Literature DB >> 22083952

The forkhead transcription factor FOXK2 promotes AP-1-mediated transcriptional regulation.

Zongling Ji1, Ian J Donaldson, Jingru Liu, Andrew Hayes, Leo A H Zeef, Andrew D Sharrocks.   

Abstract

The transcriptional control circuitry in eukaryotic cells is complex and is orchestrated by combinatorially acting transcription factors. Forkhead transcription factors often function in concert with heterotypic transcription factors to specify distinct transcriptional programs. Here, we demonstrate that FOXK2 participates in combinatorial transcriptional control with the AP-1 transcription factor. FOXK2 binding regions are widespread throughout the genome and are often coassociated with AP-1 binding motifs. FOXK2 acts to promote AP-1-dependent gene expression changes in response to activation of the AP-1 pathway. In this context, FOXK2 is required for the efficient recruitment of AP-1 to chromatin. Thus, we have uncovered an important new molecular mechanism that controls AP-1-dependent gene expression.

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Year:  2011        PMID: 22083952      PMCID: PMC3255788          DOI: 10.1128/MCB.05504-11

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  46 in total

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Authors:  Peter Carlsson; Margit Mahlapuu
Journal:  Dev Biol       Date:  2002-10-01       Impact factor: 3.582

2.  FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription.

Authors:  Mathieu Lupien; Jérôme Eeckhoute; Clifford A Meyer; Qianben Wang; Yong Zhang; Wei Li; Jason S Carroll; X Shirley Liu; Myles Brown
Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

3.  FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin.

Authors:  Paul G Giresi; Jonghwan Kim; Ryan M McDaniell; Vishwanath R Iyer; Jason D Lieb
Journal:  Genome Res       Date:  2006-12-19       Impact factor: 9.043

4.  FOXK2 transcription factor is a novel G/T-mismatch DNA binding protein.

Authors:  Yoshito Fujii; Michio Nakamura
Journal:  J Biochem       Date:  2010-01-22       Impact factor: 3.387

5.  CEAS: cis-regulatory element annotation system.

Authors:  Hyunjin Shin; Tao Liu; Arjun K Manrai; X Shirley Liu
Journal:  Bioinformatics       Date:  2009-08-18       Impact factor: 6.937

6.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

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Journal:  Nature       Date:  2007-06-14       Impact factor: 49.962

Review 7.  The evolution of Fox genes and their role in development and disease.

Authors:  Sridhar Hannenhalli; Klaus H Kaestner
Journal:  Nat Rev Genet       Date:  2009-04       Impact factor: 53.242

8.  Identification of {beta}-catenin binding regions in colon cancer cells using ChIP-Seq.

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Journal:  Nucleic Acids Res       Date:  2010-05-11       Impact factor: 16.971

9.  Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences.

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Journal:  Genome Biol       Date:  2010-08-25       Impact factor: 13.583

10.  Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing.

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Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

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2.  Identifying candidate oocyte reprogramming factors using cross-species global transcriptional analysis.

Authors:  Jason P Awe; James A Byrne
Journal:  Cell Reprogram       Date:  2013-03-04       Impact factor: 1.987

3.  c-Jun/AP-1 overexpression reprograms ERα signaling related to tamoxifen response in ERα-positive breast cancer.

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4.  Improving analysis of transcription factor binding sites within ChIP-Seq data based on topological motif enrichment.

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Journal:  BMC Genomics       Date:  2014-06-13       Impact factor: 3.969

5.  Forkhead-box series expression network is associated with outcome of clear-cell renal cell carcinoma.

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6.  BRCA1-associated protein 1 (BAP1) deubiquitinase antagonizes the ubiquitin-mediated activation of FoxK2 target genes.

Authors:  Yuki Okino; Yuka Machida; Sarah Frankland-Searby; Yuichi J Machida
Journal:  J Biol Chem       Date:  2014-12-01       Impact factor: 5.157

7.  FOXKs promote Wnt/β-catenin signaling by translocating DVL into the nucleus.

Authors:  Wenqi Wang; Xu Li; Moonsup Lee; Sohee Jun; Kathryn E Aziz; Lin Feng; My Kim Tran; Nan Li; Pierre D McCrea; Jae-Il Park; Junjie Chen
Journal:  Dev Cell       Date:  2015-03-23       Impact factor: 12.270

8.  BEND4 as a Candidate Gene for an Infection-Induced Acute Encephalopathy Characterized by a Cyst and Calcification of the Pons and Cerebellar Atrophy.

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9.  Interplay between TAp73 Protein and Selected Activator Protein-1 (AP-1) Family Members Promotes AP-1 Target Gene Activation and Cellular Growth.

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10.  Analysis of the peroxisome proliferator-activated receptor-β/δ (PPARβ/δ) cistrome reveals novel co-regulatory role of ATF4.

Authors:  Combiz Khozoie; Michael G Borland; Bokai Zhu; Songjoon Baek; Sam John; Gordon L Hager; Yatrik M Shah; Frank J Gonzalez; Jeffrey M Peters
Journal:  BMC Genomics       Date:  2012-11-24       Impact factor: 3.969

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