Literature DB >> 22068533

Primate genomes for biomedicine.

Steven E Bosinger, Zachary P Johnson, Guido Silvestri.   

Abstract

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Year:  2011        PMID： 22068533      PMCID： PMC4449136          DOI： 10.1038/nbt.2032

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  10 in total

1.  Initial sequencing and analysis of the human genome.

Authors:  E S Lander; L M Linton; B Birren; C Nusbaum; M C Zody; J Baldwin; K Devon; K Dewar; M Doyle; W FitzHugh; R Funke; D Gage; K Harris; A Heaford; J Howland; L Kann; J Lehoczky; R LeVine; P McEwan; K McKernan; J Meldrim; J P Mesirov; C Miranda; W Morris; J Naylor; C Raymond; M Rosetti; R Santos; A Sheridan; C Sougnez; Y Stange-Thomann; N Stojanovic; A Subramanian; D Wyman; J Rogers; J Sulston; R Ainscough; S Beck; D Bentley; J Burton; C Clee; N Carter; A Coulson; R Deadman; P Deloukas; A Dunham; I Dunham; R Durbin; L French; D Grafham; S Gregory; T Hubbard; S Humphray; A Hunt; M Jones; C Lloyd; A McMurray; L Matthews; S Mercer; S Milne; J C Mullikin; A Mungall; R Plumb; M Ross; R Shownkeen; S Sims; R H Waterston; R K Wilson; L W Hillier; J D McPherson; M A Marra; E R Mardis; L A Fulton; A T Chinwalla; K H Pepin; W R Gish; S L Chissoe; M C Wendl; K D Delehaunty; T L Miner; A Delehaunty; J B Kramer; L L Cook; R S Fulton; D L Johnson; P J Minx; S W Clifton; T Hawkins; E Branscomb; P Predki; P Richardson; S Wenning; T Slezak; N Doggett; J F Cheng; A Olsen; S Lucas; C Elkin; E Uberbacher; M Frazier; R A Gibbs; D M Muzny; S E Scherer; J B Bouck; E J Sodergren; K C Worley; C M Rives; J H Gorrell; M L Metzker; S L Naylor; R S Kucherlapati; D L Nelson; G M Weinstock; Y Sakaki; A Fujiyama; M Hattori; T Yada; A Toyoda; T Itoh; C Kawagoe; H Watanabe; Y Totoki; T Taylor; J Weissenbach; R Heilig; W Saurin; F Artiguenave; P Brottier; T Bruls; E Pelletier; C Robert; P Wincker; D R Smith; L Doucette-Stamm; M Rubenfield; K Weinstock; H M Lee; J Dubois; A Rosenthal; M Platzer; G Nyakatura; S Taudien; A Rump; H Yang; J Yu; J Wang; G Huang; J Gu; L Hood; L Rowen; A Madan; S Qin; R W Davis; N A Federspiel; A P Abola; M J Proctor; R M Myers; J Schmutz; M Dickson; J Grimwood; D R Cox; M V Olson; R Kaul; C Raymond; N Shimizu; K Kawasaki; S Minoshima; G A Evans; M Athanasiou; R Schultz; B A Roe; F Chen; H Pan; J Ramser; H Lehrach; R Reinhardt; W R McCombie; M de la Bastide; N Dedhia; H Blöcker; K Hornischer; G Nordsiek; R Agarwala; L Aravind; J A Bailey; A Bateman; S Batzoglou; E Birney; P Bork; D G Brown; C B Burge; L Cerutti; H C Chen; D Church; M Clamp; R R Copley; T Doerks; S R Eddy; E E Eichler; T S Furey; J Galagan; J G Gilbert; C Harmon; Y Hayashizaki; D Haussler; H Hermjakob; K Hokamp; W Jang; L S Johnson; T A Jones; S Kasif; A Kaspryzk; S Kennedy; W J Kent; P Kitts; E V Koonin; I Korf; D Kulp; D Lancet; T M Lowe; A McLysaght; T Mikkelsen; J V Moran; N Mulder; V J Pollara; C P Ponting; G Schuler; J Schultz; G Slater; A F Smit; E Stupka; J Szustakowki; D Thierry-Mieg; J Thierry-Mieg; L Wagner; J Wallis; R Wheeler; A Williams; Y I Wolf; K H Wolfe; S P Yang; R F Yeh; F Collins; M S Guyer; J Peterson; A Felsenfeld; K A Wetterstrand; A Patrinos; M J Morgan; P de Jong; J J Catanese; K Osoegawa; H Shizuya; S Choi; Y J Chen; J Szustakowki
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  Genome-based analysis of the nonhuman primate Macaca fascicularis as a model for drug safety assessment.

