| Literature DB >> 22068881 |
Naoki Nomura1, Yoshihiro Sakoda, Mayumi Endo, Hiromi Yoshida, Naoki Yamamoto, Masatoshi Okamatsu, Kenji Sakurai, Nam Van Hoang, Long Van Nguyen, Huy Duc Chu, Tien Ngoc Tien, Hiroshi Kida.
Abstract
In the surveillance of avian influenza in Vietnam, 26 H9N2, 1 H3N2, 1 H3N8, 7 H4N6, 3 H11N3, and 1 H11N9 viruses were isolated from tracheal and cloacal swab samples of 300 domestic ducks in April 2009, and 1 H9N6 virus from 300 bird samples in March 2010. Out of the 27 H9 virus isolates, the hemagglutinins of 18 strains were genetically classified as belonging to the sublineage G1, and the other nine belonged to the Korean sublineage. Phylogenetic analysis revealed that one of the 27 H9 viruses was a reassortant in which the PB2 gene belonged to the Korean sublineage and the other seven genes belonged to the G1 sublineage. Three representative H9N2 viruses were intranasally inoculated into ducks, chickens, pigs, and mice. On the basis of experimental infection studies, it was found that each of the three viruses readily infected pigs and replicated in their upper respiratory tracts, and they infected chickens with slight replication. Viruses were recovered from the lungs of mice inoculated with two of the three isolates. The present results reveal that H9 avian influenza viruses are prevailing and genetic reassortment occurs among domestic ducks in Vietnam. It is recommended that careful surveillance of swine influenza with H9 viruses should be performed to prepare for pandemic influenza.Entities:
Mesh:
Year: 2011 PMID: 22068881 PMCID: PMC7086777 DOI: 10.1007/s00705-011-1152-3
Source DB: PubMed Journal: Arch Virol ISSN: 0304-8608 Impact factor: 2.574
Viruses isolated from domestic ducks in southern Vietnam in 2009 and 2010
| Place of sampling | Subtypes of isolates | ID number of samples |
|---|---|---|
| Household | ||
| A | H4N6 | OIE-2454, OIE-2455 |
| H9N2 | OIE-2448 | |
| B | H4N6 | OIE-2470, OIE-2471 |
| C | H4N6 | OIE-2480, OIE-2481 |
| D | H4N6 | OIE-2577 |
| H9N2 | OIE-2574, OIE-2575, OIE-2576 | |
| E | H9N2 | OIE-2580, OIE-2581, OIE-2582, OIE-2583, OIE-2584, OIE-2585, OIE-2586, OIE-2587, OIE-2590, OIE-2591, OIE-2592, OIE-2593, OIE-2594, OIE-2595 |
| Live-bird market | ||
| F | H3N8 | OIE-2403 |
| G | H9N2 | OIE-2322, OIE-2323, OIE-2325, OIE-2326, OIE-2327, OIE-2328 |
| H11N3 | OIE-2329, OIE-2336 | |
| H | H3N2 | OIE-2382 |
| H9N2 | OIE-2390 | |
| H11N3 | OIE-2391 | |
| H11N9 | OIE-2386 | |
| I | H9N6 | OIE-2334a |
| Slaughter house | ||
| J | H9N2 | OIE-2313 |
aThis virus was isolated in 2010
Fig. 1Sampling points in southern Vietnam in the present study. Location of Bac Lieu province in Vietnam (a). Magnification of the circle in Fig. 1a and sampling points in Vinh Loi district, Bac Lieu town, and Hoa Binh district in Bac Lieu province (b). Avian influenza viruses were isolated from domestic ducks in households A-E, live-bird markets F-I, and slaughterhouse J in Vinh Loi district, Bac Lieu town, and Hoa Binh district in Vietnam
Fig. 2Phylogenetic trees for the eight gene segments of H9 influenza viruses. Nucleotides 70-417 (347 bp) of HA, 67-468 (402 bp) of NA, 1,318-1,902 (585 bp) of PB2, 1,135-1,610 (476 bp) of PB1, 756-1,167 (412 bp) of PA, 1,139-1,434 (296 bp) of NP, 55-893 (839 bp) of M, and 25-790 (766 bp) of NS were used for phylogenetic analysis. Horizontal distances are proportional to the minimum number of nucleotide differences required to join nodes and sequences. Numbers at the nodes indicate confidence levels in bootstrap analysis with 1,000 