Literature DB >> 22067746

GH11 xylanases: Structure/function/properties relationships and applications.

Gabriel Paës1, Jean-Guy Berrin, Johnny Beaugrand.   

Abstract

For technical, environmental and economical reasons, industrial demands for process-fitted enzymes have evolved drastically in the last decade. Therefore, continuous efforts are made in order to get insights into enzyme structure/function relationships to create improved biocatalysts. Xylanases are hemicellulolytic enzymes, which are responsible for the degradation of the heteroxylans constituting the lignocellulosic plant cell wall. Due to their variety, xylanases have been classified in glycoside hydrolase families GH5, GH8, GH10, GH11, GH30 and GH43 in the CAZy database. In this review, we focus on GH11 family, which is one of the best characterized GH families with bacterial and fungal members considered as true xylanases compared to the other families because of their high substrate specificity. Based on an exhaustive analysis of the sequences and 3D structures available so far, in relation with biochemical properties, we assess biochemical aspects of GH11 xylanases: structure, catalytic machinery, focus on their "thumb" loop of major importance in catalytic efficiency and substrate selectivity, inhibition, stability to pH and temperature. GH11 xylanases have for a long time been used as biotechnological tools in various industrial applications and represent in addition promising candidates for future other uses. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22067746     DOI: 10.1016/j.biotechadv.2011.10.003

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  76 in total

1.  Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography.

Authors:  Qun Wan; Jerry M Parks; B Leif Hanson; Suzanne Zoe Fisher; Andreas Ostermann; Tobias E Schrader; David E Graham; Leighton Coates; Paul Langan; Andrey Kovalevsky
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-21       Impact factor: 11.205

2.  Fiber-associated spirochetes are major agents of hemicellulose degradation in the hindgut of wood-feeding higher termites.

Authors:  Gaku Tokuda; Aram Mikaelyan; Chiho Fukui; Yu Matsuura; Hirofumi Watanabe; Masahiro Fujishima; Andreas Brune
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-30       Impact factor: 11.205

3.  Distinct roles for carbohydrate-binding modules of glycoside hydrolase 10 (GH10) and GH11 xylanases from Caldicellulosiruptor sp. strain F32 in thermostability and catalytic efficiency.

Authors:  Dong-Dong Meng; Yu Ying; Xiao-Hua Chen; Ming Lu; Kang Ning; Lu-Shan Wang; Fu-Li Li
Journal:  Appl Environ Microbiol       Date:  2015-01-09       Impact factor: 4.792

4.  Refolding the unfoldable: A systematic approach for renaturation of Bacillus circulans xylanase.

Authors:  Miriam P Kötzler; Lawrence P McIntosh; Stephen G Withers
Journal:  Protein Sci       Date:  2017-05-11       Impact factor: 6.725

5.  Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome.

Authors:  Ana Camila Andrade; Adriana Fróes; Fabyano Álvares Cardoso Lopes; Fabiano L Thompson; Ricardo Henrique Krüger; Elizabeth Dinsdale; Thiago Bruce
Journal:  Microb Ecol       Date:  2017-01-09       Impact factor: 4.552

6.  Ligand Binding Enhances Millisecond Conformational Exchange in Xylanase B2 from Streptomyces lividans.

Authors:  Donald Gagné; Chitra Narayanan; Nhung Nguyen-Thi; Louise D Roux; David N Bernard; Joseph S Brunzelle; Jean-François Couture; Pratul K Agarwal; Nicolas Doucet
Journal:  Biochemistry       Date:  2016-07-21       Impact factor: 3.162

7.  Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.

Authors:  Ya-Shan Cheng; Chun-Chi Chen; Chun-Hsiang Huang; Tzu-Ping Ko; Wenhua Luo; Jian-Wen Huang; Je-Ruei Liu; Rey-Ting Guo
Journal:  J Biol Chem       Date:  2014-03-11       Impact factor: 5.157

Review 8.  Molecular structure and catalytic mechanism of fungal family G acidophilic xylanases.

Authors:  Protyusha Dey; Amit Roy
Journal:  3 Biotech       Date:  2018-01-15       Impact factor: 2.406

9.  Two Distinct α-l-Arabinofuranosidases in Caldicellulosiruptor Species Drive Degradation of Arabinose-Based Polysaccharides.

Authors:  Mohammad Abu Saleh; Wen-Jie Han; Ming Lu; Bing Wang; Huayue Li; Robert M Kelly; Fu-Li Li
Journal:  Appl Environ Microbiol       Date:  2017-06-16       Impact factor: 4.792

10.  An Arabidopsis cell wall proteoglycan consists of pectin and arabinoxylan covalently linked to an arabinogalactan protein.

Authors:  Li Tan; Stefan Eberhard; Sivakumar Pattathil; Clayton Warder; John Glushka; Chunhua Yuan; Zhangying Hao; Xiang Zhu; Utku Avci; Jeffrey S Miller; David Baldwin; Charles Pham; Ronald Orlando; Alan Darvill; Michael G Hahn; Marcia J Kieliszewski; Debra Mohnen
Journal:  Plant Cell       Date:  2013-01-31       Impact factor: 11.277

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