Literature DB >> 22090821

Dichlorido{N,N-dimethyl-N'-[1-(2-pyrid-yl)ethyl-idene]ethane-1,2-diamine-κN,N',N''}zinc.

Nura Suleiman Gwaram1, Hamid Khaledi, Hapipah Mohd Ali.   

Abstract

The asymmetric unit of the title compound, [ZnCl(2)(C(11)H(17)N(3))], contains two independent penta-coordinate Zn(II) complex mol-ecules. In each mol-ecule, the metal atom is coordinated by an N,N',N''-tridenate Schiff base and two Cl atoms in a distorted square-pyramidal geometry. The two mol-ecules differ little in their geometry, but more in their inter-molecular inter-actions. In the crystal, adjacent mol-ecules are connected via C-H⋯Cl inter-actions into a three-dimensional supra-molecular structure. The network is supplemented by π-π inter-actions formed between the aromatic rings of pairs of the symmetry-related mol-ecules [centroid-centroid distances = 3.6255 (10) and 3.7073 (10) Å]. The crystal lattice contains void spaces with a size of 52 Å(3).

Entities:  

Year:  2011        PMID: 22090821      PMCID: PMC3212119          DOI: 10.1107/S1600536811025669

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isotypic Mn(II) complex, see: Ikmal Hisham et al. (2011 ▶). For the crystal structures of similar ZnCl2 complexes, see: Gourbatsis et al. (1999 ▶); Sun (2005 ▶). For a description of the geometry of five-coordinate metal complexes, see: Addison et al. (1984 ▶).

