Literature DB >> 22065634

catena-Poly[[diaquaterbium(III)]-tetrakis(μ(2)-pyridine-4-carboxylato-κO:O')-[diaquaterbium(III)]-bis(μ(2)-pyridine-4-carboxylato-κO:O')].

Xiangfei Zhang1, Bin Zhai.   

Abstract

The title complex, [Tb(2)(C(6)H(4)NO(2))(6)(H(2)O)(4)](n), was isolated under hydro-thermal conditions using the ligand pyridine-4-carb-oxy-lic acid (HL) and Tb(2)O(3). The deprotonated L(2-) ligands adopt bridging coordination modes. The central Tb(III) atom is bridged by L(2-) ligands, forming a polymeric chain parallel to the a axis. Supra-molecular O-H⋯N inter-actions link the chains, building up a layer parallel to (010). O-H⋯O hydrogen bonds also occur. Two of the pyridine rings are disordered by rotation around the central C-N direction with occupancy ratios of 0.53 (1):0.47 (1).

Entities:  

Year:  2011        PMID: 22065634      PMCID: PMC3201511          DOI: 10.1107/S1600536811038487

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties of metal-organic coordination polymers, see: Bradshaw et al. (2004 ▶); Singh & Roesky (2007 ▶); Rosi et al. (2002 ▶); Thirumurugan & Natarajan (2005 ▶); Thirumurugan et al. (2008 ▶); Forster & Cheetham (2002 ▶); Fan & Zhu (2007 ▶).