replications. Viruses isolated in this study are highlighted in gray. Representative viruses in each sublineage are underlined. Abbreviations: Ck, chicken; Dk, duck; Qa, quail; Ty, turkey; HK, Hong Kong; Hok, Hokkaido; Pak, Pakistan; and Wis, Wisconsin. a The nucleotide sequences of the HA genes of 11 isolates were the same as that of Dk/VN/OIE-2587/2009. The ID numbers of these 10 isolates are OIE-2448, OIE-2574, OIE-2575, OIE-2580, OIE-2581, OIE-2585, OIE-2586, OIE-2590, OIE-2591, and OIE-2594. b The nucleotide sequences of the HA genes of two isolates were the same as that of Dk/VN/OIE-2390/2009. The ID numbers of these two isolates are OIE-2322 and OIE-2323
Cross-reactivity between antisera and H9 viruses by HI testa
| Lineage | Sublineage | Virus | Antiserum to | |||||
|---|---|---|---|---|---|---|---|---|
| Korean | G1 | Y280 | North American | |||||
| Dk/Hok/49/1998 | Dk/Hok/13/2000 | Qa/HK/G1/1997 | Dk/HK/Y280/1997 | Ck/HK/G9/1997 | Ty/Wis/1/1966 | |||
| Eurasian | Korean | Dk/Hok/49/1998 |
| 2,560 | 80 | 320 | 320 | 640 |
| Dk/Hok/13/2000 | 5,120 |
| 40 | 320 | 320 | 320 | ||
| Dk/VN/OIE-2313/2009 | 640 | 2,560 | 640 | 640 | 320 | 320 | ||
| Dk/VN/OIE-2322/2009 | 1,280 | 1,280 | 320 | 320 | 320 | 160 | ||
| Dk/VN/OIE-2323/2009 | 640 | 1,280 | 640 | 640 | 320 | 320 | ||
| Dk/VN/OIE-2325/2009 | 640 | 1,280 | 640 | 640 | 160 | 320 | ||
| Dk/VN/OIE-2326/2009 | 1,280 | 2,560 | 640 | 320 | 320 | 160 | ||
| Dk/VN/OIE-2327/2009 | 640 | 1,280 | 320 | 640 | 320 | 320 | ||
| Dk/VN/OIE-2390/2009 | 1,280 | 1,280 | 320 | 640 | 320 | 320 | ||
| Dk/VN/OIE-2334/2010 | 5,120 | 5,120 | 320 | 640 | 320 | 640 | ||
| G1 | Qa/HK/G1/1997 | 1,280 | 1,280 |
| 1,280 | 640 | 320 | |
| Dk/VN/OIE-2328/2009 | 1,280 | 1,280 | 10,240 | 5,120 | 1,280 | 320 | ||
| Dk/VN/OIE-2448/2009 | 1,280 | 1,280 | 5,120 | 1,280 | 1,280 | 640 | ||
| Dk/VN/OIE-2574/2009 | 1,280 | 2,560 | 2,560 | 5,120 | 1,280 | 160 | ||
| Dk/VN/OIE-2575/2009 | 1,280 | 2,560 | 5,120 | 2,560 | 1,280 | 320 | ||
| Dk/VN/OIE-2576/2009 | 640 | 1,280 | 5,120 | 2,560 | 1,280 | 160 | ||
| Dk/VN/OIE-2580/2009 | 1,280 | 2,560 | 2,560 | 2,560 | 640 | 320 | ||
| Dk/VN/OIE-2581/2009 | 1,280 | 1,280 | 5,120 | 2,560 | 640 | 320 | ||
| Dk/VN/OIE-2582/2009 | 640 | 1,280 | 2,560 | 1,280 | 1,280 | 160 | ||
| Dk/VN/OIE-2583/2009 | 1,280 | 2,560 | 5,120 | 2,560 | 1,280 | 320 | ||
| Dk/VN/OIE-2584/2009 | 1,280 | 640 | 1,280 | 1,280 | 1,280 | 160 | ||
| Dk/VN/OIE-2585/2009 | 2,560 | 1,280 | 2,560 | 1,280 | 640 | 160 | ||
| Dk/VN/OIE-2586/2009 | 1,280 | 1,280 | 2,560 | 2,560 | 1,280 | 160 | ||
| Dk/VN/OIE-2587/2009 | 1,280 | 2,560 | 5,120 | 5,120 | 640 | 160 | ||
| Dk/VN/OIE-2590/2009 | 2,560 | 2,560 | 1,280 | 1,280 | 320 | 160 | ||
| Dk/VN/OIE-2591/2009 | 1,280 | 2,560 | 1,280 | 1,280 | 640 | 320 | ||
| Dk/VN/OIE-2592/2009 | 640 | 1,280 | 5,120 | 1,280 | 640 | 320 | ||
| Dk/VN/OIE-2593/2009 | 640 | 640 | 2,560 | 1,280 | 320 | 160 | ||
| Dk/VN/OIE-2594/2009 | 1,280 | 1,280 | 2,560 | 5,120 | 1,280 | 160 | ||
| Dk/VN/OIE-2595/2009 | 1,280 | 1,280 | 2,560 | 2,560 | 1,280 | 320 | ||
| Y280 | Dk/HK/Y280/1997 | 2,560 | 5,120 | 5,120 |
| 20,480 | 40 | |
| Ck/HK/G9/1997 | 1,280 | 2,560 | 2,560 | 10,240 |
| 320 | ||
| Dk/HK/W213/1998 | 1,280 | 2,560 | 2,560 | 20,480 | 40,960 | 80 | ||
| North American | Ty/Wis/1/1966 | 320 | 320 | <20 | 20 | 80 |
| |
aHomologous reactions are underlined
Virus titers of the laryngopharyngeal and cloacal swabs and antibody responses of ducks inoculated with H9N2 virusesa
| Virus | Animal no. | Swab | Virus titer on the following d.p.i.b (log EID50/ml) | Serum antibody titerc | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | ||||
