Literature DB >> 22075918

Human sapovirus classification based on complete capsid nucleotide sequences.

Tomoichiro Oka1, Kohji Mori, Nobuhiro Iritani, Seiya Harada, You Ueki, Setsuko Iizuka, Keiji Mise, Kosuke Murakami, Takaji Wakita, Kazuhiko Katayama.   

Abstract

The genetically diverse sapoviruses (SaVs) are a significant cause of acute human gastroenteritis. Human SaV surveillance is becoming more critical, and a better understanding of the diversity and distribution of the viral genotypes is needed. In this study, we analyzed 106 complete human SaV capsid nucleotide sequences to provide a better understanding of their diversity. Based on those results, we propose a novel standardized classification scheme that meets the requirements of the International Calicivirus Scientific Committee. We believe the classification scheme and strains described here will be of value for the molecular characterization and classification of newly detected SaV genotypes and for comparing data worldwide.

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Year:  2011        PMID: 22075918     DOI: 10.1007/s00705-011-1161-2

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  30 in total

Review 1.  Comprehensive review of human sapoviruses.

Authors:  Tomoichiro Oka; Qiuhong Wang; Kazuhiko Katayama; Linda J Saif
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

2.  Human Sapovirus in Mussels from Ría do Burgo, A Coruña (Spain).

Authors:  Miguel F Varela; Annalise S Hooper; Enrique Rivadulla; Jesús L Romalde
Journal:  Food Environ Virol       Date:  2016-05-07       Impact factor: 2.778

3.  Development of a Practical Method to Detect Noroviruses Contamination in Composite Meals.

Authors:  Hiroyuki Saito; Miho Toho; Tomoyuki Tanaka; Mamoru Noda
Journal:  Food Environ Virol       Date:  2015-03-22       Impact factor: 2.778

4.  Prevalence and molecular characterization of porcine enteric caliciviruses and first detection of porcine kobuviruses in US swine.

Authors:  Zufan Sisay; Qiuhong Wang; Tomoichiro Oka; Linda Saif
Journal:  Arch Virol       Date:  2013-03-02       Impact factor: 2.574

5.  Detection of multiple human sapoviruses from imported frozen individual clams.

Authors:  Setsuko Iizuka; Reiko Takai-Todaka; Hitoshi Ohshiro; Masaaki Kitajima; Qiuhong Wang; Linda J Saif; Takaji Wakita; Mamoru Noda; Kazuhiko Katayama; Tomoichiro Oka
Journal:  Food Environ Virol       Date:  2013-03-23       Impact factor: 2.778

6.  Prevalence of porcine noroviruses, molecular characterization of emerging porcine sapoviruses from finisher swine in the United States, and unified classification scheme for sapoviruses.

Authors:  Kelly A Scheuer; Tomoichiro Oka; Armando E Hoet; Wondwossen A Gebreyes; Bayleyegn Z Molla; Linda J Saif; Qiuhong Wang
Journal:  J Clin Microbiol       Date:  2013-05-15       Impact factor: 5.948

7.  Epidemiological profile and genetic diversity of sapoviruses (SaVs) identified in children suffering from acute gastroenteritis in Pune, Maharashtra, Western India, 2007-2011.

Authors:  N Lasure; V Gopalkrishna
Journal:  Epidemiol Infect       Date:  2016-09-09       Impact factor: 4.434

8.  Complete Genome Sequence of a Novel GV.2 Sapovirus Strain, NGY-1, Detected from a Suspected Foodborne Gastroenteritis Outbreak.

Authors:  Shinichiro Shibata; Tsuyoshi Sekizuka; Akari Kodaira; Makoto Kuroda; Kei Haga; Yen Hai Doan; Reiko Takai-Todaka; Kazuhiko Katayama; Takaji Wakita; Tomoichiro Oka; Hiroyuki Hirata
Journal:  Genome Announc       Date:  2015-02-12

9.  Etiological Role and Repeated Infections of Sapovirus among Children Aged Less than 2 Years in a Cohort Study in a Peri-urban Community of Peru.

Authors:  Xiaofang Liu; Helena Jahuira; Robert H Gilman; Alicia Alva; Lilia Cabrera; Michiko Okamoto; Hang Xu; Henry J Windle; Dermot Kelleher; Marco Varela; Manuela Verastegui; Maritza Calderon; Gerardo Sanchez; Vanessa Sarabia; Sarah B Ballard; Caryn Bern; Holger Mayta; Jean E Crabtree; Vitaliano Cama; Mayuko Saito; Hitoshi Oshitani
Journal:  J Clin Microbiol       Date:  2016-04-13       Impact factor: 5.948

10.  Molecular Epidemiology of Human Sapovirus among Children with Acute Gastroenteritis in Western Canada.

Authors:  Ran Zhuo; Xiaofeng Ding; Stephen B Freedman; Bonita E Lee; Samina Ali; Jasper Luong; Jianling Xie; Linda Chui; Ying Wu; Xiaoli Pang
Journal:  J Clin Microbiol       Date:  2021-07-21       Impact factor: 5.948

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