Literature DB >> 22090866

Tetra-kis(2-amino-4-methyl-pyridinium) cyclo-tetra-μ(2)-oxido-tetra-kis-[dioxido-vanadate(V)] tetra-hydrate.

Masoumeh Tabatabaee, Ghasem Ahadiat, Krešimir Molčanov.   

Abstract

The asymmetric unit of the title compound, (C(6)H(9)N(2))(4)[V(4)O(12)]·4H(2)O, contains half of a [V(4)O(12)](4-) anion, two 2-amino-4-methyl-pyridinium, (2a4mpH)(+), cations and two water mol-ecules. One water mol-ecule is disordered over two sets of sites with equal occupancies and the H atoms for this mol-ecule were not included in the refinement. The cation lies on an inversion center with four tetra-hedral VO(4) units each sharing two vertices, forming an eight-membered ring. In the crystal, the components are linked by inter-molecular N-H⋯O hydrogen bonds, forming a one-dimensional network along [100]. Further stabilization is provided by weak inter-molecular C-H⋯O hydrogen bonds. In addition, π-π stacking inter-actions with centroid-centroid distances of 3.5420 (18), 3.7577 (18) and 3.6311 (19) Å are observed.

Entities:  

Year:  2011        PMID: 22090866      PMCID: PMC3212164          DOI: 10.1107/S1600536811026912

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Paredes-García et al. (2008) ▶; Nakano et al. (2002 ▶).

Experimental

Crystal data

(C6H9N2)4[V4O12]·4H2O M = 900.39 Triclinic, a = 7.8739 (3) Å b = 11.1880 (5) Å c = 11.7618 (6) Å α = 73.609 (4)° β = 76.945 (4)° γ = 79.342 (4)° V = 960.15 (7) Å3 Z = 1 Cu Kα radiation μ = 8.59 mm−1 T = 293 K 0.15 × 0.15 × 0.10 mm

