Literature DB >> 22090848

catena-Poly[[diaqua-bis-(3-methyl-pyridine-κN)cobalt(II)]-μ-sulfato-κO:O'].

Naveed Alam, Matthias Zeller, Nur Syamimi Ahmad Tajidi, Zainudin Arifin, Muhammad Mazhar.   

Abstract

The environment of the Co(II) ion in the title compound, [Co(SO(4))(C(6)H(7)N)(2)(H(2)O)(2)](n), exhibits an octa-hedral configuration with the two 3-methyl-pyridine ligands lying in cis positions with respect to each other and trans to the two coordinated water mol-ecules. The axial positions are occupied by O atoms of the sulfate ions. Co and S atoms occupy special positions (twofold axis, Wyckoff position 4c). Neighboring Co(II) ions are covalently connected with each other through the sulfate ions, thus creating infinite polymeric chains that run along the c axis. The water mol-ecules are connected with neighboring sulfate ions through strong O-H⋯O hydrogen bonds. Intra-molecular hydrogen bonds parallel to the propagation direction of the chains stabilize the polymeric chains, and inter-molecular hydrogen bonds between chains connect neighboring chains with each other, thus leading to polymeric double chains.

Entities:  

Year:  2011        PMID: 22090848      PMCID: PMC3212146          DOI: 10.1107/S1600536811025815

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the complexation of cobalt ions by sulfate, see: Das et al. (2009 ▶); Majumder et al. (2005 ▶); Masuhara et al. (2007 ▶); Zhong et al. (2006 ▶); Zhong et al. (2011 ▶); Dietz et al. (2009 ▶); Wu et al. (2008 ▶); Carlucci et al. (2003 ▶); Ali et al. (2005 ▶); Vreshch et al. (2003 ▶).