| Dk/VN/ OIE-2327/2009 | #1 | Laryngopharyngeal | – | – | – | 0.7 | 1.5 | – | – | – | 80 |
| Cloacal | – | – | – | – | – | – | – | – | |||
| #2 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 160 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
| #3 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 160 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
| Dk/VN/ OIE-2328/2009 | #4 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 80 |
| Cloacal | – | – | – | – | – | – | – | – | |||
| #5 | Laryngopharyngeal | – | – | – | 0.8 | – | – | – | – | 160 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
| #6 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 80 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
| Dk/VN/ OIE-2583/2009 | #7 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 80 |
| Cloacal | – | – | – | – | – | 0.7 | – | – | |||
| #8 | Laryngopharyngeal | – | 1.7 | – | 1.3 | – | – | – | – | 40 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
| #9 | Laryngopharyngeal | – | – | – | – | – | – | – | – | 80 | |
| Cloacal | – | – | – | – | – | – | – | – | |||
aLaryngopharyngeal and cloacal swabs of three inoculated ducks were collected daily from 1 to 7 d.p.i
bBar (–) indicate that virus was not detected
cHI antibody titers to the inoculated viruses at 14 d.p.i
Virus isolation from nasal swabs of pigs inoculated with H9N2 virusesa
| Virus | Animal no. | Virus titer on the following d.p.i. (log EID50/ml) | Serum antibody titer | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | |||
| Dk/VN/OIE-2327/2009 | #1 | - | - | - | - | - | - | - | - | - |
| #2 | - | - | 2.7 | 1.5 | 2.5 | 2.7 | 1.5 | - | 640 | |
| Dk/VN/OIE-2328/2009 | #3 | - | - | 3.8 | - | 5.3 | 4.3 | 2.7 | 1.7 | 320 |
| #4 | - | 3.5 | 3.5 | 1.8 | 4.3 | 4.5 | 3.5 | 3.0 | 640 | |
| Dk/VN/OIE-2583/2009 | #5 | - | 5.0 | 3.5 | 2.8 | 4.3 | 3.8 | 2.8 | 1.5 | 320 |
| #6 | - | 4.3 | 3.8 | 3.7 | 4.8 | 3.8 | 1.8 | - | 320 | |
aNasal swabs of two inoculated pigs were collected daily from 1 to 7 d.p.i., -:< 0.5. Antibody responses to the inoculated viruses in pigs at 14 d.p.i. were examined by ELISA
Fig. 3Changes in body weight of mice inoculated with influenza viruses. Five mice were inoculated intranasally with Dk/VN/OIE-2327/2009, Dk/VN/OIE-2328/2009, and Dk/VN/OIE-2583/2009. The body weight of the mice was monitored for 14 days after inoculation with each influenza virus. Data are shown as averages of body weight changes in each group with the corresponding standard deviation
Virus titers of the lungs of mice inoculated with H9N2 viruses
| Virus | Animal no. | Virus titera (log EID50/g) |
|---|---|---|
| Dk/VN/OIE-2327/2009 | #1 | – |
| #2 | – | |
| #3 | – | |
| #4 | – | |
| #5 | – | |
| Dk/VN/OIE-2328/2009 | #6 | 5.3 |
| #7 | 5.3 | |
| #8 | 5.3 | |
| #9 | 5.0 | |
| #10 | 5.7 | |
| Dk/VN/OIE-2583/2009 | #11 | 5.5 |
| #12 | 5.7 | |
| #13 | 5.8 | |
| #14 | 5.5 | |
| #15 | 5.3 |
aFive mice were sacrificed at 3 d.p.i., and the lungs were collected for virus titration. –: virus was not detected
Serum antibody responses of mice inoculated with H9N2 viruses
| Virus | Animal no. | Serum antibody titera |
|---|---|---|
| Dk/VN/OIE-2327/2009 | #16 | 40 |
| #17 | 40 | |
| #18 | 80 | |
| #19 | 40 | |
| #20 | 40 | |
| Dk/VN/OIE-2328/2009 | #21 | 20 |
| #22 | 80 | |
| #23 | 20 | |
| #24 | 40 | |
| #25 | 40 | |
| Dk/VN/OIE-2583/2009 | #26 | 40 |
| #27 | 40 | |
| #28 | 40 | |
| #29 | 80 | |
| #30 | 80 |
aHI antibody titer to the inoculated viruses at 14 d.p.i