Experimental

Crystal data

[ZnCl2(C11H17N3)] M = 327.55 Monoclinic, a = 17.4849 (8) Å b = 9.8161 (4) Å c = 20.4264 (7) Å β = 124.578 (3)° V = 2886.6 (2) Å3 Z = 8 Mo Kα radiation μ = 2.05 mm−1 T = 100 K 0.27 × 0.23 × 0.15 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.607, T max = 0.748 20477 measured reflections 6294 independent reflections 5510 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.052 S = 1.04 6294 reflections 313 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811025669/om2444sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025669/om2444Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnCl2(C11H17N3)]F(000) = 1344
Mr = 327.55Dx = 1.507 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9925 reflections
a = 17.4849 (8) Åθ = 2.4–30.6°
b = 9.8161 (4) ŵ = 2.05 mm1
c = 20.4264 (7) ÅT = 100 K
β = 124.578 (3)°Block, colorless
V = 2886.6 (2) Å30.27 × 0.23 × 0.15 mm
Z = 8
Bruker APEXII CCD diffractometer6294 independent reflections
Radiation source: fine-focus sealed tube5510 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 27.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −22→21
Tmin = 0.607, Tmax = 0.748k = −12→12
20477 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.021Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.052H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0226P)2 + 0.9433P] where P = (Fo2 + 2Fc2)/3
6294 reflections(Δ/σ)max = 0.002
313 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.097383 (12)0.523307 (18)0.248455 (10)0.01180 (5)
Cl10.22099 (3)0.66993 (4)0.31121 (2)0.01561 (8)
Cl20.14396 (3)0.31088 (4)0.23943 (2)0.01519 (8)
N10.03628 (9)0.60104 (13)0.12863 (8)0.0139 (3)
N2−0.04898 (9)0.51386 (13)0.19110 (8)0.0141 (3)
N30.08663 (9)0.49253 (13)0.34845 (8)0.0141 (3)
C10.08312 (12)0.65350 (16)0.10080 (10)0.0181 (3)
H10.14870.66200.13580.022*
C20.03935 (13)0.69606 (17)0.02250 (10)0.0225 (4)
H20.07450.73170.00410.027*
C3−0.05605 (13)0.68571 (18)−0.02813 (10)0.0238 (4)
H3−0.08760.7140−0.08200.029*
C4−0.10510 (12)0.63350 (17)0.00065 (10)0.0202 (3)
H4−0.17090.6268−0.03300.024*
C5−0.05711 (11)0.59111 (16)0.07919 (9)0.0156 (3)
C6−0.10354 (11)0.53702 (15)0.11671 (10)0.0153 (3)
C7−0.20671 (12)0.51654 (19)0.06620 (11)0.0247 (4)
H7A−0.22720.48680.09970.037*
H7B−0.22290.44690.02590.037*
H7C−0.23750.60250.04000.037*
C8−0.08002 (11)0.46662 (16)0.24024 (10)0.0161 (3)
H8A−0.12920.39680.21130.019*
H8B−0.10560.54360.25340.019*
C90.00363 (11)0.40623 (16)0.31586 (9)0.0167 (3)
H9A−0.01070.39620.35600.020*
H9B0.01660.31450.30430.020*
C100.16872 (11)0.42164 (17)0.41521 (9)0.0196 (3)
H10A0.22420.47740.43490.029*
H10B0.17620.33360.39690.029*
H10C0.16010.40690.45810.029*
C110.07513 (12)0.62345 (17)0.37716 (10)0.0186 (3)
H11A0.02390.67450.33240.028*