Authors:  Martin Ebeling; Erich Küng; Angela See; Clemens Broger; Guido Steiner; Marco Berrera; Tobias Heckel; Leonardo Iniguez; Thomas Albert; Roland Schmucki; Hermann Biller; Thomas Singer; Ulrich Certa
Journal:  Genome Res       Date:  2011-08-23       Impact factor: 9.043

3.  Initial sequence of the chimpanzee genome and comparison with the human genome.

Authors: 
Journal:  Nature       Date:  2005-09-01       Impact factor: 49.962

4.  Evolutionary and biomedical insights from the rhesus macaque genome.

Authors:  Richard A Gibbs; Jeffrey Rogers; Michael G Katze; Roger Bumgarner; George M Weinstock; Elaine R Mardis; Karin A Remington; Robert L Strausberg; J Craig Venter; Richard K Wilson; Mark A Batzer; Carlos D Bustamante; Evan E Eichler; Matthew W Hahn; Ross C Hardison; Kateryna D Makova; Webb Miller; Aleksandar Milosavljevic; Robert E Palermo; Adam Siepel; James M Sikela; Tony Attaway; Stephanie Bell; Kelly E Bernard; Christian J Buhay; Mimi N Chandrabose; Marvin Dao; Clay Davis; Kimberly D Delehaunty; Yan Ding; Huyen H Dinh; Shannon Dugan-Rocha; Lucinda A Fulton; Ramatu Ayiesha Gabisi; Toni T Garner; Jennifer Godfrey; Alicia C Hawes; Judith Hernandez; Sandra Hines; Michael Holder; Jennifer Hume; Shalini N Jhangiani; Vandita Joshi; Ziad Mohid Khan; Ewen F Kirkness; Andrew Cree; R Gerald Fowler; Sandra Lee; Lora R Lewis; Zhangwan Li; Yih-Shin Liu; Stephanie M Moore; Donna Muzny; Lynne V Nazareth; Dinh Ngoc Ngo; Geoffrey O Okwuonu; Grace Pai; David Parker; Heidie A Paul; Cynthia Pfannkoch; Craig S Pohl; Yu-Hui Rogers; San Juana Ruiz; Aniko Sabo; Jireh Santibanez; Brian W Schneider; Scott M Smith; Erica Sodergren; Amanda F Svatek; Teresa R Utterback; Selina Vattathil; Wesley Warren; Courtney Sherell White; Asif T Chinwalla; Yucheng Feng; Aaron L Halpern; Ladeana W Hillier; Xiaoqiu Huang; Pat Minx; Joanne O Nelson; Kymberlie H Pepin; Xiang Qin; Granger G Sutton; Eli Venter; Brian P Walenz; John W Wallis; Kim C Worley; Shiaw-Pyng Yang; Steven M Jones; Marco A Marra; Mariano Rocchi; Jacqueline E Schein; Robert Baertsch; Laura Clarke; Miklós Csürös; Jarret Glasscock; R Alan Harris; Paul Havlak; Andrew R Jackson; Huaiyang Jiang; Yue Liu; David N Messina; Yufeng Shen; Henry Xing-Zhi Song; Todd Wylie; Lan Zhang; Ewan Birney; Kyudong Han; Miriam K Konkel; Jungnam Lee; Arian F A Smit; Brygg Ullmer; Hui Wang; Jinchuan Xing; Richard Burhans; Ze Cheng; John E Karro; Jian Ma; Brian Raney; Xinwei She; Michael J Cox; Jeffery P Demuth; Laura J Dumas; Sang-Gook Han; Janet Hopkins; Anis Karimpour-Fard; Young H Kim; Jonathan R Pollack; Tomas Vinar; Charles Addo-Quaye; Jeremiah Degenhardt; Alexandra Denby; Melissa J Hubisz; Amit Indap; Carolin Kosiol; Bruce T Lahn; Heather A Lawson; Alison Marklein; Rasmus Nielsen; Eric J Vallender; Andrew G Clark; Betsy Ferguson; Ryan D Hernandez; Kashif Hirani; Hildegard Kehrer-Sawatzki; Jessica Kolb; Shobha Patil; Ling-Ling Pu; Yanru Ren; David Glenn Smith; David A Wheeler; Ian Schenck; Edward V Ball; Rui Chen; David N Cooper; Belinda Giardine; Fan Hsu; W James Kent; Arthur Lesk; David L Nelson; William E O'brien; Kay Prüfer; Peter D Stenson; James C Wallace; Hui Ke; Xiao-Ming Liu; Peng Wang; Andy Peng Xiang; Fan Yang; Galt P Barber; David Haussler; Donna Karolchik; Andy D Kern; Robert M Kuhn; Kayla E Smith; Ann S Zwieg
Journal:  Science       Date:  2007-04-13       Impact factor: 47.728

5.  Contributions of Mamu-A*01 status and TRIM5 allele expression, but not CCL3L copy number variation, to the control of SIVmac251 replication in Indian-origin rhesus monkeys.

Authors:  So-Yon Lim; Tiffany Chan; Rebecca S Gelman; James B Whitney; Kara L O'Brien; Dan H Barouch; David B Goldstein; Barton F Haynes; Norman L Letvin
Journal:  PLoS Genet       Date:  2010-06-24       Impact factor: 5.917

6.  TRIM5 suppresses cross-species transmission of a primate immunodeficiency virus and selects for emergence of resistant variants in the new species.

