Literature DB >> 22075

Unfolding and refolding occur much faster for a proline-free proteins than for most proline-containing proteins.

J F Brandts, M Brennan.   

Abstract

The kinetics for unfolding and refolding of a parvalbumin (band 5) have been examined as a function of pH near the transition region, using stopped-flow techniques. This protein is rather unusual in that it has no proline residues, and therefore serves as a good example to test the hypothesis that the rate-limiting step seen in denaturation reactions is due to the cis-trans isomerization of proline peptide bonds in the denatured state. The kinetics for parvalbumin unfolding and refolding are complex, with the data being resolvable into two fast phases at 25 degrees. The slower of the two phases seen for the parvalbumin is about 100 to 500 times faster than the slow phase seen for proline-containing proteins under the same conditions! These results argue strongly in support of the proline isomerization hypothesis. It is also suggested that the slower phase seen for parvalbumin and the second-slowest phase seen for proline-containing proteins might be due to the cis-trans isomerization of peptide bonds of non-proline residues.

Entities:  

Mesh:

Substances:

Year:  1977        PMID: 22075      PMCID: PMC431901          DOI: 10.1073/pnas.74.10.4178

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  11 in total

Review 1.  Intermediates in protein folding reactions and the mechanism of protein folding.

Authors:  R L Baldwin
Journal:  Annu Rev Biochem       Date:  1975       Impact factor: 23.643

2.  A quantitative treatment of the kinetics of the folding transition of ribonuclease A.

Authors:  P J Hagerman; R L Baldwin
Journal:  Biochemistry       Date:  1976-04-06       Impact factor: 3.162

3.  Consideration of the Possibility that the slow step in protein denaturation reactions is due to cis-trans isomerism of proline residues.

Authors:  J F Brandts; H R Halvorson; M Brennan
Journal:  Biochemistry       Date:  1975-11-04       Impact factor: 3.162

4.  The heat-unfolded state of ribonuclease A is an equilibrium mixture of fast and slow refolding species.

Authors:  J R Garel; R L Baldwin
Journal:  J Mol Biol       Date:  1975-06-05       Impact factor: 5.469

5.  Detection of three kinetic phases in the thermal unfolding of ferricytochrome c.

Authors:  T Y Tsong
Journal:  Biochemistry       Date:  1973-06-05       Impact factor: 3.162

6.  Conformations of carp muscle calcium binding parvalbumin.

Authors:  H Donato; R B Martin
Journal:  Biochemistry       Date:  1974-10-22       Impact factor: 3.162

7.  Properties of the refolding and unfolding reactions of ribonuclease A.

Authors:  T Y Tsong; R L Baldwin; E L Elson
Journal:  Proc Natl Acad Sci U S A       Date:  1972-07       Impact factor: 11.205

8.  Kinetics of thermal unfolding of lysozyme.

Authors:  S Segawa; Y Husimi; A Wada
Journal:  Biopolymers       Date:  1973-11       Impact factor: 2.505

9.  Folding of staphylococcal nuclease: kinetic studies of two processes in acid renaturation.

Authors:  H F Epstein; A N Schechter; R F Chen; C B Anfinsen
Journal:  J Mol Biol       Date:  1971-09-28       Impact factor: 5.469

10.  CARP MYOGENS OF WHITE AND RED MUSCLES. PROPERTIES AND AMINO ACID COMPOSITION OF THE MAIN LOW-MOLECULAR-WEIGHT COMPONENTS OF WHITE MUSCLE.

Authors:  S KONOSU; G HAMOIR; J F PECHERE
Journal:  Biochem J       Date:  1965-07       Impact factor: 3.857

View more
  13 in total

1.  Effects of pH on the kinetic reaction mechanism of myoglobin unfolding studied by time-resolved electrospray ionization mass spectrometry.

Authors:  O O Sogbein; D A Simmons; L Konermann
Journal:  J Am Soc Mass Spectrom       Date:  2000-04       Impact factor: 3.109

Review 2.  Protein folding.

Authors:  T E Creighton
Journal:  Biochem J       Date:  1990-08-15       Impact factor: 3.857

Review 3.  Protein folding in the endoplasmic reticulum.

Authors:  Ineke Braakman; Daniel N Hebert
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-05-01       Impact factor: 10.005

Review 4.  Toward a better understanding of protein folding pathways.

Authors:  T E Creighton
Journal:  Proc Natl Acad Sci U S A       Date:  1988-07       Impact factor: 11.205

5.  Role of proline isomerization in folding of ribonuclease A at low temperatures.

Authors:  K H Cook; F X Schmid; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

Review 6.  Folding and association of proteins.

Authors:  R Jaenicke
Journal:  Biophys Struct Mech       Date:  1982

7.  Acid catalysis of the formation of the slow-folding species of RNase A: evidence that the reaction is proline isomerization.

Authors:  F X Schmid; R L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

8.  Evidence for involvement of proline cis-trans isomerization in the slow unfolding reaction of RNase A.

Authors:  J R Garel
Journal:  Proc Natl Acad Sci U S A       Date:  1980-02       Impact factor: 11.205

9.  Catalytically competent human and bovine zeta-thrombin and chimeras generated from unfolded polypeptide chains.

Authors:  S D Lewis; D V Brezniak; J W Fenton; J A Shafer
Journal:  Protein Sci       Date:  1992-08       Impact factor: 6.725

10.  Mechanistic insight into the role of transition-state stabilization in cyclophilin A.

Authors:  Donald Hamelberg; J Andrew McCammon
Journal:  J Am Chem Soc       Date:  2009-01-14       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.