Data collection

Oxford Diffraction Xcalibur Nova R diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007 ▶) T min = 0.518, T max = 1 8031 measured reflections 3932 independent reflections 3371 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.129 S = 1.05 3932 reflections 250 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007) ▶; cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999) ▶. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811026912/lh5277sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811026912/lh5277Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C6H9N2)4[V4O12]·4H2OZ = 1
Mr = 900.39F(000) = 332
Triclinic, P1Dx = 1.557 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54179 Å
a = 7.8739 (3) ÅCell parameters from 4890 reflections
b = 11.1880 (5) Åθ = 4.0–75.8°
c = 11.7618 (6) ŵ = 8.59 mm1
α = 73.609 (4)°T = 293 K
β = 76.945 (4)°Prism, pale yellow
γ = 79.342 (4)°0.15 × 0.15 × 0.10 mm
V = 960.15 (7) Å3
Oxford Diffraction Xcalibur Nova R diffractometer3932 independent reflections
graphite3371 reflections with I > 2σ(I)
Detector resolution: 10.4323 pixels mm-1Rint = 0.033
ω scansθmax = 76.0°, θmin = 4.0°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007)h = −9→9
Tmin = 0.518, Tmax = 1k = −13→13
8031 measured reflectionsl = −14→11
Refinement on F23 restraints
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.044w = 1/[σ2(Fo2) + (0.085P)2 + 0.0501P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.129(Δ/σ)max = 0.001
S = 1.05Δρmax = 0.47 e Å3
3932 reflectionsΔρmin = −0.33 e Å3
250 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
V20.96401 (5)0.16480 (4)0.30891 (4)0.04115 (14)
V10.95947 (5)−0.13283 (4)0.42124 (4)0.03986 (14)
O10.9714 (3)−0.24965 (19)0.3592 (2)0.0530 (5)
O21.0932 (2)−0.17853 (19)0.53675 (18)0.0498 (4)
O30.7553 (3)−0.0950 (2)0.4789 (2)0.0589 (5)
O41.0430 (2)0.00128 (17)0.30665 (17)0.0473 (4)
O50.7916 (3)0.2148 (2)0.2444 (2)0.0575 (5)
O61.1255 (3)0.2451 (2)0.2325 (2)0.0600 (5)
C10.5148 (3)0.6860 (2)0.4084 (2)0.0446 (5)
C20.3830 (4)0.6228 (3)0.3964 (3)0.0489 (6)
H20.26630.6450.42920.059*
C30.4245 (5)0.5298 (3)0.3373 (3)0.0577 (7)
C40.6019 (5)0.4953 (3)0.2905 (3)0.0647 (8)
H40.63330.43110.25090.078*
C50.7261 (4)0.5561 (3)0.3034 (3)0.0620 (7)
H50.84320.5340.27140.074*
C60.2802 (6)0.4652 (4)0.3238 (4)0.0836 (12)
H6C0.33080.40220.28050.125*
H6A0.19940.5260.28010.125*
H6B0.21880.42640.40210.125*
N10.6839 (3)0.6492 (2)0.3625 (2)0.0497 (5)
H10.76620.68530.37080.06*
N20.4799 (3)0.7794 (2)0.4625 (2)0.0547 (6)
H2A0.56420.81550.46790.066*
H2B0.37310.80380.49210.066*
C70.5200 (4)1.0124 (3)0.2050 (3)0.0523 (6)
C80.6928 (4)0.9673 (3)0.1585 (3)0.0521 (6)
H80.78631.00160.16770.062*
C90.7251 (4)0.8738 (3)0.1000 (3)0.0563 (7)
C100.5819 (5)0.8220 (3)0.0874 (3)0.0622 (7)
H100.60110.75920.04660.075*
C110.4163 (4)0.8645 (3)0.1352 (3)0.0601 (7)
H110.32170.82950.12870.072*