Authors:  Andrea Kirmaier; Fan Wu; Ruchi M Newman; Laura R Hall; Jennifer S Morgan; Shelby O'Connor; Preston A Marx; Mareike Meythaler; Simoy Goldstein; Alicia Buckler-White; Amitinder Kaur; Vanessa M Hirsch; Welkin E Johnson
Journal:  PLoS Biol       Date:  2010-08-24       Impact factor: 8.029

Review 7.  Monkeying around with HIV vaccines: using rhesus macaques to define 'gatekeepers' for clinical trials.

Authors:  Devon J Shedlock; Guido Silvestri; David B Weiner
Journal:  Nat Rev Immunol       Date:  2009-10       Impact factor: 53.106

8.  Comparative and demographic analysis of orang-utan genomes.

Authors:  Devin P Locke; LaDeana W Hillier; Wesley C Warren; Kim C Worley; Lynne V Nazareth; Donna M Muzny; Shiaw-Pyng Yang; Zhengyuan Wang; Asif T Chinwalla; Pat Minx; Makedonka Mitreva; Lisa Cook; Kim D Delehaunty; Catrina Fronick; Heather Schmidt; Lucinda A Fulton; Robert S Fulton; Joanne O Nelson; Vincent Magrini; Craig Pohl; Tina A Graves; Chris Markovic; Andy Cree; Huyen H Dinh; Jennifer Hume; Christie L Kovar; Gerald R Fowler; Gerton Lunter; Stephen Meader; Andreas Heger; Chris P Ponting; Tomas Marques-Bonet; Can Alkan; Lin Chen; Ze Cheng; Jeffrey M Kidd; Evan E Eichler; Simon White; Stephen Searle; Albert J Vilella; Yuan Chen; Paul Flicek; Jian Ma; Brian Raney; Bernard Suh; Richard Burhans; Javier Herrero; David Haussler; Rui Faria; Olga Fernando; Fleur Darré; Domènec Farré; Elodie Gazave; Meritxell Oliva; Arcadi Navarro; Roberta Roberto; Oronzo Capozzi; Nicoletta Archidiacono; Giuliano Della Valle; Stefania Purgato; Mariano Rocchi; Miriam K Konkel; Jerilyn A Walker; Brygg Ullmer; Mark A Batzer; Arian F A Smit; Robert Hubley; Claudio Casola; Daniel R Schrider; Matthew W Hahn; Victor Quesada; Xose S Puente; Gonzalo R Ordoñez; Carlos López-Otín; Tomas Vinar; Brona Brejova; Aakrosh Ratan; Robert S Harris; Webb Miller; Carolin Kosiol; Heather A Lawson; Vikas Taliwal; André L Martins; Adam Siepel; Arindam Roychoudhury; Xin Ma; Jeremiah Degenhardt; Carlos D Bustamante; Ryan N Gutenkunst; Thomas Mailund; Julien Y Dutheil; Asger Hobolth; Mikkel H Schierup; Oliver A Ryder; Yuko Yoshinaga; Pieter J de Jong; George M Weinstock; Jeffrey Rogers; Elaine R Mardis; Richard A Gibbs; Richard K Wilson
Journal:  Nature       Date:  2011-01-27       Impact factor: 69.504

9.  Low levels of SIV infection in sooty mangabey central memory CD⁴⁺ T cells are associated with limited CCR5 expression.

Authors:  Mirko Paiardini; Barbara Cervasi; Elane Reyes-Aviles; Luca Micci; Alexandra M Ortiz; Ann Chahroudi; Carol Vinton; Shari N Gordon; Steven E Bosinger; Nicholas Francella; Paul L Hallberg; Elizabeth Cramer; Timothy Schlub; Ming Liang Chan; Nadeene E Riddick; Ronald G Collman; Cristian Apetrei; Ivona Pandrea; James Else; Jan Munch; Frank Kirchhoff; Miles P Davenport; Jason M Brenchley; Guido Silvestri
Journal:  Nat Med       Date:  2011-06-26       Impact factor: 53.440

10.  Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque.

Authors:  Xiaodong Fang; Yanfeng Zhang; Rui Zhang; Lixin Yang; Ming Li; Kaixiong Ye; Xiaosen Guo; Jun Wang; Bing Su
Journal:  Genome Biol       Date:  2011-07-06       Impact factor: 13.583
  10 in total
  1 in total

1.  Expression sequence tag library derived from peripheral blood mononuclear cells of the chlorocebus sabaeus.

Authors:  Nicolas Tchitchek; Béatrice Jacquelin; Patrick Wincker; Carole Dossat; Corinne Da Silva; Jean Weissenbach; Antoine Blancher; Michaela Müller-Trutwin; Arndt Benecke
Journal:  BMC Genomics       Date:  2012-06-22       Impact factor: 3.969
  1 in total

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