Literature DB >> 22065566

Tetra-kis(picolinato-κN,O)zirconium(IV) dihydrate.

Maryke Steyn1, Hendrik G Visser, Andreas Roodt, T J Muller.   

Abstract

In the title compound, [Zr(n class="Chemical">C(6)H(4)NO(2))(4)]·2H(2)O, the Zr(IV) atom is located on a crystallographic fourfold rotoinversion axis ([Formula: see text]) and is coordinated by four picolinate anions with Zr-O and Zr-N distances of 2.120 (2) and 2.393 (2) Å, respectively. An approximate square-anti-prismatic coordination polyhedron of the N,O-coordination ligand atoms is formed, with a distortion towards dodeca-hedral geometry. The crystal packing is stabilized by inter-molecular π-π inter-actions between adjacent picolinate rings [centroid-centroid distances = 3.271 (1) and 3.640 (2) Å], as well as O-H⋯O hydrogen bonds between the solvent mol-ecules and the coordinated ligands, thereby linking the mol-ecules into a supra-molecular three-dimensional network.

Entities:  

Year:  2011        PMID: 22065566      PMCID: PMC3200838          DOI: 10.1107/S1600536811031710

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For N,O- and O,O′-bidentate ligand complexes of zirconium and hafnium, see: Steyn et al. (2008 ▶); Viljoen et al. (2010 ▶). For relevant studies of N,O- and O,O′-bidentate ligands with other transition metal atoms, see: Graham et al. (1991 ▶); Mtshali et al. (2006 ▶); Roodt et al. (2011 ▶); Schutte et al. (2008 ▶); Steyn et al. (1997 ▶); Van Aswegen et al. (1991 ▶); Van der Westhuizen et al. (2010 ▶).

Experimental

Crystal data

[Zr(C6H4NO2)4]·2H2O M = 615.66 Tetragonal, a = 11.083 (5) Å c = 9.548 (5) Å V = 1172.8 (10) Å3 Z = 2 Mo Kα radiation μ = 0.54 mm−1 T = 100 K 0.12 × 0.09 × 0.04 mm

