Literature DB >> 2207171

In vivo and in vitro analysis of structure-function relationships in ribosomal protein L25 from Saccharomyces cerevisiae.

C A Rutgers1, P J Schaap, J van 't Riet, C L Woldringh, H A Raué.   

Abstract

We have developed a combination of in vivo and in vitro methods which allows us to determine the effect of practically every structural change, deletions as well as point mutations, on various biological functions of a ribosomal protein (r-protein). We have used this approach to delineate the functional domains of r-protein L25 from Saccharomyces cerevisiae. By analysis of the intracellular distribution of fusion proteins carrying various portions of L25 linked to Escherichia coli beta-galactosidase we traced the nuclear localization signal(s) of L25 to the region encompassing the N-terminal 61 amino acids of the protein. On the other hand, using in vitro prepared fragments of L25 we located the domain responsible for its specific binding to 26S rRNA to the region between amino acids 61 and 135. In order to be able to analyze the effect of mutations in L25 on ribosome biogenesis and function in vivo we constructed a mutant yeast strain in which the chromosomal L25 gene is placed under control of the inducible yeast GAL promoter. Since this strain is unable to grow on glucose as a carbon source the L25 gene must be essential for cell viability. Growth on glucose can be restored by introduction of a wild-type L25 gene on a plasmid, demonstrating that under these conditions the cells are dependent upon an extrachromosomally supplied copy of the gene.

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Year:  1990        PMID: 2207171     DOI: 10.1016/0167-4781(90)90144-q

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  10 in total

1.  Establishment of Arabidopsis thaliana ribosomal protein RPL23A-1 as a functional homologue of Saccharomyces cerevisiae ribosomal protein L25.

Authors:  K B McIntosh; P C Bonham-Smith
Journal:  Plant Mol Biol       Date:  2001-08       Impact factor: 4.076

2.  All three functional domains of the large ribosomal subunit protein L25 are required for both early and late pre-rRNA processing steps in Saccharomyces cerevisiae.

Authors:  C A van Beekvelt; M de Graaff-Vincent; A W Faber; J van't Riet; J Venema; H A Raué
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

3.  Charge versus sequence for nuclear/nucleolar localization of plant ribosomal proteins.

Authors:  Raghavendra P Savada; Peta C Bonham-Smith
Journal:  Plant Mol Biol       Date:  2013-01-29       Impact factor: 4.076

4.  The phylogenetically conserved doublet tertiary interaction in domain III of the large subunit rRNA is crucial for ribosomal protein binding.

Authors:  E A Kooi; C A Rutgers; A Mulder; J Van't Riet; J Venema; H A Raué
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-01       Impact factor: 11.205

5.  Arabidopsis ribosomal proteins RPL23aA and RPL23aB are differentially targeted to the nucleolus and are disparately required for normal development.

Authors:  Rory F Degenhardt; Peta C Bonham-Smith
Journal:  Plant Physiol       Date:  2008-03-05       Impact factor: 8.340

6.  The conserved GTPase center and variable region V9 from Saccharomyces cerevisiae 26S rRNA can be replaced by their equivalents from other prokaryotes or eukaryotes without detectable loss of ribosomal function.

Authors:  W Musters; P M Conçalves; K Boon; H A Raué; H van Heerikhuizen; R J Planta
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

7.  Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.

Authors:  Gisela Pöll; Michael Pilsl; Joachim Griesenbeck; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2021-11-23       Impact factor: 3.240

8.  rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

Authors:  Gisela Pöll; Tobias Braun; Jelena Jakovljevic; Andreas Neueder; Steffen Jakob; John L Woolford; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2009-12-11       Impact factor: 3.240

9.  A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.

Authors:  E Hurt; S Hannus; B Schmelzl; D Lau; D Tollervey; G Simos
Journal:  J Cell Biol       Date:  1999-02-08       Impact factor: 10.539

10.  Functional conservation between structurally diverse ribosomal proteins from Drosophila melanogaster and Saccharomyces cerevisiae: fly L23a can substitute for yeast L25 in ribosome assembly and function.

Authors:  Carrie L N Ross; Ranoo R Patel; Tamra C Mendelson; Vassie C Ware
Journal:  Nucleic Acids Res       Date:  2007-06-21       Impact factor: 16.971

  10 in total

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