| Literature DB >> 22090927 |
Abstract
In the title compound, C(23)H(19)N(8)O(+)·BF(4) (-), one pyridine N atom is protonated. Two intra-molecular N-H⋯N hydrogen bonds occur. In the crystal, inter-molecular N-H⋯N hydrogen bond links neighboring C(23)H(19)N(8)O(+) units into cyclic supra-molecular dimers while C-H⋯O hydrogen bonds link the C(23)H(19)N(8)O(+) units into a two-dimensional supra-molecular network structure.Entities:
Year: 2011 PMID: 22090927 PMCID: PMC3212270 DOI: 10.1107/S1600536811025359
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C23H19N8O+·BF4− | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3505 reflections | |
| θ = 2.3–26.7° | |
| µ = 0.12 mm−1 | |
| α = 90.03 (3)° | |
| β = 91.50 (3)° | Block, colorless |
| γ = 97.85 (3)° | 0.22 × 0.19 × 0.16 mm |
| Bruker APEXII CCD area-detector diffractometer | 5175 independent reflections |
| Radiation source: fine-focus sealed tube | 4025 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 18299 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5175 reflections | (Δ/σ)max < 0.001 |
| 346 parameters | Δρmax = 0.68 e Å−3 |
| 0 restraints | Δρmin = −0.49 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| H1 | −0.020 (3) | 0.896 (2) | 0.6632 (16) | 0.033 (6)* | |
| H30 | 0.224 (3) | 0.592 (2) | 0.5650 (17) | 0.041 (6)* | |
| H40 | 0.141 (3) | 0.567 (2) | 0.3285 (17) | 0.038 (6)* | |
| O1 | 0.07813 (16) | 0.75955 (10) | 0.40804 (8) | 0.0215 (3) | |
| N1 | 0.05189 (17) | 0.93425 (12) | 0.70991 (9) | 0.0151 (3) | |
| N2 | 0.16150 (16) | 0.75693 (12) | 0.60077 (9) | 0.0149 (3) | |
| N3 | 0.17522 (17) | 0.65646 (12) | 0.54249 (9) | 0.0147 (3) | |
| N4 | 0.16693 (18) | 0.56751 (12) | 0.38758 (10) | 0.0164 (3) | |
| N6 | 0.15116 (17) | 0.43582 (12) | 0.22247 (9) | 0.0178 (3) | |
| N7 | 0.20613 (16) | 0.14392 (12) | 0.42932 (9) | 0.0154 (3) | |
| N8 | 0.32921 (18) | 0.55934 (13) | 0.69471 (10) | 0.0210 (3) | |
| N5 | 0.21894 (16) | 0.46491 (12) | 0.43220 (9) | 0.0147 (3) | |
| C13 | 0.24217 (19) | 0.36556 (14) | 0.38154 (11) | 0.0143 (3) | |
| C8 | 0.27284 (19) | 0.65124 (14) | 0.74875 (11) | 0.0163 (3) | |
| C19 | 0.22420 (19) | 0.34758 (14) | 0.27322 (11) | 0.0152 (3) | |
| C14 | 0.29165 (19) | 0.26067 (14) | 0.44455 (11) | 0.0142 (3) | |
| C20 | 0.2835 (2) | 0.24569 (15) | 0.22615 (12) | 0.0193 (3) | |
| H20 | 0.3378 | 0.1878 | 0.2621 | 0.023* | |