Data collection

Bruker X8 APEXII 4K Kappa CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.942, T max = 0.977 27234 measured reflections 1477 independent reflections 1271 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.100 S = 1.10 1477 reflections 87 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.64 e Å−3 Δρmin = −0.92 e Å−3 Data collection: APEX2 (Bruker, 2010 ▶); cell refinement: SAIn class="Chemical">NT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811031710/zq2119sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811031710/zq2119Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zr(C6H4NO2)4]·2H2ODx = 1.743 Mg m3
Mr = 615.66Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P42/nCell parameters from 9933 reflections
Hall symbol: -P 4bcθ = 2.6–28.4°
a = 11.083 (5) ŵ = 0.54 mm1
c = 9.548 (5) ÅT = 100 K
V = 1172.8 (10) Å3Cuboid, colourless
Z = 20.12 × 0.09 × 0.04 mm
F(000) = 624
Bruker X8 APEXII 4K Kappa CCD diffractometer1477 independent reflections
Radiation source: fine-focus sealed tube1271 reflections with I > 2σ(I)
graphiteRint = 0.074
ω and φ scansθmax = 28.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −14→13
Tmin = 0.942, Tmax = 0.977k = −14→14
27234 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0415P)2 + 2.5407P] where P = (Fo2 + 2Fc2)/3
1477 reflections(Δ/σ)max < 0.001
87 parametersΔρmax = 0.64 e Å3
1 restraintΔρmin = −0.92 e Å3
Experimental. The intensity data were collected on a Bruker X8 ApexII 4 K Kappa CCD diffractometer using an exposure time of 40 s/frame. A total of 1709 frames were collected with a frame width of 0.5° covering up to θ = 28.40° with 99.5% completeness accomplished.
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zr10.250.250.750.01305 (15)
O10.41797 (14)0.31522 (14)0.82454 (18)0.01305 (15)
O20.56146 (18)0.33223 (18)0.9859 (2)0.0263 (4)
C30.4700 (2)0.1154 (2)1.1212 (3)0.0195 (5)
H30.54150.1441.16010.023*
N10.31289 (18)0.13671 (18)0.9505 (2)0.0157 (4)
C20.4174 (2)0.1737 (2)1.0089 (3)0.0169 (5)
C50.3088 (2)−0.0267 (2)1.1131 (3)0.0206 (5)
H50.2707−0.09591.14610.025*
C60.2603 (2)0.0372 (2)1.0016 (3)0.0178 (5)
H60.18910.010.9610.021*
C40.4143 (2)0.0137 (2)1.1748 (3)0.0222 (5)
H40.4473−0.02691.2510.027*
C10.4728 (2)0.2822 (2)0.9379 (3)0.0183 (5)
O030.250.750.3385 (4)0.0472 (9)
H03A0.274 (4)0.815 (3)0.396 (4)0.068 (15)*
U11U22U33U12U13U23
Zr10.01054 (17)0.01054 (17)0.0181 (2)000
O10.01054 (17)0.01054 (17)0.0181 (2)000
O20.0201 (9)0.0257 (10)0.0332 (11)−0.0070 (8)−0.0066 (8)0.0008 (8)
C30.0170 (11)0.0211 (12)0.0205 (12)0.0015 (9)−0.0014 (9)−0.0035 (10)
N10.0141 (9)0.0136 (9)0.0194 (10)−0.0005 (8)0.0000 (8)−0.0002 (8)
C20.0145 (11)0.0160 (11)0.0203 (12)0.0000 (9)0.0007 (9)−0.0030 (9)
C50.0221 (12)0.0178 (12)0.0220 (13)0.0026 (9)0.0043 (10)0.0027 (10)
C60.0158 (11)0.0154 (11)0.0223 (12)−0.0003 (9)0.0005 (9)0.0003 (9)
C40.0236 (13)0.0240 (13)0.0191 (13)0.0056 (10)0.0003 (10)0.0020 (10)
C10.0148 (11)0.0171 (11)0.0231 (12)−0.0001 (9)0.0006 (9)−0.0032 (9)
O030.059 (2)0.038 (2)0.045 (2)−0.0011 (18)00
Zr1—O1i2.1200 (18)C3—C41.384 (4)
Zr1—O12.1200 (18)C3—H30.93
Zr1—O1ii2.1200 (18)N1—C61.340 (3)
Zr1—O1iii2.1200 (18)N1—C21.349 (3)
Zr1—N1i2.393 (2)C2—C11.511 (4)
Zr1—N1ii2.393 (2)C5—C41.384 (4)
Zr1—N1iii2.393 (2)C5—C61.386 (4)
Zr1—N12.393 (2)C5—H50.93
O1—C11.294 (3)C6—H60.93
O2—C11.218 (3)C4—H40.93
C3—C21.381 (4)O03—H03A0.941 (19)
O1i—Zr1—O196.47 (3)N1i—Zr1—N1129.78 (7)
O1i—Zr1—O1ii96.47 (3)N1ii—Zr1—N173.76 (11)
O1—Zr1—O1ii140.77 (10)N1iii—Zr1—N1129.78 (7)
O1i—Zr1—O1iii140.77 (10)C1—O1—Zr1126.61 (15)
O1—Zr1—O1iii96.47 (3)C2—C3—C4118.7 (2)
O1ii—Zr1—O1iii96.47 (3)C2—C3—H3120.7
O1i—Zr1—N1i69.79 (7)C4—C3—H3120.7
O1—Zr1—N1i145.95 (7)C6—N1—C2118.2 (2)
O1ii—Zr1—N1i73.05 (7)C6—N1—Zr1126.65 (17)
O1iii—Zr1—N1i78.95 (7)C2—N1—Zr1114.94 (16)
O1i—Zr1—N1ii145.95 (7)N1—C2—C3122.8 (2)
O1—Zr1—N1ii78.95 (7)N1—C2—C1113.9 (2)
O1ii—Zr1—N1ii69.79 (7)C3—C2—C1123.3 (2)
O1iii—Zr1—N1ii73.05 (7)C4—C5—C6119.3 (2)
N1i—Zr1—N1ii129.78 (7)C4—C5—H5120.4
O1i—Zr1—N1iii78.95 (7)C6—C5—H5120.4
O1—Zr1—N1iii73.05 (7)N1—C6—C5122.1 (2)
O1ii—Zr1—N1iii145.95 (7)N1—C6—H6118.9
O1iii—Zr1—N1iii69.79 (7)C5—C6—H6118.9
N1i—Zr1—N1iii73.76 (11)C3—C4—C5118.9 (2)
N1ii—Zr1—N1iii129.78 (7)C3—C4—H4120.6
O1i—Zr1—N173.05 (7)C5—C4—H4120.6
O1—Zr1—N169.79 (7)O2—C1—O1124.4 (2)
O1ii—Zr1—N178.95 (7)O2—C1—C2121.4 (2)
O1iii—Zr1—N1145.95 (7)O1—C1—C2114.2 (2)
D—H···AD—HH···AD···AD—H···A
O03—H03A···O2iv0.94 (2)1.89 (2)2.829 (3)175 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O03—H03A⋯O2i0.94 (2)1.89 (2)2.829 (3)175 (5)

Symmetry code: (i) .

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