Experimental

Crystal data

[Tb2(C6H4NO2)6(H2O)4] M = 1122.52 Monoclinic, a = 9.7008 (10) Å b = 19.813 (2) Å c = 11.6253 (12) Å β = 112.009 (1)° V = 2071.6 (4) Å3 Z = 2 Mo Kα radiation μ = 3.46 mm−1 T = 293 K 0.26 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.466, T max = 0.575 11208 measured reflections 4055 independent reflections 2998 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.105 S = 1.11 4055 reflections 259 parameters 148 restraints H-atom parameters constrained Δρmax = 0.78 e Å−3 Δρmin = −1.60 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536811038487/dn2711sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038487/dn2711Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Tb2(C6H4NO2)6(H2O)4]F(000) = 1096
Mr = 1122.52Dx = 1.800 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5467 reflections
a = 9.7008 (10) Åθ = 2.2–26.4°
b = 19.813 (2) ŵ = 3.46 mm1
c = 11.6253 (12) ÅT = 293 K
β = 112.009 (1)°Block, colourless
V = 2071.6 (4) Å30.26 × 0.20 × 0.18 mm
Z = 2
Bruker SMART CCD area-detector diffractometer4055 independent reflections
Radiation source: fine-focus sealed tube2998 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 26.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008)h = −11→11
Tmin = 0.466, Tmax = 0.575k = −10→24
11208 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0526P)2 + 5.420P] where P = (Fo2 + 2Fc2)/3
4055 reflections(Δ/σ)max = 0.012
259 parametersΔρmax = 0.78 e Å3
148 restraintsΔρmin = −1.60 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The ISOR instruction are used for C16 C16' C17' C5 C5' C15 C15' C18' atoms to insolve their ADP alerts. The instructions of DFIX and DANG are used for H atoms on O7 and O8 water molecules, in order to place H atoms of water molecules in calculated positions as rigiding atoms. The SIMU and DELU instructions against C16 N3 C13 O6 C1 O2 atoms are used for insolveing their ADP alerts. In addition, the disordered C3 C4 C5 C6 and C3' C4' C5' C6' atoms are localized by the differece Fourier map, which are treated as disordered part with 0.5 occupancy. Whereas, the C15 C16 C17 C18 and C15' C16' C17' C18' atoms are treated as disordered part with free refinement.
xyzUiso*/UeqOcc. (<1)
Tb10.28030 (2)0.499202 (11)0.50935 (2)0.01827 (11)
O10.3953 (4)0.61276 (17)0.5299 (3)0.0248 (8)
O20.5886 (4)0.60949 (17)0.4690 (3)0.0270 (8)
O30.3869 (4)0.49073 (17)0.3515 (3)0.0253 (8)
O40.5557 (4)0.49956 (19)0.2667 (4)0.0324 (10)
O50.0756 (4)0.43450 (17)0.3615 (3)0.0235 (8)
O6−0.1256 (4)0.43637 (18)0.4071 (3)0.0274 (8)
O70.1132 (4)0.57515 (17)0.3392 (3)0.0262 (8)
H710.13770.61480.32900.039*
H720.06020.56330.26670.039*
O80.1792 (4)0.41684 (18)0.6284 (3)0.0267 (8)
H810.23440.39990.69750.040*
H820.09490.42330.63250.040*
N20.1002 (5)0.4546 (3)−0.1043 (4)0.0355 (12)
C10.5085 (5)0.6369 (2)0.5182 (4)0.0191 (10)