| C15 | 0.4159 (2) | 0.28667 (15) | 0.51871 (11) | 0.0175 (3) | |
| H15 | 0.4729 | 0.3685 | 0.5276 | 0.021* | |
| C5 | 0.2903 (2) | 0.93506 (16) | 0.81632 (12) | 0.0219 (4) | |
| H5 | 0.3817 | 0.8971 | 0.8408 | 0.026* | |
| C1 | 0.13426 (19) | 0.66862 (14) | 0.44403 (11) | 0.0152 (3) | |
| C16 | 0.4535 (2) | 0.18811 (15) | 0.57937 (11) | 0.0185 (3) | |
| H16 | 0.5366 | 0.2026 | 0.6291 | 0.022* | |
| C6 | 0.1830 (2) | 0.87492 (14) | 0.74368 (11) | 0.0158 (3) | |
| C17 | 0.3646 (2) | 0.06836 (15) | 0.56384 (11) | 0.0183 (3) | |
| H17 | 0.3867 | 0.0008 | 0.6033 | 0.022* | |
| C9 | 0.2753 (2) | 0.64769 (16) | 0.85125 (12) | 0.0207 (3) | |
| H9 | 0.2326 | 0.7102 | 0.8871 | 0.025* | |
| C18 | 0.2421 (2) | 0.05004 (14) | 0.48887 (11) | 0.0174 (3) | |
| H18 | 0.1821 | −0.0308 | 0.4794 | 0.021* | |
| C7 | 0.20552 (19) | 0.75424 (14) | 0.69332 (11) | 0.0151 (3) | |
| C12 | 0.3918 (2) | 0.46578 (17) | 0.74277 (13) | 0.0261 (4) | |
| H12 | 0.4309 | 0.4025 | 0.7059 | 0.031* | |
| C2 | 0.0211 (2) | 1.04672 (15) | 0.74398 (12) | 0.0208 (3) | |
| H2 | −0.0712 | 1.0831 | 0.7189 | 0.025* | |
| C23 | 0.1328 (2) | 0.42228 (16) | 0.12492 (12) | 0.0218 (4) | |
| H23 | 0.0845 | 0.4838 | 0.0896 | 0.026* | |
| C22 | 0.1824 (2) | 0.32125 (17) | 0.07416 (12) | 0.0245 (4) | |
| H22 | 0.1634 | 0.3135 | 0.0066 | 0.029* | |
| C10 | 0.3423 (2) | 0.54963 (16) | 0.89862 (12) | 0.0237 (4) | |
| H10 | 0.3467 | 0.5465 | 0.9669 | 0.028* | |
| C11 | 0.4023 (2) | 0.45699 (16) | 0.84425 (13) | 0.0254 (4) | |
| H11 | 0.4485 | 0.3905 | 0.8745 | 0.030* | |
| C21 | 0.2605 (2) | 0.23194 (16) | 0.12549 (12) | 0.0239 (4) | |
| H21 | 0.2970 | 0.1639 | 0.0930 | 0.029* | |
| C3 | 0.1261 (2) | 1.10889 (17) | 0.81633 (13) | 0.0276 (4) | |
| H3 | 0.1061 | 1.1874 | 0.8401 | 0.033* | |
| C4 | 0.2611 (2) | 1.05221 (18) | 0.85257 (13) | 0.0284 (4) | |
| H4 | 0.3330 | 1.0925 | 0.9015 | 0.034* | |
| B1 | 0.2959 (3) | 0.8076 (2) | 0.10945 (17) | 0.0306 (5) | |
| F1 | 0.3407 (2) | 0.7618 (2) | 0.20065 (11) | 0.0788 (5) | |
| F2 | 0.42071 (15) | 0.78336 (12) | 0.04479 (8) | 0.0381 (3) | |
| F3 | 0.14286 (17) | 0.73994 (14) | 0.07990 (12) | 0.0618 (4) | |
| F4 | 0.2908 (2) | 0.93300 (14) | 0.11734 (17) | 0.0898 (7) |
| O1 | 0.0329 (7) | 0.0149 (6) | 0.0180 (6) | 0.0091 (5) | −0.0041 (5) | −0.0001 (4) |
| N1 | 0.0181 (7) | 0.0144 (6) | 0.0127 (6) | 0.0024 (5) | −0.0015 (5) | −0.0014 (5) |
