Literature DB >> 22072652

Draft genome sequence of Bacteroides faecis MAJ27T, a strain isolated from human feces.

Min-Soo Kim1, Tae Woong Whon, Seong Woon Roh, Na-Ri Shin, Jin-Woo Bae.   

Abstract

Despite the ecological importance of the dominant gut bacteria Bacteroides, few genomes have been defined. The Gram-negative, strictly anaerobic intestinal bacterium Bacteroides faecis MAJ27(T) was isolated from the feces of a healthy adult. Here, the draft genome sequence of the type strain B. faecis MAJ27 (6.11 Mbp) is reported.

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Year:  2011        PMID： 22072652      PMCID： PMC3232885          DOI： 10.1128/JB.06210-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  19 in total

1.  A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.

Authors:  Jian Xu; Magnus K Bjursell; Jason Himrod; Su Deng; Lynn K Carmichael; Herbert C Chiang; Lora V Hooper; Jeffrey I Gordon
Journal:  Science       Date:  2003-03-28       Impact factor: 47.728

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

Review 3.  Ecological and evolutionary forces shaping microbial diversity in the human intestine.

Authors:  Ruth E Ley; Daniel A Peterson; Jeffrey I Gordon
Journal:  Cell       Date:  2006-02-24       Impact factor: 41.582

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Glycan foraging in vivo by an intestine-adapted bacterial symbiont.

Authors:  Justin L Sonnenburg; Jian Xu; Douglas D Leip; Chien-Huan Chen; Benjamin P Westover; Jeremy Weatherford; Jeremy D Buhler; Jeffrey I Gordon
Journal:  Science       Date:  2005-03-25       Impact factor: 47.728

6.  Draft genome sequence of Bacteroides vulgatus PC510, a strain isolated from human feces.

Authors:  Páraic Ó Cuív; Eline S Klaassens; A Scott Durkin; Derek M Harkins; Les Foster; Jamison McCorrison; Manolito Torralba; Karen E Nelson; Mark Morrison
Journal:  J Bacteriol       Date:  2011-05-27       Impact factor: 3.490

7.  Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes.

Authors:  Lionel Rigottier-Gois; Violaine Rochet; Nathalie Garrec; Antonia Suau; Joël Doré
Journal:  Syst Appl Microbiol       Date:  2003-03       Impact factor: 4.022

Review 8.  How host-microbial interactions shape the nutrient environment of the mammalian intestine.

Authors:  Lora V Hooper; Tore Midtvedt; Jeffrey I Gordon
Journal:  Annu Rev Nutr       Date:  2002-04-04       Impact factor: 11.848

9.  Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria.

Authors:  Takahiro Matsuki; Koichi Watanabe; Junji Fujimoto; Yukiko Kado; Toshihiko Takada; Kazumasa Matsumoto; Ryuichiro Tanaka
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

10.  The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.

Authors:  Ross Overbeek; Tadhg Begley; Ralph M Butler; Jomuna V Choudhuri; Han-Yu Chuang; Matthew Cohoon; Valérie de Crécy-Lagard; Naryttza Diaz; Terry Disz; Robert Edwards; Michael Fonstein; Ed D Frank; Svetlana Gerdes; Elizabeth M Glass; Alexander Goesmann; Andrew Hanson; Dirk Iwata-Reuyl; Roy Jensen; Neema Jamshidi; Lutz Krause; Michael Kubal; Niels Larsen; Burkhard Linke; Alice C McHardy; Folker Meyer; Heiko Neuweger; Gary Olsen; Robert Olson; Andrei Osterman; Vasiliy Portnoy; Gordon D Pusch; Dmitry A Rodionov; Christian Rückert; Jason Steiner; Rick Stevens; Ines Thiele; Olga Vassieva; Yuzhen Ye; Olga Zagnitko; Veronika Vonstein
Journal:  Nucleic Acids Res       Date:  2005-10-07       Impact factor: 16.971
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