Literature DB >> 22081338

Reduction of preanalytical variability in specimen procurement for molecular profiling.

Virginia Espina1, Claudius Mueller.   

Abstract

Despite the tremendous perceived value, and the predicted high abundance, of disease-associated tissue biomarkers, the number of biomarkers that have been validated for routine clinical use is very low. The major roadblock has been the sample-to-sample variability and perishability of biomolecules in tissue. A chief source of variability is biomolecule perturbation caused by sample handling, the time delays following procurement, and the method of preservation. Living tissue that has been separated from its blood supply during surgical procurement goes through defined stages of reactive changes preceding death, beginning with oxidative, hypoxic, and metabolic stress. These reactive fluctuations in the tissue biomolecules can occur within 20 min postexcision, and can significantly distort the levels of critical diagnostic and prognostic biomolecules. Depending on the delay time ex vivo, and manner of handling, protein biomarkers such as signal pathway phosphoproteins will be elevated or suppressed in a manner that does not represent the biomarker levels at the time of excision. Based on analysis of phosphoproteins, one of the most labile tissue protein biomarkers, we set forth tissue procurement guidelines for clinical research. We further propose the future use of a multipurpose fixative solution designed to stabilize, preserve and maintain proteins, nucleic acids, and tissue architecture.

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Year:  2012        PMID: 22081338     DOI: 10.1007/978-1-60327-216-2_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

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Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2012-07-18       Impact factor: 4.254

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Journal:  J Proteome Res       Date:  2012-10-30       Impact factor: 4.466

Review 3.  Novel neoadjuvant therapy paradigms for bladder cancer: results from the National Cancer Center Institute Forum.

Authors:  Colin P N Dinney; Donna Hansel; David McConkey; William Shipley; Michael Hagan; Robert Dreicer; Seth Lerner; Bogdan Czerniak; Fred Waldman; Susan Groshen; Lawrence D True; Emanuel Petricoin; Dan Theodorescu; Andrew Hruszkewycz; Dean Bajorin
Journal:  Urol Oncol       Date:  2014-10-24       Impact factor: 3.498

4.  Protein drug target activation homogeneity in the face of intra-tumor heterogeneity: implications for precision medicine.

Authors:  Erika Maria Parasido; Alessandra Silvestri; Vincenzo Canzonieri; Claudio Belluco; Maria Grazia Diodoro; Massimo Milione; Flavia Melotti; Ruggero De Maria; Lance Liotta; Emanuel F Petricoin; Mariaelena Pierobon
Journal:  Oncotarget       Date:  2017-07-25
  4 in total

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