| N2 | 0.0157 (6) | 0.0142 (6) | 0.0147 (6) | 0.0021 (5) | 0.0002 (5) | −0.0019 (5) |
| N3 | 0.0194 (7) | 0.0118 (6) | 0.0135 (6) | 0.0049 (5) | −0.0013 (5) | −0.0010 (5) |
| N4 | 0.0245 (7) | 0.0134 (6) | 0.0120 (6) | 0.0052 (5) | −0.0028 (5) | −0.0002 (5) |
| N6 | 0.0194 (7) | 0.0182 (7) | 0.0157 (6) | 0.0022 (5) | −0.0008 (5) | −0.0007 (5) |
| N7 | 0.0172 (6) | 0.0135 (6) | 0.0157 (6) | 0.0031 (5) | 0.0009 (5) | −0.0016 (5) |
| N8 | 0.0269 (8) | 0.0194 (7) | 0.0181 (7) | 0.0082 (6) | −0.0022 (6) | −0.0005 (5) |
| N5 | 0.0164 (6) | 0.0116 (6) | 0.0160 (6) | 0.0017 (5) | −0.0014 (5) | 0.0013 (5) |
| C13 | 0.0139 (7) | 0.0139 (7) | 0.0147 (7) | 0.0008 (6) | −0.0005 (6) | −0.0006 (6) |
| C8 | 0.0141 (7) | 0.0181 (8) | 0.0165 (7) | 0.0019 (6) | −0.0017 (6) | 0.0001 (6) |
| C19 | 0.0150 (7) | 0.0151 (7) | 0.0147 (7) | −0.0008 (6) | 0.0006 (6) | −0.0001 (6) |
| C14 | 0.0158 (7) | 0.0130 (7) | 0.0145 (7) | 0.0037 (6) | 0.0028 (6) | −0.0017 (5) |
| C20 | 0.0224 (8) | 0.0177 (8) | 0.0180 (8) | 0.0028 (6) | 0.0036 (6) | 0.0002 (6) |
| C15 | 0.0176 (8) | 0.0151 (7) | 0.0194 (8) | 0.0012 (6) | −0.0011 (6) | −0.0011 (6) |
| C5 | 0.0204 (8) | 0.0261 (9) | 0.0191 (8) | 0.0040 (7) | −0.0034 (6) | −0.0050 (6) |
| C1 | 0.0165 (7) | 0.0138 (7) | 0.0150 (7) | 0.0015 (6) | −0.0007 (6) | −0.0008 (6) |
| C16 | 0.0180 (8) | 0.0226 (8) | 0.0158 (7) | 0.0058 (6) | −0.0024 (6) | −0.0003 (6) |
| C6 | 0.0167 (7) | 0.0172 (7) | 0.0135 (7) | 0.0025 (6) | 0.0015 (6) | −0.0004 (6) |
| C17 | 0.0205 (8) | 0.0181 (8) | 0.0175 (7) | 0.0064 (6) | 0.0025 (6) | 0.0050 (6) |
| C9 | 0.0222 (8) | 0.0231 (8) | 0.0172 (8) | 0.0049 (7) | 0.0000 (6) | 0.0001 (6) |
| C18 | 0.0199 (8) | 0.0130 (7) | 0.0196 (8) | 0.0028 (6) | 0.0027 (6) | −0.0007 (6) |
| C7 | 0.0139 (7) | 0.0157 (7) | 0.0158 (7) | 0.0020 (6) | 0.0008 (6) | −0.0005 (6) |
| C12 | 0.0361 (10) | 0.0214 (8) | 0.0229 (9) | 0.0128 (7) | −0.0034 (7) | −0.0009 (7) |
| C2 | 0.0259 (9) | 0.0180 (8) | 0.0196 (8) | 0.0070 (6) | 0.0004 (7) | −0.0017 (6) |
| C23 | 0.0246 (9) | 0.0244 (8) | 0.0159 (8) | 0.0025 (7) | −0.0027 (6) | 0.0009 (6) |
| C22 | 0.0321 (10) | 0.0275 (9) | 0.0125 (8) | −0.0011 (7) | 0.0006 (7) | −0.0027 (6) |
| C10 | 0.0281 (9) | 0.0266 (9) | 0.0158 (8) | 0.0020 (7) | −0.0031 (7) | 0.0044 (6) |
| C11 | 0.0306 (9) | 0.0218 (8) | 0.0246 (9) | 0.0080 (7) | −0.0058 (7) | 0.0057 (7) |
| C21 | 0.0310 (9) | 0.0212 (8) | 0.0195 (8) | 0.0024 (7) | 0.0068 (7) | −0.0050 (6) |