H11B0.13260.67650.40150.028*
H11C0.06130.60650.41670.028*
Zn20.381351 (12)0.529056 (18)0.644032 (11)0.01293 (5)
Cl30.34646 (3)0.30943 (4)0.59819 (2)0.01758 (8)
Cl40.27052 (3)0.69499 (4)0.58273 (2)0.01882 (9)
N40.45804 (9)0.59876 (13)0.59532 (8)0.0145 (3)
N50.52234 (9)0.51339 (13)0.73866 (8)0.0130 (3)
N60.37431 (9)0.51154 (13)0.74869 (8)0.0163 (3)
C120.42130 (12)0.64614 (16)0.52195 (10)0.0182 (3)
H120.35580.65650.48720.022*
C130.47570 (12)0.68075 (17)0.49470 (10)0.0205 (4)
H130.44770.71330.44200.025*
C140.57101 (12)0.66722 (16)0.54521 (10)0.0198 (4)
H140.60950.69060.52790.024*
C150.60962 (11)0.61874 (16)0.62199 (10)0.0161 (3)
H150.67500.60850.65800.019*
C160.55100 (11)0.58562 (15)0.64499 (9)0.0130 (3)
C170.58544 (11)0.53679 (15)0.72681 (9)0.0129 (3)
C180.68712 (11)0.52205 (17)0.78736 (10)0.0181 (3)
H18A0.71520.61240.80590.027*
H18B0.71530.47530.76360.027*
H18C0.69780.46880.83240.027*
C190.54256 (11)0.46863 (16)0.81533 (9)0.0157 (3)
H19A0.56780.54530.85360.019*
H19B0.58910.39430.83740.019*
C200.45215 (11)0.41849 (16)0.80131 (10)0.0172 (3)
H20A0.43770.32670.77700.021*
H20B0.45950.41100.85290.021*
C210.38747 (13)0.64417 (17)0.78738 (11)0.0234 (4)
H21A0.33490.70380.75160.035*
H21B0.44510.68610.79970.035*
H21C0.39120.63090.83670.035*
C220.28596 (12)0.4513 (2)0.72779 (11)0.0263 (4)
H22A0.28780.43760.77620.039*
H22B0.27660.36340.70150.039*
H22C0.23460.51270.69180.039*
U11U22U33U12U13U23
Zn10.01005 (10)0.01180 (9)0.01230 (9)0.00035 (7)0.00560 (8)0.00060 (7)
Cl10.01217 (18)0.01420 (18)0.01770 (19)−0.00150 (14)0.00683 (16)−0.00033 (14)
Cl20.01386 (19)0.01249 (18)0.01870 (19)0.00000 (14)0.00892 (16)−0.00121 (14)
N10.0130 (7)0.0136 (7)0.0141 (6)0.0031 (5)0.0071 (6)0.0012 (5)
N20.0132 (7)0.0117 (6)0.0175 (7)0.0005 (5)0.0088 (6)−0.0004 (5)
N30.0128 (7)0.0131 (6)0.0142 (7)0.0005 (5)0.0064 (6)0.0003 (5)
C10.0182 (9)0.0167 (8)0.0211 (8)0.0044 (7)0.0122 (7)0.0029 (6)
C20.0274 (10)0.0221 (9)0.0227 (9)0.0062 (7)0.0170 (8)0.0067 (7)
C30.0294 (10)0.0232 (9)0.0151 (8)0.0067 (7)0.0105 (8)0.0033 (7)
C40.0188 (9)0.0201 (9)0.0158 (8)0.0025 (7)0.0062 (7)−0.0008 (7)
C50.0161 (8)0.0121 (8)0.0153 (8)0.0018 (6)0.0068 (7)−0.0023 (6)
C60.0137 (8)0.0114 (7)0.0179 (8)0.0003 (6)0.0072 (7)−0.0017 (6)
C70.0150 (9)0.0282 (10)0.0222 (9)−0.0020 (7)0.0055 (8)0.0009 (7)
C80.0147 (8)0.0158 (8)0.0198 (8)−0.0029 (6)0.0109 (7)−0.0009 (6)
C90.0182 (9)0.0144 (8)0.0197 (8)−0.0015 (6)0.0120 (7)0.0009 (6)
C100.0179 (9)0.0203 (9)0.0166 (8)0.0038 (7)0.0074 (7)0.0048 (7)
C110.0186 (9)0.0178 (8)0.0189 (8)0.0017 (7)0.0103 (7)−0.0035 (7)
Zn20.01031 (10)0.01210 (9)0.01425 (9)−0.00008 (7)0.00570 (8)−0.00033 (7)
Cl30.0177 (2)0.01292 (18)0.01780 (19)−0.00023 (15)0.00746 (17)−0.00134 (14)
Cl40.0140 (2)0.01604 (19)0.02074 (19)0.00305 (15)0.00643 (17)0.00000 (15)
