Literature DB >> 22074935

Introducing the parvome: bioactive compounds in the microbial world.

Julian Davies1, Katherine S Ryan.   

Abstract

We describe and discuss the features and functions of the "parvome", the "-ome" of the chemical world, consisting of the small molecules produced by living organisms. Here, we focus specifically on the world of microbial small molecules. Many years of natural product discovery research, coupled with recent advances and applications of genetic and genomic techniques have revealed the presence of an enormous collection of unique small molecules that are the products of cellular metabolism. As yet, we have a poor understanding of their functions and, in most cases, little knowledge of their routes of biosynthesis, although such information is accruing rapidly. In this review, we attempt to address the raison d'etre of the parvome in the bacterial world, and we propose that a better understanding of the true biological roles of natural products will permit the application of rational approaches to the more effective exploitation of their use in medicine by humankind.

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Year:  2011        PMID: 22074935     DOI: 10.1021/cb200337h

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  50 in total

Review 1.  Messenger functions of the bacterial cell wall-derived muropeptides.

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Journal:  Biochemistry       Date:  2012-03-27       Impact factor: 3.162

Review 2.  Working together for the common good: cell-cell communication in bacteria.

Authors:  Ann M Stevens; Martin Schuster; Kendra P Rumbaugh
Journal:  J Bacteriol       Date:  2012-03-02       Impact factor: 3.490

Review 3.  Antibiotics and evolution: food for thought.

Authors:  C R Strachan; J Davies
Journal:  J Ind Microbiol Biotechnol       Date:  2015-11-02       Impact factor: 3.346

4.  Molecular networking as a dereplication strategy.

Authors:  Jane Y Yang; Laura M Sanchez; Christopher M Rath; Xueting Liu; Paul D Boudreau; Nicole Bruns; Evgenia Glukhov; Anne Wodtke; Rafael de Felicio; Amanda Fenner; Weng Ruh Wong; Roger G Linington; Lixin Zhang; Hosana M Debonsi; William H Gerwick; Pieter C Dorrestein
Journal:  J Nat Prod       Date:  2013-09-11       Impact factor: 4.050

5.  Recasting natural product research.

Authors:  Cormac Sheridan
Journal:  Nat Biotechnol       Date:  2012-05-07       Impact factor: 54.908

6.  Mass spectral molecular networking of living microbial colonies.

Authors:  Jeramie Watrous; Patrick Roach; Theodore Alexandrov; Brandi S Heath; Jane Y Yang; Roland D Kersten; Menno van der Voort; Kit Pogliano; Harald Gross; Jos M Raaijmakers; Bradley S Moore; Julia Laskin; Nuno Bandeira; Pieter C Dorrestein
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

Review 7.  Activating secondary metabolism with stress and chemicals.

Authors:  Vanessa Yoon; Justin R Nodwell
Journal:  J Ind Microbiol Biotechnol       Date:  2013-12-11       Impact factor: 3.346

Review 8.  Do antibiotics have environmental side-effects? Impact of synthetic antibiotics on biogeochemical processes.

Authors:  Céline Roose-Amsaleg; Anniet M Laverman
Journal:  Environ Sci Pollut Res Int       Date:  2015-07-08       Impact factor: 4.223

9.  Pseudomonas aeruginosa-Derived Rhamnolipids and Other Detergents Modulate Colony Morphotype and Motility in the Burkholderia cepacia Complex.

Authors:  Steve P Bernier; Courtney Hum; Xiang Li; George A O'Toole; Nathan A Magarvey; Michael G Surette
Journal:  J Bacteriol       Date:  2017-06-13       Impact factor: 3.490

10.  Analytical chemistry: Virulence caught green-handed.

Authors:  Laura M Sanchez; Pieter C Dorrestein
Journal:  Nat Chem       Date:  2013-03       Impact factor: 24.427

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