C20.5552 (6)0.7071 (3)0.5691 (5)0.0263 (11)
C30.5412 (18)0.7272 (6)0.6767 (14)0.065 (2)0.53
H30.49910.69880.71830.078*0.53
C40.5922 (18)0.7922 (6)0.7231 (14)0.065 (2)0.53
H40.58500.80490.79760.078*0.53
N10.6468 (7)0.8341 (3)0.6704 (7)0.0652 (19)
C50.6418 (18)0.8184 (6)0.5577 (13)0.065 (2)0.53
H50.66080.85190.50930.078*0.53
C60.6088 (18)0.7530 (6)0.5098 (14)0.065 (2)0.53
H60.62360.74100.43790.078*0.53
C3'0.4669 (18)0.7485 (7)0.6043 (18)0.065 (2)0.47
H3'0.37160.73490.59490.078*0.47
C4'0.5197 (17)0.8116 (7)0.6545 (18)0.065 (2)0.47
H4'0.45660.83890.67780.078*0.47
C5'0.7305 (18)0.7961 (7)0.6254 (18)0.065 (2)0.47
H5'0.82000.81390.62730.078*0.47
C6'0.6903 (17)0.7308 (7)0.5758 (18)0.065 (2)0.47
H6'0.75270.70520.54900.078*0.47
C70.4248 (6)0.4912 (2)0.2593 (5)0.0205 (11)
C80.3085 (5)0.4796 (3)0.1332 (4)0.0201 (10)
C90.3287 (7)0.5057 (3)0.0274 (5)0.0286 (12)
H9A0.41130.53170.03440.034*
C100.2195 (7)0.4908 (3)−0.0881 (5)0.0353 (15)
H10A0.23190.5076−0.15830.042*
C110.0841 (6)0.4311 (3)−0.0041 (5)0.0392 (15)
H11A0.00130.4045−0.01460.047*
C120.1823 (6)0.4436 (3)0.1157 (5)0.0304 (12)
H12A0.16260.42760.18320.037*
C13−0.0423 (5)0.4099 (2)0.3623 (4)0.0148 (9)
C14−0.0838 (6)0.3403 (3)0.3060 (5)0.0251 (11)
C15−0.061 (2)0.3205 (7)0.2026 (15)0.067 (2)0.47
H15−0.01410.34880.16470.080*0.47
C16−0.110 (2)0.2552 (6)0.1541 (16)0.067 (2)0.47
H16−0.11380.24520.07480.080*0.47
N3−0.1491 (7)0.2101 (3)0.2112 (6)0.0647 (19)
C17−0.186 (2)0.2304 (7)0.3059 (16)0.067 (2)0.47
H17−0.23000.19960.34160.080*0.47
C18−0.1591 (19)0.2972 (7)0.3543 (17)0.067 (2)0.47
H18−0.19160.31120.41620.080*0.47
C15'0.0235 (16)0.3043 (6)0.2749 (17)0.067 (2)0.53
H15'0.11590.32290.28700.080*0.53
C16'−0.0161 (15)0.2386 (6)0.2247 (17)0.067 (2)0.53
H16'0.05040.21440.20030.080*0.53
C17'−0.2435 (15)0.2459 (6)0.2278 (17)0.067 (2)0.53
H17'−0.33880.22850.20640.080*0.53
C18'−0.2165 (14)0.3119 (6)0.2774 (17)0.067 (2)0.53
H18'−0.29230.33560.29010.080*0.53
U11U22U33U12U13U23
Tb10.01824 (16)0.01848 (16)0.01805 (16)−0.00263 (9)0.00676 (11)−0.00260 (9)
O10.0188 (17)0.0176 (17)0.040 (2)−0.0057 (14)0.0135 (16)−0.0055 (15)
O20.029 (2)0.0208 (18)0.037 (2)0.0011 (16)0.0197 (17)−0.0011 (16)
O30.034 (2)0.031 (2)0.0143 (17)−0.0008 (15)0.0121 (16)−0.0015 (14)
O40.0171 (19)0.060 (3)0.0183 (19)−0.0084 (17)0.0044 (16)−0.0052 (17)
O50.0218 (18)0.0230 (18)0.0260 (19)−0.0100 (15)0.0092 (15)−0.0068 (15)
O60.0246 (18)0.0276 (19)0.035 (2)0.0016 (16)0.0164 (17)−0.0087 (17)
O70.0292 (19)0.0203 (18)0.0194 (17)−0.0051 (15)−0.0019 (15)0.0041 (14)
O80.0188 (17)0.035 (2)0.029 (2)0.0054 (15)0.0126 (15)0.0136 (16)
N20.029 (3)0.053 (3)0.017 (2)0.008 (2)−0.001 (2)−0.008 (2)
C10.019 (2)0.013 (2)0.023 (3)−0.0017 (19)0.004 (2)0.0002 (18)
C20.021 (2)0.023 (2)0.032 (3)−0.008 (2)0.006 (2)−0.007 (2)
C30.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C40.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