N40.0132 (7)0.0133 (7)0.0142 (7)−0.0006 (5)0.0062 (6)−0.0007 (5)
N50.0126 (7)0.0121 (6)0.0138 (6)0.0007 (5)0.0071 (6)0.0003 (5)
N60.0143 (7)0.0154 (7)0.0205 (7)−0.0009 (5)0.0107 (6)−0.0018 (5)
C120.0157 (8)0.0182 (8)0.0147 (8)0.0000 (7)0.0051 (7)0.0007 (6)
C130.0264 (10)0.0181 (8)0.0165 (8)−0.0003 (7)0.0118 (8)0.0021 (6)
C140.0253 (9)0.0179 (8)0.0221 (9)−0.0022 (7)0.0168 (8)0.0005 (7)
C150.0144 (8)0.0151 (8)0.0190 (8)0.0005 (6)0.0096 (7)−0.0011 (6)
C160.0127 (8)0.0102 (7)0.0138 (7)0.0012 (6)0.0062 (7)−0.0009 (6)
C170.0117 (8)0.0097 (7)0.0142 (8)−0.0005 (6)0.0055 (7)−0.0021 (6)
C180.0124 (8)0.0215 (9)0.0184 (8)0.0004 (7)0.0075 (7)0.0017 (7)
C190.0169 (8)0.0165 (8)0.0145 (8)0.0020 (6)0.0093 (7)0.0027 (6)
C200.0196 (9)0.0155 (8)0.0177 (8)0.0008 (7)0.0113 (7)0.0017 (6)
C210.0255 (10)0.0216 (9)0.0248 (9)0.0036 (7)0.0152 (8)−0.0044 (7)
C220.0199 (10)0.0327 (10)0.0310 (10)−0.0051 (8)0.0173 (9)−0.0013 (8)
Zn1—N22.1278 (13)Zn2—N52.1044 (13)
Zn1—N32.1758 (13)Zn2—N42.1842 (13)
Zn1—N12.1785 (13)Zn2—N62.2166 (13)
Zn1—Cl22.2837 (4)Zn2—Cl42.2852 (4)
Zn1—Cl12.2893 (4)Zn2—Cl32.2910 (4)
N1—C11.337 (2)N4—C121.335 (2)
N1—C51.351 (2)N4—C161.348 (2)
N2—C61.275 (2)N5—C171.2775 (19)
N2—C81.4612 (19)N5—C191.4635 (19)
N3—C111.473 (2)N6—C211.472 (2)
N3—C91.473 (2)N6—C221.473 (2)
N3—C101.477 (2)N6—C201.477 (2)
C1—C21.389 (2)C12—C131.390 (2)
C1—H10.9500C12—H120.9500
C2—C31.380 (3)C13—C141.381 (2)
C2—H20.9500C13—H130.9500
C3—C41.384 (2)C14—C151.393 (2)
C3—H30.9500C14—H140.9500
C4—C51.387 (2)C15—C161.387 (2)
C4—H40.9500C15—H150.9500
C5—C61.495 (2)C16—C171.498 (2)
C6—C71.499 (2)C17—C181.488 (2)
C7—H7A0.9800C18—H18A0.9800
C7—H7B0.9800C18—H18B0.9800
C7—H7C0.9800C18—H18C0.9800
C8—C91.521 (2)C19—C201.520 (2)
C8—H8A0.9900C19—H19A0.9900
C8—H8B0.9900C19—H19B0.9900
C9—H9A0.9900C20—H20A0.9900
C9—H9B0.9900C20—H20B0.9900
C10—H10A0.9800C21—H21A0.9800
C10—H10B0.9800C21—H21B0.9800
C10—H10C0.9800C21—H21C0.9800
C11—H11A0.9800C22—H22A0.9800
C11—H11B0.9800C22—H22B0.9800
C11—H11C0.9800C22—H22C0.9800
N2—Zn1—N378.06 (5)N5—Zn2—N474.89 (5)
N2—Zn1—N174.15 (5)N5—Zn2—N677.63 (5)
N3—Zn1—N1148.73 (5)N4—Zn2—N6148.01 (5)
N2—Zn1—Cl2106.76 (4)N5—Zn2—Cl4137.94 (4)
N3—Zn1—Cl2100.01 (4)N4—Zn2—Cl494.36 (4)
N1—Zn1—Cl2101.48 (3)N6—Zn2—Cl495.15 (4)
N2—Zn1—Cl1142.56 (4)N5—Zn2—Cl3102.01 (4)
N3—Zn1—Cl196.82 (4)N4—Zn2—Cl3101.45 (4)
N1—Zn1—Cl196.55 (4)N6—Zn2—Cl399.99 (4)
Cl2—Zn1—Cl1110.650 (15)Cl4—Zn2—Cl3120.032 (16)
C1—N1—C5118.83 (14)C12—N4—C16119.00 (13)
C1—N1—Zn1125.76 (11)C12—N4—Zn2126.29 (11)
C5—N1—Zn1115.39 (10)C16—N4—Zn2114.65 (10)
C6—N2—C8123.84 (14)C17—N5—C19123.13 (14)
C6—N2—Zn1120.07 (11)C17—N5—Zn2120.03 (11)
C8—N2—Zn1115.79 (10)C19—N5—Zn2116.78 (10)
C11—N3—C9111.07 (12)C21—N6—C22109.24 (13)
C11—N3—C10108.91 (12)C21—N6—C20110.95 (13)
C9—N3—C10109.76 (12)C22—N6—C20110.13 (13)