C120.9095 (5)0.8251 (4)0.0517 (4)0.0783 (10)
H12B0.90780.76020.01330.117*
H12A0.97340.79140.11670.117*
H12C0.96560.8924−0.00610.117*
N30.3879 (3)0.9573 (3)0.1922 (2)0.0559 (6)
H30.28150.98270.22180.067*
N40.4820 (4)1.1037 (3)0.2601 (3)0.0750 (8)
H4A0.37431.12810.28780.09*
H4B0.56491.13910.26860.09*
O90.3335 (12)0.6497 (8)−0.0146 (6)0.186 (3)
O70.0661 (13)0.4852 (7)0.0806 (8)0.121 (3)0.5
O80.754 (2)0.5676 (10)−0.0400 (7)0.191 (7)0.5
H9A0.255 (15)0.616 (10)−0.047 (11)0.3*
H9B0.385 (17)0.573 (7)0.037 (10)0.3*
U11U22U33U12U13U23
V20.0395 (2)0.0430 (2)0.0433 (2)−0.00904 (16)−0.01011 (16)−0.01024 (17)
V10.0361 (2)0.0433 (2)0.0449 (2)−0.00975 (15)−0.00796 (16)−0.01537 (17)
O10.0542 (10)0.0535 (10)0.0622 (12)−0.0098 (8)−0.0159 (9)−0.0259 (9)
O20.0471 (9)0.0566 (10)0.0500 (10)−0.0079 (8)−0.0129 (8)−0.0164 (8)
O30.0415 (9)0.0704 (13)0.0701 (13)−0.0124 (8)−0.0044 (9)−0.0273 (11)
O40.0453 (9)0.0458 (9)0.0518 (10)−0.0089 (7)−0.0060 (7)−0.0141 (8)
O50.0538 (11)0.0611 (12)0.0635 (12)−0.0017 (9)−0.0250 (9)−0.0175 (10)
O60.0578 (11)0.0601 (12)0.0615 (12)−0.0238 (9)−0.0071 (9)−0.0069 (10)
C10.0447 (12)0.0455 (12)0.0445 (12)−0.0119 (9)−0.0129 (10)−0.0050 (10)
C20.0446 (12)0.0478 (13)0.0556 (15)−0.0120 (10)−0.0164 (11)−0.0057 (11)
C30.0701 (17)0.0508 (14)0.0603 (17)−0.0165 (13)−0.0298 (14)−0.0074 (13)
C40.082 (2)0.0559 (16)0.0640 (18)−0.0073 (15)−0.0203 (16)−0.0231 (14)
C50.0563 (16)0.0669 (18)0.0613 (18)−0.0024 (13)−0.0081 (13)−0.0192 (15)
C60.103 (3)0.071 (2)0.098 (3)−0.033 (2)−0.049 (2)−0.018 (2)
N10.0434 (11)0.0548 (12)0.0530 (13)−0.0138 (9)−0.0096 (9)−0.0113 (10)
N20.0443 (11)0.0592 (13)0.0667 (15)−0.0142 (9)−0.0080 (10)−0.0224 (12)
C70.0422 (13)0.0661 (16)0.0475 (14)−0.0106 (11)−0.0094 (10)−0.0095 (12)
C80.0453 (13)0.0668 (17)0.0436 (13)−0.0120 (11)−0.0086 (10)−0.0097 (12)
C90.0547 (15)0.0694 (18)0.0410 (13)−0.0093 (13)−0.0070 (11)−0.0086 (12)
C100.0710 (19)0.0665 (18)0.0530 (16)−0.0120 (15)−0.0173 (14)−0.0147 (14)
C110.0597 (16)0.0683 (18)0.0555 (16)−0.0216 (14)−0.0220 (13)−0.0033 (14)
C120.066 (2)0.097 (3)0.069 (2)−0.0061 (18)0.0031 (17)−0.032 (2)
N30.0404 (11)0.0698 (15)0.0544 (13)−0.0123 (10)−0.0082 (9)−0.0077 (11)
N40.0472 (13)0.090 (2)0.097 (2)−0.0088 (13)−0.0057 (14)−0.0436 (19)
O90.225 (8)0.230 (8)0.116 (4)−0.091 (6)−0.042 (4)−0.016 (5)
O70.161 (8)0.072 (4)0.101 (6)−0.012 (4)−0.004 (5)0.007 (4)
O80.38 (2)0.118 (7)0.071 (5)−0.122 (11)0.017 (8)−0.006 (5)
V2—O51.636 (2)N2—H2A0.86
V2—O61.637 (2)N2—H2B0.86
V2—O2i1.812 (2)C7—N41.314 (4)
V2—O41.8258 (18)C7—N31.358 (4)
V1—O31.625 (2)C7—C81.404 (4)
V1—O11.6467 (19)C8—C91.364 (5)
V1—O21.809 (2)C8—H80.93
V1—O41.8232 (19)C9—C101.414 (5)
O2—V2i1.812 (2)C9—C121.495 (5)
C1—N21.328 (4)C10—C111.353 (5)
C1—N11.353 (4)C10—H100.93
C1—C21.411 (4)C11—N31.349 (5)
C2—C31.361 (4)C11—H110.93
C2—H20.93C12—H12B0.96
C3—C41.406 (5)C12—H12A0.96
C3—C61.513 (4)C12—H12C0.96
C4—C51.346 (5)N3—H30.86