Experimental

Crystal data

[Co(SO4)(C6H7N)2(H2O)2] M = 377.27 Orthorhombic, a = 15.132 (2) Å b = 16.687 (2) Å c = 6.4503 (9) Å V = 1628.7 (4) Å3 Z = 4 Mo Kα radiation μ = 1.21 mm−1 T = 100 K 0.60 × 0.12 × 0.12 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.786, T max = 0.865 15656 measured reflections 2028 independent reflections 1892 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.075 S = 1.08 2028 reflections 108 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.57 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT-Plus (Bruker, 2003 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811025815/fi2108sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025815/fi2108Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(SO4)(C6H7N)2(H2O)2]Dx = 1.539 Mg m3
Mr = 377.27Melting point: 373 K
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 5623 reflections
a = 15.132 (2) Åθ = 2.4–30.5°
b = 16.687 (2) ŵ = 1.21 mm1
c = 6.4503 (9) ÅT = 100 K
V = 1628.7 (4) Å3Needle, red
Z = 40.60 × 0.12 × 0.12 mm
F(000) = 780
Bruker SMART APEX CCD diffractometer2028 independent reflections
Radiation source: fine-focus sealed tube1892 reflections with I > 2σ(I)
graphiteRint = 0.034
ω scansθmax = 28.3°, θmin = 1.8°
Absorption correction: multi-scan (SADABS in SAINT-Plus; Bruker, 2003)h = −20→19
Tmin = 0.786, Tmax = 0.865k = −22→22
15656 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0404P)2 + 0.7529P] where P = (Fo2 + 2Fc2)/3
2028 reflections(Δ/σ)max = 0.001
108 parametersΔρmax = 0.57 e Å3
2 restraintsΔρmin = −0.32 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.59471 (10)0.18494 (8)0.0429 (2)0.0210 (3)
H10.54660.1895−0.05090.025*
C20.65854 (10)0.12686 (8)0.0035 (2)0.0236 (3)
C30.72901 (10)0.12145 (9)0.1412 (3)0.0250 (3)
H30.77450.08320.11930.030*
C40.73227 (10)0.17218 (9)0.3100 (3)0.0268 (3)
H40.78000.16910.40540.032*
C50.66527 (9)0.22760 (9)0.3387 (2)0.0224 (3)
H50.66750.26170.45640.027*
C60.65160 (13)0.07315 (11)−0.1835 (3)0.0384 (4)
H6A0.63250.0196−0.13990.058*
H6B0.70940.0694−0.25130.058*
H6C0.60840.0955−0.28080.058*
Co10.50000.325574 (15)0.25000.01344 (10)
N10.59730 (8)0.23485 (7)0.20607 (18)0.0175 (2)
O10.59964 (7)0.41307 (6)0.21413 (16)0.0177 (2)
H1A0.5893 (14)0.4584 (10)0.263 (3)0.027*
H1B0.6013 (12)0.4199 (11)0.088 (2)0.027*
O20.52369 (7)0.32565 (5)0.57274 (15)0.0183 (2)
O30.42370 (6)0.42849 (6)0.69346 (15)0.0181 (2)
S10.50000.37749 (3)0.75000.01309 (12)
U11U22U33U12U13U23
C10.0248 (7)0.0188 (6)0.0192 (6)0.0005 (5)−0.0001 (5)−0.0020 (5)
C20.0287 (7)0.0185 (6)0.0234 (7)0.0004 (5)0.0057 (6)−0.0018 (5)
C30.0221 (7)0.0199 (7)0.0329 (8)0.0042 (5)0.0066 (6)0.0021 (6)
C40.0212 (7)0.0271 (8)0.0320 (8)0.0017 (6)−0.0033 (6)0.0009 (6)
C50.0222 (7)0.0236 (7)0.0215 (7)−0.0002 (5)−0.0025 (5)−0.0027 (5)
C60.0487 (10)0.0320 (9)0.0346 (9)0.0125 (8)0.0008 (8)−0.0145 (8)
Co10.01657 (15)0.01387 (15)0.00988 (14)0.0000.00000 (8)0.000
N10.0185 (6)0.0168 (5)0.0173 (5)0.0001 (4)0.0008 (4)−0.0007 (4)
O10.0224 (5)0.0159 (5)0.0148 (5)−0.0010 (4)−0.0002 (4)−0.0017 (4)
O20.0258 (5)0.0187 (5)0.0105 (5)0.0047 (4)0.0004 (4)−0.0012 (3)
O30.0200 (5)0.0184 (5)0.0159 (4)0.0032 (4)−0.0009 (4)−0.0012 (4)
S10.0168 (2)0.0135 (2)0.0090 (2)0.0000.00065 (14)0.000
C1—N11.3427 (18)C6—H6C0.9800
C1—C21.392 (2)Co1—O12.1115 (10)
C1—H10.9500Co1—O1i2.1115 (10)
C2—C31.391 (2)Co1—O2i2.1124 (10)
C2—C61.506 (2)Co1—O22.1124 (10)
C3—C41.380 (2)Co1—N12.1308 (12)
C3—H30.9500Co1—N1i2.1308 (12)
C4—C51.385 (2)O1—H1A0.835 (15)
C4—H40.9500O1—H1B0.820 (15)
C5—N11.3431 (19)O2—S11.4779 (10)
C5—H50.9500O3—S11.4799 (10)
C6—H6A0.9800S1—O2ii1.4779 (10)
C6—H6B0.9800S1—O3ii1.4799 (10)
N1—C1—C2123.71 (14)O1i—Co1—O290.73 (4)
N1—C1—H1118.1O2i—Co1—O2179.93 (5)
C2—C1—H1118.1O1—Co1—N189.05 (5)
C3—C2—C1117.41 (13)O1i—Co1—N1177.82 (4)
C3—C2—C6121.76 (14)O2i—Co1—N189.23 (4)
C1—C2—C6120.82 (14)O2—Co1—N190.82 (4)
C4—C3—C2119.45 (13)O1—Co1—N1i177.82 (4)
C4—C3—H3120.3O1i—Co1—N1i89.05 (5)
C2—C3—H3120.3O2i—Co1—N1i90.82 (4)
C3—C4—C5119.27 (15)O2—Co1—N1i89.23 (4)
C3—C4—H4120.4N1—Co1—N1i89.44 (6)
C5—C4—H4120.4C1—N1—C5117.75 (12)
N1—C5—C4122.40 (14)C1—N1—Co1121.65 (10)
N1—C5—H5118.8C5—N1—Co1120.56 (9)
C4—C5—H5118.8Co1—O1—H1A116.7 (15)
C2—C6—H6A109.5Co1—O1—H1B103.1 (13)
C2—C6—H6B109.5H1A—O1—H1B104.9 (17)
H6A—C6—H6B109.5S1—O2—Co1136.19 (6)
C2—C6—H6C109.5O2—S1—O2ii108.35 (8)
H6A—C6—H6C109.5O2—S1—O3ii109.76 (6)
H6B—C6—H6C109.5O2ii—S1—O3ii109.58 (5)
O1—Co1—O1i92.51 (6)O2—S1—O3109.58 (5)
O1—Co1—O2i90.73 (4)O2ii—S1—O3109.76 (6)
O1i—Co1—O2i89.22 (4)O3ii—S1—O3109.79 (8)
O1—Co1—O289.22 (4)
N1—C1—C2—C3−0.6 (2)N1i—Co1—N1—C165.61 (10)
N1—C1—C2—C6−179.69 (15)O1—Co1—N1—C561.84 (11)
C1—C2—C3—C40.8 (2)O2i—Co1—N1—C5152.59 (11)
C6—C2—C3—C4179.90 (15)O2—Co1—N1—C5−27.36 (11)
C2—C3—C4—C5−0.1 (2)N1i—Co1—N1—C5−116.59 (12)
C3—C4—C5—N1−1.0 (2)O1—Co1—O2—S178.59 (9)
C2—C1—N1—C5−0.4 (2)O1i—Co1—O2—S1−13.91 (9)
C2—C1—N1—Co1177.45 (11)N1—Co1—O2—S1167.62 (9)
C4—C5—N1—C11.2 (2)N1i—Co1—O2—S1−102.95 (10)
C4—C5—N1—Co1−176.65 (11)Co1—O2—S1—O2ii138.72 (11)
O1—Co1—N1—C1−115.96 (11)Co1—O2—S1—O3ii−101.66 (9)
O2i—Co1—N1—C1−25.22 (11)Co1—O2—S1—O318.98 (11)
O2—Co1—N1—C1154.83 (11)
D—H···AD—HH···AD···AD—H···A
O1—H1B···O3i0.82 (2)1.86 (2)2.6652 (15)166.(2)
O1—H1A···O3iii0.84 (2)1.92 (2)2.7331 (14)165.(2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1B⋯O3i0.82 (2)1.86 (2)2.6652 (15)166 (2)
O1—H1A⋯O3ii0.84 (2)1.92 (2)2.7331 (14)165 (2)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Inverse bilayer structure of mononuclear Co(II) and Ni(II) complexes of the type M(H2O)3(SO4)(4-CNpy)2.

Authors:  Birinchi K Das; Sanchay J Bora; Manjit K Bhattacharyya; Rama K Barman
Journal:  Acta Crystallogr B       Date:  2009-07-11
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