C11—N3—Zn1110.89 (9)C21—N6—Zn2111.83 (10)
C9—N3—Zn1104.09 (9)C22—N6—Zn2112.01 (11)
C10—N3—Zn1112.07 (10)C20—N6—Zn2102.55 (9)
N1—C1—C2122.36 (16)N4—C12—C13122.15 (16)
N1—C1—H1118.8N4—C12—H12118.9
C2—C1—H1118.8C13—C12—H12118.9
C3—C2—C1118.86 (16)C14—C13—C12119.16 (15)
C3—C2—H2120.6C14—C13—H13120.4
C1—C2—H2120.6C12—C13—H13120.4
C2—C3—C4119.06 (16)C13—C14—C15118.84 (15)
C2—C3—H3120.5C13—C14—H14120.6
C4—C3—H3120.5C15—C14—H14120.6
C3—C4—C5119.25 (16)C16—C15—C14118.83 (15)
C3—C4—H4120.4C16—C15—H15120.6
C5—C4—H4120.4C14—C15—H15120.6
N1—C5—C4121.63 (15)N4—C16—C15122.01 (14)
N1—C5—C6114.84 (13)N4—C16—C17114.84 (13)
C4—C5—C6123.48 (15)C15—C16—C17123.13 (14)
N2—C6—C5114.69 (14)N5—C17—C18125.30 (14)
N2—C6—C7126.21 (15)N5—C17—C16115.18 (14)
C5—C6—C7119.10 (14)C18—C17—C16119.51 (13)
C6—C7—H7A109.5C17—C18—H18A109.5
C6—C7—H7B109.5C17—C18—H18B109.5
H7A—C7—H7B109.5H18A—C18—H18B109.5
C6—C7—H7C109.5C17—C18—H18C109.5
H7A—C7—H7C109.5H18A—C18—H18C109.5
H7B—C7—H7C109.5H18B—C18—H18C109.5
N2—C8—C9107.67 (12)N5—C19—C20107.57 (13)
N2—C8—H8A110.2N5—C19—H19A110.2
C9—C8—H8A110.2C20—C19—H19A110.2
N2—C8—H8B110.2N5—C19—H19B110.2
C9—C8—H8B110.2C20—C19—H19B110.2
H8A—C8—H8B108.5H19A—C19—H19B108.5
N3—C9—C8111.57 (13)N6—C20—C19111.55 (13)
N3—C9—H9A109.3N6—C20—H20A109.3
C8—C9—H9A109.3C19—C20—H20A109.3
N3—C9—H9B109.3N6—C20—H20B109.3
C8—C9—H9B109.3C19—C20—H20B109.3
H9A—C9—H9B108.0H20A—C20—H20B108.0
N3—C10—H10A109.5N6—C21—H21A109.5
N3—C10—H10B109.5N6—C21—H21B109.5
H10A—C10—H10B109.5H21A—C21—H21B109.5
N3—C10—H10C109.5N6—C21—H21C109.5
H10A—C10—H10C109.5H21A—C21—H21C109.5
H10B—C10—H10C109.5H21B—C21—H21C109.5
N3—C11—H11A109.5N6—C22—H22A109.5
N3—C11—H11B109.5N6—C22—H22B109.5
H11A—C11—H11B109.5H22A—C22—H22B109.5
N3—C11—H11C109.5N6—C22—H22C109.5
H11A—C11—H11C109.5H22A—C22—H22C109.5
H11B—C11—H11C109.5H22B—C22—H22C109.5
D—H···AD—HH···AD···AD—H···A
C3—H3···Cl2i0.952.793.6690 (17)155
C8—H8A···Cl1ii0.992.633.5668 (16)158
C8—H8B···Cl2iii0.992.733.6564 (16)156
C11—H11A···Cl2iii0.982.773.6573 (17)151
C15—H15···Cl2iv0.952.743.6347 (17)157
C18—H18B···Cl1iv0.982.753.7227 (17)175
C19—H19B···Cl4v0.992.823.8089 (16)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯Cl2i0.952.793.6690 (17)155
C8—H8A⋯Cl1ii0.992.633.5668 (16)158
C8—H8B⋯Cl2iii0.992.733.6564 (16)156
C11—H11A⋯Cl2iii0.982.773.6573 (17)151
C15—H15⋯Cl2iv0.952.743.6347 (17)157
C18—H18B⋯Cl1iv0.982.753.7227 (17)175
C19—H19B⋯Cl4v0.992.823.8089 (16)174

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dichlorido{N,N-dimethyl-N'-[1-(2-pyrid-yl)ethyl-idene]ethane-1,2-diamine-κN,N',N''}manganese(II).

Authors:  Nurul Azimah Ikmal Hisham; Nura Suleiman Gwaram; Hamid Khaledi; Hapipah Mohd Ali
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22
  2 in total

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