV properties of furoquinolines, see: Wang et al. (2009 ▶); Cheng et al. (2005 ▶). For a related furoquinoline structure, see: Napolitano et al. (2003 ▶).

Experimental

Crystal data

C13H11NO3 M = 229.23 Orthorhombic, a = 12.491 (5) Å b = 12.155 (5) Å c = 14.466 (5) Å V = 2196.4 (14) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.25 × 0.22 × 0.21 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1998 ▶) T min = 0.976, T max = 0.979 11659 measured reflections 2047 independent reflections 1278 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.129 S = 1.05 2047 reflections 157 parameters H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.12 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811025062/bh2360sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025062/bh2360Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811025062/bh2360Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H11NO3F(000) = 960
Mr = 229.23Dx = 1.386 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 1884 reflections
a = 12.491 (5) Åθ = 2.7–24.2°
b = 12.155 (5) ŵ = 0.10 mm1
c = 14.466 (5) ÅT = 296 K
V = 2196.4 (14) Å3Block, colourless
Z = 80.25 × 0.22 × 0.21 mm
Bruker APEXII CCD diffractometer2047 independent reflections
Radiation source: fine-focus sealed tube1278 reflections with I > 2σ(I)
graphiteRint = 0.068
φ and ω scansθmax = 25.5°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1998)h = −15→13
Tmin = 0.976, Tmax = 0.979k = −13→14
11659 measured reflectionsl = −16→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.129w = 1/[σ2(Fo2) + (0.0376P)2 + 0.5982P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2047 reflectionsΔρmax = 0.14 e Å3
157 parametersΔρmin = −0.12 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.0037 (8)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
C11.0282 (3)0.2044 (2)−0.15171 (19)0.0791 (8)
H11.05590.2307−0.20720.095*
C21.0798 (2)0.21016 (18)−0.07253 (17)0.0654 (7)
H21.14740.2401−0.06270.078*
C31.01087 (17)0.16075 (15)−0.00386 (14)0.0474 (5)
C41.00926 (16)0.13961 (15)0.08969 (14)0.0476 (5)
C50.91729 (17)0.08795 (16)0.12813 (14)0.0484 (5)
C60.9100 (2)0.06319 (18)0.22317 (16)0.0651 (7)
H60.96620.08070.26270.078*
C70.8204 (2)0.0136 (2)0.2568 (2)0.0819 (9)
H70.8159−0.00210.31960.098*
C80.7351 (2)−0.0142 (2)0.1989 (2)0.0835 (9)
H80.6746−0.04800.22330.100*
C90.7403 (2)0.00804 (18)0.1070 (2)0.0684 (7)
C100.83121 (17)0.06121 (16)0.06827 (16)0.0524 (6)
C120.91869 (19)0.12867 (17)−0.05247 (15)0.0544 (6)
C131.18328 (18)0.2155 (2)0.12003 (19)0.0788 (8)
H13A1.21770.16880.07550.118*
H13B1.23030.22690.17160.118*
H13C1.16670.28500.09200.118*
C140.5786 (3)−0.0878 (3)0.0754 (3)0.1463 (17)
H14A0.6090−0.15310.10200.219*
H14B0.5337−0.10760.02420.219*
H14C0.5367−0.05010.12110.219*
N10.83129 (15)0.08188 (15)−0.02441 (14)0.0603 (5)
O10.92925 (15)0.15576 (15)−0.14407 (11)0.0756 (5)
O21.08678 (12)0.16444 (13)0.15127 (10)0.0655 (5)
O30.66204 (14)−0.01773 (15)0.04411 (16)0.0967 (7)
U11U22U33U12U13U23
C10.102 (2)0.0731 (17)0.0625 (18)0.0109 (16)0.0183 (17)0.0169 (14)
C20.0779 (17)0.0560 (14)0.0623 (16)0.0018 (12)0.0185 (14)0.0051 (12)
C30.0573 (13)0.0387 (10)0.0461 (12)0.0039 (9)0.0084 (10)−0.0004 (9)