N10.069 (4)0.037 (3)0.097 (5)−0.030 (3)0.041 (4)−0.040 (3)
C50.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C60.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C3'0.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C4'0.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C5'0.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C6'0.074 (5)0.041 (3)0.094 (5)−0.032 (3)0.050 (4)−0.034 (3)
C70.022 (3)0.026 (3)0.011 (2)0.000 (2)0.004 (2)−0.0010 (19)
C80.018 (2)0.031 (3)0.010 (2)0.004 (2)0.005 (2)−0.001 (2)
C90.027 (3)0.047 (3)0.014 (2)−0.001 (2)0.010 (2)−0.001 (2)
C100.036 (3)0.056 (4)0.012 (3)0.012 (3)0.007 (2)0.001 (2)
C110.023 (3)0.055 (4)0.035 (3)−0.010 (3)0.005 (3)−0.011 (3)
C120.025 (3)0.046 (3)0.019 (3)−0.005 (3)0.008 (2)−0.003 (2)
C130.017 (2)0.012 (2)0.011 (2)−0.0018 (18)0.0005 (18)−0.0014 (17)
C140.021 (2)0.020 (2)0.031 (3)−0.003 (2)0.006 (2)−0.009 (2)
C150.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C160.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
N30.063 (4)0.032 (3)0.084 (5)−0.016 (3)0.011 (4)−0.031 (3)
C170.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C180.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C15'0.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C16'0.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C17'0.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
C18'0.061 (4)0.039 (3)0.108 (6)−0.021 (3)0.041 (4)−0.043 (4)
Tb1—O32.426 (4)C6—H60.9300
Tb1—O6i2.432 (3)C3'—C4'1.393 (14)
Tb1—O52.446 (3)C3'—H3'0.9300
Tb1—O2ii2.466 (3)C4'—H4'0.9300
Tb1—O12.483 (3)C5'—C6'1.410 (14)
Tb1—O4ii2.491 (4)C5'—H5'0.9300
Tb1—O72.530 (3)C6'—H6'0.9300
Tb1—O82.561 (3)C7—C81.495 (7)
O1—C11.250 (6)C8—C121.365 (7)
O2—C11.249 (5)C8—C91.414 (7)
O2—Tb1ii2.466 (3)C9—C101.395 (8)
O3—C71.258 (6)C9—H9A0.9300
O4—C71.250 (7)C10—H10A0.9300
O4—Tb1ii2.491 (4)C11—C121.383 (7)
O5—C131.247 (6)C11—H11A0.9300
O6—C131.232 (6)C12—H12A0.9300
O6—Tb1i2.432 (3)C13—C141.513 (6)
O7—H710.8413C14—C18'1.329 (12)
O7—H720.8403C14—C151.360 (13)
O8—H810.8508C14—C181.374 (14)
O8—H820.8460C14—C15'1.415 (12)
N2—C101.314 (8)C15—C161.421 (14)
N2—C111.316 (8)C15—H150.9300
C1—C21.513 (7)C16—N31.252 (14)
C2—C3'1.356 (13)C16—H160.9300
C2—C61.357 (12)N3—C17'1.230 (12)
C2—C6'1.367 (13)N3—C171.338 (14)
C2—C31.368 (12)N3—C16'1.362 (13)
C3—C41.411 (13)C17—C181.423 (14)
C3—H30.9300C17—H170.9300
C4—N11.261 (12)C18—H180.9300
C4—H40.9300C15'—C16'1.419 (13)
N1—C4'1.259 (13)C15'—H15'0.9300
N1—C51.331 (13)C16'—H16'0.9300
N1—C5'1.349 (13)C17'—C18'1.412 (13)
C5—C61.401 (13)C17'—H17'0.9300
C5—H50.9300C18'—H18'0.9300
O3—Tb1—O6i147.12 (12)C2—C3'—H3'120.1
O3—Tb1—O584.03 (12)C4'—C3'—H3'120.1
O6i—Tb1—O595.50 (12)N1—C4'—C3'124.5 (13)
O3—Tb1—O2ii70.56 (12)N1—C4'—H4'117.8
O6i—Tb1—O2ii142.13 (12)C3'—C4'—H4'117.8
O5—Tb1—O2ii82.30 (12)N1—C5'—C6'123.8 (12)
O3—Tb1—O180.33 (11)N1—C5'—H5'118.1
O6i—Tb1—O178.94 (12)C6'—C5'—H5'118.1