C4—H40.93N4—H4A0.86
C5—N11.362 (4)N4—H4B0.86
C5—H50.93O9—H9A0.97 (2)
C6—H6C0.96O9—H9B0.98 (2)
C6—H6A0.96O7—O8ii1.460 (18)
C6—H6B0.96O8—O7ii1.460 (18)
N1—H10.86
O5—V2—O6109.93 (12)C1—N1—C5121.2 (3)
O5—V2—O2i109.51 (10)C1—N1—H1119.4
O6—V2—O2i111.16 (11)C5—N1—H1119.4
O5—V2—O4110.27 (10)C1—N2—H2A120
O6—V2—O4106.15 (10)C1—N2—H2B120
O2i—V2—O4109.79 (9)H2A—N2—H2B120
O3—V1—O1108.79 (11)N4—C7—N3119.4 (3)
O3—V1—O2110.32 (11)N4—C7—C8123.0 (3)
O1—V1—O2110.20 (10)N3—C7—C8117.5 (3)
O3—V1—O4110.02 (11)C9—C8—C7120.8 (3)
O1—V1—O4109.41 (10)C9—C8—H8119.6
O2—V1—O4108.10 (9)C7—C8—H8119.6
V1—O2—V2i129.30 (11)C8—C9—C10119.0 (3)
V1—O4—V2123.94 (10)C8—C9—C12120.7 (3)
N2—C1—N1118.9 (2)C10—C9—C12120.3 (3)
N2—C1—C2122.9 (3)C11—C10—C9119.4 (3)
N1—C1—C2118.2 (3)C11—C10—H10120.3
C3—C2—C1120.8 (3)C9—C10—H10120.3
C3—C2—H2119.6N3—C11—C10120.4 (3)
C1—C2—H2119.6N3—C11—H11119.8
C2—C3—C4118.9 (3)C10—C11—H11119.8
C2—C3—C6119.7 (3)C9—C12—H12B109.5
C4—C3—C6121.4 (3)C9—C12—H12A109.5
C5—C4—C3119.5 (3)H12B—C12—H12A109.5
C5—C4—H4120.3C9—C12—H12C109.5
C3—C4—H4120.3H12B—C12—H12C109.5
C4—C5—N1121.4 (3)H12A—C12—H12C109.5
C4—C5—H5119.3C11—N3—C7122.8 (3)
N1—C5—H5119.3C11—N3—H3118.6
C3—C6—H6C109.5C7—N3—H3118.6
C3—C6—H6A109.5C7—N4—H4A120
H6C—C6—H6A109.5C7—N4—H4B120
C3—C6—H6B109.5H4A—N4—H4B120
H6C—C6—H6B109.5H9A—O9—H9B102 (4)
H6A—C6—H6B109.5
O3—V1—O2—V2i−9.82 (19)C3—C4—C5—N10.9 (5)
O1—V1—O2—V2i−129.97 (15)N2—C1—N1—C5−178.3 (3)
O4—V1—O2—V2i110.52 (14)C2—C1—N1—C51.7 (4)
O3—V1—O4—V229.34 (16)C4—C5—N1—C1−1.3 (5)
O1—V1—O4—V2148.80 (13)N4—C7—C8—C9−178.8 (3)
O2—V1—O4—V2−91.18 (13)N3—C7—C8—C91.7 (5)
O5—V2—O4—V1−86.26 (15)C7—C8—C9—C10−0.5 (5)
O6—V2—O4—V1154.71 (13)C7—C8—C9—C12−179.4 (3)
O2i—V2—O4—V134.48 (15)C8—C9—C10—C11−1.1 (5)
N2—C1—C2—C3178.2 (3)C12—C9—C10—C11177.8 (3)
N1—C1—C2—C3−1.8 (4)C9—C10—C11—N31.4 (5)
C1—C2—C3—C41.4 (5)C10—C11—N3—C70.0 (5)
C1—C2—C3—C6−178.9 (3)N4—C7—N3—C11179.0 (3)
C2—C3—C4—C5−1.0 (5)C8—C7—N3—C11−1.5 (4)
C6—C3—C4—C5179.3 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1iii0.861.852.700 (3)167
N2—H2A···O3iii0.862.002.861 (3)178
N2—H2B···O2iv0.862.132.959 (3)161
N3—H3···O4iv0.861.922.767 (3)167
N4—H4A···O6iv0.862.262.995 (4)143
N4—H4B···O5iii0.862.042.883 (4)165
C2—H2···O1iv0.932.603.363 (4)140
C2—H2···O2iv0.932.643.371 (4)136
C4—H4···O50.932.523.352 (4)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.861.852.700 (3)167
N2—H2A⋯O3i0.862.002.861 (3)178
N2—H2B⋯O2ii0.862.132.959 (3)161
N3—H3⋯O4ii0.861.922.767 (3)167
N4—H4A⋯O6ii0.862.262.995 (4)143
N4—H4B⋯O5i0.862.042.883 (4)165
C2—H2⋯O1ii0.932.603.363 (4)140
C2—H2⋯O2ii0.932.643.371 (4)136
C4—H4⋯O50.932.523.352 (4)149

Symmetry codes: (i) ; (ii) .

  2 in total

1.  (Et4N)4[V4O12].2H2O.

Authors:  Hiroyuki Nakano; Tomoji Ozeki; Atsushi Yagasaki
Journal:  Acta Crystallogr C       Date:  2002-08-10       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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