| C3 | 0.0351 (10) | 0.0214 (9) | 0.0266 (9) | 0.0056 (7) | −0.0011 (8) | −0.0122 (7) |
| C4 | 0.0287 (9) | 0.0302 (9) | 0.0252 (9) | 0.0013 (7) | −0.0055 (7) | −0.0130 (7) |
| B1 | 0.0283 (11) | 0.0281 (11) | 0.0357 (12) | 0.0049 (9) | −0.0021 (9) | −0.0079 (9) |
| F1 | 0.0849 (13) | 0.1169 (15) | 0.0361 (8) | 0.0202 (11) | −0.0023 (8) | 0.0033 (9) |
| F2 | 0.0329 (6) | 0.0449 (7) | 0.0360 (6) | 0.0037 (5) | −0.0016 (5) | −0.0140 (5) |
| F3 | 0.0313 (7) | 0.0607 (9) | 0.0918 (12) | 0.0014 (6) | −0.0033 (7) | −0.0231 (8) |
| F4 | 0.0708 (12) | 0.0280 (8) | 0.174 (2) | 0.0124 (7) | 0.0381 (12) | −0.0134 (10) |
| O1—C1 | 1.2157 (18) | C5—C4 | 1.389 (2) |
| N1—C2 | 1.337 (2) | C5—H5 | 0.9300 |
| N1—C6 | 1.357 (2) | C16—C17 | 1.381 (2) |
| N1—H1 | 0.90 (2) | C16—H16 | 0.9300 |
| N2—C7 | 1.301 (2) | C6—C7 | 1.488 (2) |
| N2—N3 | 1.3481 (18) | C17—C18 | 1.385 (2) |
| N3—C1 | 1.3820 (19) | C17—H17 | 0.9300 |
| N3—H30 | 0.89 (2) | C9—C10 | 1.385 (2) |
| N4—N5 | 1.3557 (17) | C9—H9 | 0.9300 |
| N4—C1 | 1.378 (2) | C18—H18 | 0.9300 |
| N4—H40 | 0.82 (2) | C12—C11 | 1.387 (2) |
| N6—C23 | 1.339 (2) | C12—H12 | 0.9300 |
| N6—C19 | 1.349 (2) | C2—C3 | 1.380 (2) |
| N7—C18 | 1.3418 (19) | C2—H2 | 0.9300 |
| N7—C14 | 1.343 (2) | C23—C22 | 1.383 (2) |
| N8—C12 | 1.335 (2) | C23—H23 | 0.9300 |
| N8—C8 | 1.353 (2) | C22—C21 | 1.383 (2) |
| N5—C13 | 1.297 (2) | C22—H22 | 0.9300 |
| C13—C19 | 1.489 (2) | C10—C11 | 1.374 (3) |
| C13—C14 | 1.495 (2) | C10—H10 | 0.9300 |
| C8—C9 | 1.396 (2) | C11—H11 | 0.9300 |
| C8—C7 | 1.480 (2) | C21—H21 | 0.9300 |
| C19—C20 | 1.399 (2) | C3—C4 | 1.378 (3) |
| C14—C15 | 1.392 (2) | C3—H3 | 0.9300 |
| C20—C21 | 1.384 (2) | C4—H4 | 0.9300 |
| C20—H20 | 0.9300 | B1—F4 | 1.342 (3) |
| C15—C16 | 1.393 (2) | B1—F3 | 1.373 (3) |
| C15—H15 | 0.9300 | B1—F1 | 1.390 (3) |
| C5—C6 | 1.384 (2) | B1—F2 | 1.391 (3) |
| C2—N1—C6 | 123.20 (14) | C16—C17—H17 | 120.4 |
| C2—N1—H1 | 117.6 (14) | C18—C17—H17 | 120.4 |
| C6—N1—H1 | 119.2 (14) | C10—C9—C8 | 118.98 (15) |
| C7—N2—N3 | 120.02 (13) | C10—C9—H9 | 120.5 |
| N2—N3—C1 | 116.77 (13) | C8—C9—H9 | 120.5 |
| N2—N3—H30 | 120.6 (15) | N7—C18—C17 | 122.81 (14) |
| C1—N3—H30 | 121.9 (15) | N7—C18—H18 | 118.6 |
| N5—N4—C1 | 119.28 (13) | C17—C18—H18 | 118.6 |
| N5—N4—H40 | 121.7 (16) | N2—C7—C8 | 128.54 (14) |
| C1—N4—H40 | 118.4 (16) | N2—C7—C6 | 111.30 (13) |
| C23—N6—C19 | 118.19 (14) | C8—C7—C6 | 120.15 (13) |