O5—Tb1—O1139.44 (12)C2—C6'—C5'116.9 (12)
O2ii—Tb1—O1125.85 (13)C2—C6'—H6'121.6
O3—Tb1—O4ii120.33 (13)C5'—C6'—H6'121.6
O6i—Tb1—O4ii79.95 (13)O4—C7—O3123.8 (5)
O5—Tb1—O4ii140.54 (12)O4—C7—C8117.5 (4)
O2ii—Tb1—O4ii78.39 (12)O3—C7—C8118.7 (5)
O1—Tb1—O4ii78.61 (12)C12—C8—C9118.1 (5)
O3—Tb1—O777.28 (12)C12—C8—C7122.1 (5)
O6i—Tb1—O771.90 (12)C9—C8—C7119.8 (5)
O5—Tb1—O769.43 (12)C10—C9—C8117.2 (6)
O2ii—Tb1—O7138.97 (12)C10—C9—H9A121.4
O1—Tb1—O770.70 (11)C8—C9—H9A121.4
O4ii—Tb1—O7141.47 (12)N2—C10—C9124.4 (5)
O3—Tb1—O8136.28 (12)N2—C10—H10A117.8
O6i—Tb1—O872.55 (12)C9—C10—H10A117.8
O5—Tb1—O870.81 (12)N2—C11—C12124.2 (5)
O2ii—Tb1—O871.07 (11)N2—C11—H11A117.9
O1—Tb1—O8140.79 (12)C12—C11—H11A117.9
O4ii—Tb1—O870.46 (12)C8—C12—C11118.9 (5)
O7—Tb1—O8122.57 (11)C8—C12—H12A120.5
C1—O1—Tb1135.8 (3)C11—C12—H12A120.5
C1—O2—Tb1ii135.9 (3)O6—C13—O5125.9 (4)
C7—O3—Tb1171.2 (4)O6—C13—C14117.5 (4)
C7—O4—Tb1ii107.9 (3)O5—C13—C14116.7 (4)
C13—O5—Tb1134.8 (3)C18'—C14—C1596.9 (10)
C13—O6—Tb1i173.6 (3)C18'—C14—C1839.1 (10)
Tb1—O7—H71122.2C15—C14—C18118.0 (9)
Tb1—O7—H72126.1C18'—C14—C15'117.3 (8)
H71—O7—H72102.6C15—C14—C15'41.4 (9)
Tb1—O8—H81122.0C18—C14—C15'110.2 (9)
Tb1—O8—H82120.6C18'—C14—C13124.7 (7)
H81—O8—H82106.6C15—C14—C13122.8 (7)
C10—N2—C11117.1 (5)C18—C14—C13119.0 (7)
O2—C1—O1127.3 (5)C15'—C14—C13117.9 (6)
O2—C1—C2115.6 (4)C14—C15—C16118.1 (13)
O1—C1—C2117.1 (4)C14—C15—H15120.9
C3'—C2—C698.8 (10)C16—C15—H15120.9
C3'—C2—C6'118.3 (8)N3—C16—C15124.2 (14)
C6—C2—C6'42.0 (9)N3—C16—H16117.9
C3'—C2—C342.0 (9)C15—C16—H16117.9
C6—C2—C3117.2 (8)C17'—N3—C1693.6 (12)
C6'—C2—C3105.6 (10)C17'—N3—C1741.9 (11)
C3'—C2—C1123.0 (7)C16—N3—C17116.6 (9)
C6—C2—C1122.2 (7)C17'—N3—C16'118.1 (9)
C6'—C2—C1118.7 (7)C16—N3—C16'46.0 (10)
C3—C2—C1120.5 (6)C17—N3—C16'108.1 (10)
C2—C3—C4118.3 (11)N3—C17—C18122.7 (13)
C2—C3—H3120.8N3—C17—H17118.6
C4—C3—H3120.8C18—C17—H17118.6
N1—C4—C3124.6 (12)C14—C18—C17117.5 (12)
N1—C4—H4117.7C14—C18—H18121.3
C3—C4—H4117.7C17—C18—H18121.3
C4'—N1—C443.1 (10)C14—C15'—C16'117.1 (11)
C4'—N1—C595.7 (11)C14—C15'—H15'121.4
C4—N1—C5117.2 (8)C16'—C15'—H15'121.4
C4'—N1—C5'116.3 (9)N3—C16'—C15'121.7 (11)
C4—N1—C5'104.1 (10)N3—C16'—H16'119.1
C5—N1—C5'44.9 (10)C15'—C16'—H16'119.1
N1—C5—C6121.8 (12)N3—C17'—C18'124.3 (12)
N1—C5—H5119.1N3—C17'—H17'117.9
C6—C5—H5119.1C18'—C17'—H17'117.9
C2—C6—C5119.5 (11)C14—C18'—C17'120.6 (11)
C2—C6—H6120.2C14—C18'—H18'119.7
C5—C6—H6120.2C17'—C18'—H18'119.7
C2—C3'—C4'119.7 (12)
D—H···AD—HH···AD···AD—H···A
O7—H71···N3iii0.841.962.787 (7)168.
O7—H72···N2iv0.841.982.802 (5)167.
O8—H81···N1v0.852.012.837 (7)163.
O8—H82···O7i0.852.163.002 (5)171.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O7—H71⋯N3i0.841.962.787 (7)168
O7—H72⋯N2ii0.841.982.802 (5)167
O8—H81⋯N1iii0.852.012.837 (7)163
O8—H82⋯O7iv0.852.163.002 (5)171

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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