Literature DB >> 22068825

A method for analysis of lipid vesicle domain structure from confocal image data.

Peter Husen1, Matthias Fidorra, Steffen Härtel, Luis A Bagatolli, John H Ipsen.   

Abstract

Quantitative characterization of the lateral structure of curved membranes based on fluorescence microscopy requires knowledge of the fluorophore distribution on the surface. We present an image analysis approach for extraction of the fluorophore distribution on a spherical lipid vesicle from confocal imaging stacks. The technique involves projection of volumetric image data onto a triangulated surface mesh representation of the membrane, correction of photoselection effects and global motion of the vesicle during image acquisition and segmentation of the surface into domains using histograms. The analysis allows for investigation of the morphology and size distribution of domains on the surface.

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Year:  2011        PMID: 22068825     DOI: 10.1007/s00249-011-0768-2

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  18 in total

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3.  Texture of lipid bilayer domains.

Authors:  Uffe Bernchou; Jonathan Brewer; Henrik S Midtiby; John H Ipsen; Luis A Bagatolli; Adam C Simonsen
Journal:  J Am Chem Soc       Date:  2009-10-14       Impact factor: 15.419

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Authors:  M Fidorra; L Duelund; C Leidy; A C Simonsen; L A Bagatolli
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

5.  Lipid rafts reconstituted in model membranes.

Authors:  C Dietrich; L A Bagatolli; Z N Volovyk; N L Thompson; M Levi; K Jacobson; E Gratton
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

6.  Raft partitioning and dynamic behavior of human placental alkaline phosphatase in giant unilamellar vesicles.

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Journal:  Biochemistry       Date:  2005-05-24       Impact factor: 3.162

7.  Quantitative characterization of coexisting phases in DOPC/DPPC/cholesterol mixtures: comparing confocal fluorescence microscopy and deuterium nuclear magnetic resonance.

Authors:  Janos Juhasz; Frances J Sharom; James H Davis
Journal:  Biochim Biophys Acta       Date:  2009-10-23

8.  Lipid domains in giant unilamellar vesicles and their correspondence with equilibrium thermodynamic phases: a quantitative fluorescence microscopy imaging approach.

Authors:  M Fidorra; A Garcia; J H Ipsen; S Härtel; L A Bagatolli
Journal:  Biochim Biophys Acta       Date:  2009-08-21

9.  Line tensions, correlation lengths, and critical exponents in lipid membranes near critical points.

Authors:  Aurelia R Honerkamp-Smith; Pietro Cicuta; Marcus D Collins; Sarah L Veatch; Marcel den Nijs; M Schick; Sarah L Keller
Journal:  Biophys J       Date:  2008-04-18       Impact factor: 4.033

10.  Cholesterol rules: direct observation of the coexistence of two fluid phases in native pulmonary surfactant membranes at physiological temperatures.

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Journal:  J Biol Chem       Date:  2004-07-01       Impact factor: 5.157

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  3 in total

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2.  Morphometric image analysis of giant vesicles: a new tool for quantitative thermodynamics studies of phase separation in lipid membranes.

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Journal:  Biophys J       Date:  2012-12-05       Impact factor: 4.033

3.  Movement of giant lipid vesicles induced by millimeter wave radiation change when they contain magnetic nanoparticles.

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Journal:  Drug Deliv Transl Res       Date:  2019-02       Impact factor: 4.617

  3 in total

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