| C18—N7—C14 | 118.10 (13) | N8—C12—C11 | 124.13 (16) |
| C12—N8—C8 | 117.68 (14) | N8—C12—H12 | 117.9 |
| C13—N5—N4 | 120.72 (13) | C11—C12—H12 | 117.9 |
| N5—C13—C19 | 127.73 (14) | N1—C2—C3 | 120.10 (16) |
| N5—C13—C14 | 112.55 (13) | N1—C2—H2 | 119.9 |
| C19—C13—C14 | 119.72 (13) | C3—C2—H2 | 119.9 |
| N8—C8—C9 | 121.70 (14) | N6—C23—C22 | 123.18 (16) |
| N8—C8—C7 | 116.38 (13) | N6—C23—H23 | 118.4 |
| C9—C8—C7 | 121.90 (14) | C22—C23—H23 | 118.4 |
| N6—C19—C20 | 121.65 (14) | C21—C22—C23 | 118.89 (15) |
| N6—C19—C13 | 116.70 (13) | C21—C22—H22 | 120.6 |
| C20—C19—C13 | 121.63 (14) | C23—C22—H22 | 120.6 |
| N7—C14—C15 | 122.42 (14) | C11—C10—C9 | 119.63 (15) |
| N7—C14—C13 | 117.28 (13) | C11—C10—H10 | 120.2 |
| C15—C14—C13 | 120.22 (13) | C9—C10—H10 | 120.2 |
| C21—C20—C19 | 119.31 (15) | C10—C11—C12 | 117.84 (15) |
| C21—C20—H20 | 120.3 | C10—C11—H11 | 121.1 |
| C19—C20—H20 | 120.3 | C12—C11—H11 | 121.1 |
| C14—C15—C16 | 118.96 (14) | C22—C21—C20 | 118.71 (15) |
| C14—C15—H15 | 120.5 | C22—C21—H21 | 120.6 |
| C16—C15—H15 | 120.5 | C20—C21—H21 | 120.6 |
| C6—C5—C4 | 119.88 (16) | C4—C3—C2 | 118.64 (16) |
| C6—C5—H5 | 120.1 | C4—C3—H3 | 120.7 |
| C4—C5—H5 | 120.1 | C2—C3—H3 | 120.7 |
| O1—C1—N4 | 121.74 (14) | C3—C4—C5 | 120.25 (16) |
| O1—C1—N3 | 124.77 (14) | C3—C4—H4 | 119.9 |
| N4—C1—N3 | 113.48 (13) | C5—C4—H4 | 119.9 |
| C17—C16—C15 | 118.44 (14) | F4—B1—F3 | 113.43 (19) |
| C17—C16—H16 | 120.8 | F4—B1—F1 | 108.7 (2) |
| C15—C16—H16 | 120.8 | F3—B1—F1 | 107.76 (19) |
| N1—C6—C5 | 117.93 (14) | F4—B1—F2 | 110.79 (19) |
| N1—C6—C7 | 116.20 (13) | F3—B1—F2 | 108.98 (17) |
| C5—C6—C7 | 125.70 (14) | F1—B1—F2 | 106.95 (17) |
| C16—C17—C18 | 119.25 (14) |
| H··· | ||||
| N1—H1···N7i | 0.90 (2) | 1.92 (2) | 2.792 (2) | 163.5 (15) |
| N3—H30···N8 | 0.88 (2) | 1.99 (2) | 2.658 (2) | 132.1 (19) |
| N4—H40···N6 | 0.83 (2) | 2.02 (2) | 2.640 (2) | 132 (2) |
| C2—H2···O1ii | 0.93 | 2.41 | 3.083 (2) | 129.(1) |
| C18—H18···O1iii | 0.93 | 2.46 | 3.355 (2) | 162.(1) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N7i | 0.90 (2) | 1.92 (2) | 2.792 (2) | 163.5 (15) |
| N3—H30⋯N8 | 0.88 (2) | 1.99 (2) | 2.658 (2) | 132.1 (19) |
| N4—H40⋯N6 | 0.83 (2) | 2.02 (2) | 2.640 (2) | 132 (2) |
| C2—H2⋯O1ii | 0.93 | 2.41 | 3.083 (2) | 129 (1) |
| C18—H18⋯O1iii | 0.93 | 2.46 | 3.355 (2) | 162 (1) |
Symmetry codes: (i) ; (ii) ; (iii) .