C40.0533 (13)0.0420 (11)0.0475 (13)0.0008 (9)0.0042 (11)−0.0061 (9)
C50.0569 (13)0.0397 (11)0.0487 (13)0.0001 (10)0.0111 (11)−0.0039 (9)
C60.0844 (18)0.0595 (14)0.0515 (15)−0.0051 (13)0.0160 (13)−0.0006 (11)
C70.109 (2)0.0672 (17)0.0693 (18)−0.0039 (16)0.0394 (18)0.0059 (14)
C80.076 (2)0.0610 (16)0.114 (3)−0.0144 (14)0.0458 (18)−0.0081 (16)
C90.0574 (15)0.0513 (13)0.097 (2)−0.0045 (12)0.0184 (15)−0.0099 (14)
C100.0535 (14)0.0390 (11)0.0647 (16)0.0026 (10)0.0100 (12)−0.0055 (10)
C120.0681 (16)0.0475 (12)0.0476 (14)0.0119 (11)−0.0006 (12)−0.0002 (10)
C130.0597 (15)0.0896 (19)0.0872 (19)−0.0186 (14)0.0017 (14)−0.0050 (15)
C140.097 (2)0.120 (3)0.221 (5)−0.061 (2)0.023 (3)−0.039 (3)
N10.0608 (13)0.0559 (12)0.0641 (14)0.0049 (9)−0.0062 (10)−0.0050 (10)
O10.0975 (14)0.0816 (12)0.0476 (10)0.0149 (10)−0.0040 (10)0.0084 (8)
O20.0644 (10)0.0786 (11)0.0535 (10)−0.0168 (8)0.0009 (8)−0.0068 (8)
O30.0616 (11)0.0872 (13)0.1413 (19)−0.0202 (10)0.0027 (12)−0.0185 (12)
C1—C21.316 (3)C8—C91.358 (4)
C1—O11.375 (3)C8—H80.9300
C1—H10.9300C9—O31.372 (3)
C2—C31.446 (3)C9—C101.422 (3)
C2—H20.9300C10—N11.364 (3)
C3—C41.378 (3)C12—N11.296 (3)
C3—C121.404 (3)C12—O11.372 (3)
C4—O21.350 (2)C13—O21.429 (3)
C4—C51.422 (3)C13—H13A0.9600
C5—C61.410 (3)C13—H13B0.9600
C5—C101.418 (3)C13—H13C0.9600
C6—C71.361 (3)C14—O31.420 (3)
C6—H60.9300C14—H14A0.9600
C7—C81.397 (4)C14—H14B0.9600
C7—H70.9300C14—H14C0.9600
C2—C1—O1113.2 (2)C8—C9—C10120.9 (3)
C2—C1—H1123.4O3—C9—C10114.3 (2)
O1—C1—H1123.4N1—C10—C5123.87 (19)
C1—C2—C3106.5 (2)N1—C10—C9118.1 (2)
C1—C2—H2126.7C5—C10—C9118.0 (2)
C3—C2—H2126.7N1—C12—O1119.3 (2)
C4—C3—C12115.35 (19)N1—C12—C3131.0 (2)
C4—C3—C2139.6 (2)O1—C12—C3109.8 (2)
C12—C3—C2105.1 (2)O2—C13—H13A109.5
O2—C4—C3126.58 (19)O2—C13—H13B109.5
O2—C4—C5114.85 (19)H13A—C13—H13B109.5
C3—C4—C5118.56 (19)O2—C13—H13C109.5
C6—C5—C10119.8 (2)H13A—C13—H13C109.5
C6—C5—C4121.8 (2)H13B—C13—H13C109.5
C10—C5—C4118.35 (19)O3—C14—H14A109.5
C7—C6—C5119.7 (2)O3—C14—H14B109.5
C7—C6—H6120.1H14A—C14—H14B109.5
C5—C6—H6120.1O3—C14—H14C109.5
C6—C7—C8121.3 (3)H14A—C14—H14C109.5
C6—C7—H7119.3H14B—C14—H14C109.5
C8—C7—H7119.3C12—N1—C10112.91 (19)
C9—C8—C7120.2 (2)C12—O1—C1105.51 (19)
C9—C8—H8119.9C4—O2—C13119.57 (18)
C7—C8—H8119.9C9—O3—C14116.6 (3)
C8—C9—O3124.8 (2)
O1—C1—C2—C30.2 (3)C4—C5—C10—C9179.04 (18)
C1—C2—C3—C4−178.6 (2)C8—C9—C10—N1−179.6 (2)
C1—C2—C3—C12−0.2 (2)O3—C9—C10—N10.7 (3)
C12—C3—C4—O2−178.62 (18)C8—C9—C10—C51.4 (3)
C2—C3—C4—O2−0.3 (4)O3—C9—C10—C5−178.24 (18)
C12—C3—C4—C50.4 (3)C4—C3—C12—N1−0.1 (3)
C2—C3—C4—C5178.7 (2)C2—C3—C12—N1−179.0 (2)
O2—C4—C5—C6−1.2 (3)C4—C3—C12—O1178.92 (17)
C3—C4—C5—C6179.67 (19)C2—C3—C12—O10.1 (2)
O2—C4—C5—C10178.73 (17)O1—C12—N1—C10−179.06 (18)
C3—C4—C5—C10−0.4 (3)C3—C12—N1—C10−0.1 (3)
C10—C5—C6—C70.1 (3)C5—C10—N1—C120.1 (3)
C4—C5—C6—C7−179.9 (2)C9—C10—N1—C12−178.82 (18)
C5—C6—C7—C80.4 (4)N1—C12—O1—C1179.27 (19)
C6—C7—C8—C90.0 (4)C3—C12—O1—C10.1 (2)
C7—C8—C9—O3178.7 (2)C2—C1—O1—C12−0.2 (3)
C7—C8—C9—C10−1.0 (4)C3—C4—O2—C13−1.7 (3)
C6—C5—C10—N1−179.89 (19)C5—C4—O2—C13179.32 (19)
C4—C5—C10—N10.2 (3)C8—C9—O3—C14−10.6 (4)
C6—C5—C10—C9−1.0 (3)C10—C9—O3—C14169.1 (2)
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